RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 KALRNO60229 2985 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 DOCK4Q8N1I0 1966 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 SHROOM3Q8TF72 1996 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 FAM170AA1A519 330 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 CFAP69A5D8W1 941 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 GOLGA6L10A6NI86 522 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 TTC34A8MYJ7 566 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 APOC4-APOC2K7ER74 178 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 MCF2LO15068 1137 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 SIN3BO75182 1162 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 SEC31AO94979 1220 aaKnown RBP7.98□□□□□ -1.13
VMP1-204ENST00000587259 TRUB2O95900 331 aaKnown RBP7.98□□□□□ -1.13
VMP1-204ENST00000587259 ZBED1O96006 694 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 F9P00740 461 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 APOC2P02655 101 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 DNTTP04053 509 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 ITGAVP06756 1048 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 LCP1P13796 627 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 JUPP14923 745 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 VAV1P15498 845 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 ITIH2P19823 946 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 TGM2P21980 687 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 KDELR1P24390 212 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 CD27P26842 260 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 NOS2P35228 1153 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 HSPA9P38646 679 aaKnown RBP7.98□□□□□ -1.13
VMP1-204ENST00000587259 GRIA4P48058 902 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 EIF3BP55884 814 aaKnown RBP7.98□□□□□ -1.13
VMP1-204ENST00000587259 C21orf59P57076 290 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 YWHAZP63104 245 aaKnown RBP7.98□□□□□ -1.13
VMP1-204ENST00000587259 TARDBPQ13148 414 aaKnown RBP eCLIP7.98□□□□□ -1.13
VMP1-204ENST00000587259 KRT81Q14533 505 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 SUZ12Q15022 739 aaKnown RBP7.98□□□□□ -1.13
VMP1-204ENST00000587259 EIF4HQ15056 248 aaKnown RBP7.98□□□□□ -1.13
VMP1-204ENST00000587259 SIX1Q15475 284 aaPredicted RBP7.98□□□□□ -1.13
VMP1-204ENST00000587259 TEAD4Q15561 434 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 SLC25A52Q3SY17 297 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 MPPE1Q53F39 396 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 HES3Q5TGS1 186 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 BSPRYQ5W0U4 402 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 KIAA0895LQ68EN5 471 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 NADSYN1Q6IA69 706 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 C4orf22Q6V702 233 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 BZW1Q7L1Q6 419 aaKnown RBP7.98□□□□□ -1.13
VMP1-204ENST00000587259 PCGF5Q86SE9 256 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 TADA2BQ86TJ2 420 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 MMAAQ8IVH4 418 aaKnown RBP7.98□□□□□ -1.13
VMP1-204ENST00000587259 CFAP52Q8N1V2 620 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 GALNT15Q8N3T1 639 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 EMC1Q8N766 993 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 FAM172AQ8WUF8 416 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 CASKIN2Q8WXE0 1202 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 CENPIQ92674 756 aaPredicted RBP7.98□□□□□ -1.13
VMP1-204ENST00000587259 PLD4Q96BZ4 506 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 TMA16Q96EY4 203 aaKnown RBP7.98□□□□□ -1.13
VMP1-204ENST00000587259 SNF8Q96H20 258 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 NAF1Q96HR8 494 aaKnown RBP7.98□□□□□ -1.13
VMP1-204ENST00000587259 CNDP2Q96KP4 475 aaKnown RBP7.98□□□□□ -1.13
VMP1-204ENST00000587259 PRICKLE1Q96MT3 831 aaPredicted RBP7.98□□□□□ -1.13
VMP1-204ENST00000587259 FERMT1Q9BQL6 677 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 NEUROG2Q9H2A3 272 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 ZWILCHQ9H900 591 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 POPDC2Q9HBU9 364 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 AASDHPPTQ9NRN7 309 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 FBXL12Q9NXK8 326 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 FAM53CQ9NYF3 392 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 DKK4Q9UBT3 224 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 ASIC3Q9UHC3 531 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 XPO7Q9UIA9 1087 aaKnown RBP7.98□□□□□ -1.13
VMP1-204ENST00000587259 INTS6Q9UL03 887 aaKnown RBP7.98□□□□□ -1.13
VMP1-204ENST00000587259 PLA2G4CQ9UP65 541 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 DRG1Q9Y295 367 aaKnown RBP7.98□□□□□ -1.13
VMP1-204ENST00000587259 CA5BQ9Y2D0 317 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 AK5Q9Y6K8 562 aa7.98□□□□□ -1.13
VMP1-204ENST00000587259 A0A1B0GTQ1 180 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 CAPN9O14815 690 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 NPC1O15118 1278 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 DAPK3O43293 454 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 LIASO43766 372 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 PCDHGA12O60330 932 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 SDC3O75056 442 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 RNASEH2AO75792 299 aaKnown RBP7.97□□□□□ -1.13
VMP1-204ENST00000587259 GJB6O95452 261 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 LDOC1O95751 146 aaPredicted RBP7.97□□□□□ -1.13
VMP1-204ENST00000587259 DLDP09622 509 aaKnown RBP7.97□□□□□ -1.13
VMP1-204ENST00000587259 MYF5P13349 255 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 ACTN2P35609 894 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 FLT3P36888 993 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 CSKP41240 450 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 PTGIRP43119 386 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 PSMD8P48556 350 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 CARSP49589 748 aaKnown RBP7.97□□□□□ -1.13
VMP1-204ENST00000587259 HARS2P49590 506 aaKnown RBP7.97□□□□□ -1.13
VMP1-204ENST00000587259 ACADVLP49748 655 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 STK19P49842 368 aaPredicted RBP7.97□□□□□ -1.13
VMP1-204ENST00000587259 PPP2CBP62714 309 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 RPS24P62847 133 aaKnown RBP7.97□□□□□ -1.13
VMP1-204ENST00000587259 PPP2CAP67775 309 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 MTA1Q13330 715 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 DPYSL2Q16555 572 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms