RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 DRICH1Q6PGQ1 229 aaPredicted RBP19.36■□□□□ 0.69
DDX39A-204ENST00000586558 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.36■□□□□ 0.69
DDX39A-204ENST00000586558 PARS2Q7L3T8 475 aaKnown RBP19.36■□□□□ 0.69
DDX39A-204ENST00000586558 CAMK1DQ8IU85 385 aa19.36■□□□□ 0.69
DDX39A-204ENST00000586558 CADM4Q8NFZ8 388 aa19.36■□□□□ 0.69
DDX39A-204ENST00000586558 ARRDC2Q8TBH0 407 aa19.36■□□□□ 0.69
DDX39A-204ENST00000586558 ACTRT1Q8TDG2 376 aa19.36■□□□□ 0.69
DDX39A-204ENST00000586558 COG1Q8WTW3 980 aa19.36■□□□□ 0.69
DDX39A-204ENST00000586558 ATG4AQ8WYN0 398 aa19.36■□□□□ 0.69
DDX39A-204ENST00000586558 ECHDC3Q96DC8 303 aa19.36■□□□□ 0.69
DDX39A-204ENST00000586558 ZC3H10Q96K80 434 aaKnown RBP19.36■□□□□ 0.69
DDX39A-204ENST00000586558 CEP41Q9BYV8 373 aa19.36■□□□□ 0.69
DDX39A-204ENST00000586558 SLC25A51Q9H1U9 297 aa19.36■□□□□ 0.69
DDX39A-204ENST00000586558 GLOD4Q9HC38 313 aa19.36■□□□□ 0.69
DDX39A-204ENST00000586558 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.36■□□□□ 0.69
DDX39A-204ENST00000586558 KLHL8Q9P2G9 620 aaPredicted RBP19.36■□□□□ 0.69
DDX39A-204ENST00000586558 DNPEPQ9ULA0 475 aa19.36■□□□□ 0.69
DDX39A-204ENST00000586558 TPX2Q9ULW0 747 aaKnown RBP19.36■□□□□ 0.69
DDX39A-204ENST00000586558 INVSQ9Y283 1065 aa19.36■□□□□ 0.69
DDX39A-204ENST00000586558 SHROOM3Q8TF72 1996 aa19.35■□□□□ 0.69
DDX39A-204ENST00000586558 LRRC72A6NJI9 287 aa19.35■□□□□ 0.69
DDX39A-204ENST00000586558 TRAFD1O14545 582 aaPredicted RBP19.35■□□□□ 0.69
DDX39A-204ENST00000586558 HTRA2O43464 458 aaPredicted RBP19.35■□□□□ 0.69
DDX39A-204ENST00000586558 PLRG1O43660 514 aaKnown RBP19.35■□□□□ 0.69
DDX39A-204ENST00000586558 GJB3O75712 270 aa19.35■□□□□ 0.69
DDX39A-204ENST00000586558 RHOBTB1O94844 696 aa19.35■□□□□ 0.69
DDX39A-204ENST00000586558 SEMA4FO95754 770 aa19.35■□□□□ 0.69
DDX39A-204ENST00000586558 ADRB3P13945 408 aa19.35■□□□□ 0.69
DDX39A-204ENST00000586558 ADPRHP54922 357 aa19.35■□□□□ 0.69
DDX39A-204ENST00000586558 DSC2Q02487 901 aa19.35■□□□□ 0.69
DDX39A-204ENST00000586558 RPL6Q02878 288 aaKnown RBP19.35■□□□□ 0.69
DDX39A-204ENST00000586558 ITPRIPL1Q6GPH6 555 aa19.35■□□□□ 0.69
DDX39A-204ENST00000586558 NYAP1Q6ZVC0 841 aa19.35■□□□□ 0.69
DDX39A-204ENST00000586558 LPCAT2Q7L5N7 544 aa19.35■□□□□ 0.69
DDX39A-204ENST00000586558 ZNF567Q8N184 647 aa19.35■□□□□ 0.69
DDX39A-204ENST00000586558 OR2T34Q8NGX1 318 aa19.35■□□□□ 0.69
DDX39A-204ENST00000586558 IMP4Q96G21 291 aaKnown RBP19.35■□□□□ 0.69
DDX39A-204ENST00000586558 USP29Q9HBJ7 922 aa19.35■□□□□ 0.69
DDX39A-204ENST00000586558 RAB23Q9ULC3 237 aa19.35■□□□□ 0.69
DDX39A-204ENST00000586558 SAR1BQ9Y6B6 198 aa19.35■□□□□ 0.69
DDX39A-204ENST00000586558 PLK4O00444 970 aa19.34■□□□□ 0.69
DDX39A-204ENST00000586558 AP1G1O43747 822 aa19.34■□□□□ 0.69
DDX39A-204ENST00000586558 OPHN1O60890 802 aa19.34■□□□□ 0.69
DDX39A-204ENST00000586558 BCKDHBP21953 392 aa19.34■□□□□ 0.69
DDX39A-204ENST00000586558 STIP1P31948 543 aaKnown RBP19.34■□□□□ 0.69
DDX39A-204ENST00000586558 ACSL1P33121 698 aa19.34■□□□□ 0.69
DDX39A-204ENST00000586558 POLR2LP62875 67 aaKnown RBP19.34■□□□□ 0.69
DDX39A-204ENST00000586558 NIPAL4Q0D2K0 466 aa19.34■□□□□ 0.69
DDX39A-204ENST00000586558 OASLQ15646 514 aaKnown RBP19.34■□□□□ 0.69
DDX39A-204ENST00000586558 PLK5Q496M5 336 aa19.34■□□□□ 0.69
DDX39A-204ENST00000586558 PMS2CLQ68D20 193 aa19.34■□□□□ 0.69
DDX39A-204ENST00000586558 PID1Q7Z2X4 250 aa19.34■□□□□ 0.69
DDX39A-204ENST00000586558 PAF1Q8N7H5 531 aa19.34■□□□□ 0.69
DDX39A-204ENST00000586558 FRMD1Q8N878 549 aa19.34■□□□□ 0.69
DDX39A-204ENST00000586558 OR14C36Q8NHC7 312 aa19.34■□□□□ 0.69
DDX39A-204ENST00000586558 C1orf54Q8WWF1 131 aa19.34■□□□□ 0.69
DDX39A-204ENST00000586558 FOXJ1Q92949 421 aa19.34■□□□□ 0.69
DDX39A-204ENST00000586558 RTP4Q96DX8 246 aa19.34■□□□□ 0.69
DDX39A-204ENST00000586558 SPATA13Q96N96 652 aa19.34■□□□□ 0.69
DDX39A-204ENST00000586558 GPR174Q9BXC1 333 aa19.34■□□□□ 0.69
DDX39A-204ENST00000586558 DUSP15Q9H1R2 295 aaPredicted RBP19.34■□□□□ 0.69
DDX39A-204ENST00000586558 C10orf88Q9H8K7 445 aa19.34■□□□□ 0.69
DDX39A-204ENST00000586558 PREBQ9HCU5 417 aa19.34■□□□□ 0.69
DDX39A-204ENST00000586558 TTC24A2A3L6 582 aaPredicted RBP19.33■□□□□ 0.68
DDX39A-204ENST00000586558 C5orf60A6NFR6 353 aa19.33■□□□□ 0.68
DDX39A-204ENST00000586558 UPK3BL1B0FP48 263 aa19.33■□□□□ 0.68
DDX39A-204ENST00000586558 UPK3BL2E5RIL1 263 aa19.33■□□□□ 0.68
DDX39A-204ENST00000586558 TUBB4AP04350 444 aa19.33■□□□□ 0.68
DDX39A-204ENST00000586558 ITGAVP06756 1048 aa19.33■□□□□ 0.68
DDX39A-204ENST00000586558 XPAP23025 273 aaPredicted RBP19.33■□□□□ 0.68
DDX39A-204ENST00000586558 CASQ1P31415 396 aa19.33■□□□□ 0.68
DDX39A-204ENST00000586558 NEK5Q6P3R8 708 aa19.33■□□□□ 0.68
DDX39A-204ENST00000586558 ZSCAN30Q86W11 494 aa19.33■□□□□ 0.68
DDX39A-204ENST00000586558 FAM71DQ8N9W8 422 aa19.33■□□□□ 0.68
DDX39A-204ENST00000586558 MS4A14Q96JA4 679 aa19.33■□□□□ 0.68
DDX39A-204ENST00000586558 NSMCE3Q96MG7 304 aa19.33■□□□□ 0.68
DDX39A-204ENST00000586558 PPP1R2P1Q96PQ5 205 aa19.33■□□□□ 0.68
DDX39A-204ENST00000586558 TMEM121Q9BTD3 319 aa19.33■□□□□ 0.68
DDX39A-204ENST00000586558 GBA3Q9H227 469 aa19.33■□□□□ 0.68
DDX39A-204ENST00000586558 VPS45Q9NRW7 570 aa19.33■□□□□ 0.68
DDX39A-204ENST00000586558 ZNF148Q9UQR1 794 aa19.33■□□□□ 0.68
DDX39A-204ENST00000586558 PCDHGC4Q9Y5F7 938 aa19.33■□□□□ 0.68
DDX39A-204ENST00000586558 RAI2Q9Y5P3 530 aa19.33■□□□□ 0.68
DDX39A-204ENST00000586558 FANCMQ8IYD8 2048 aa19.33■□□□□ 0.68
DDX39A-204ENST00000586558 EML5Q05BV3 1969 aa19.33■□□□□ 0.68
DDX39A-204ENST00000586558 GOLGA6L10A0A0M3HER8 536 aa19.32■□□□□ 0.68
DDX39A-204ENST00000586558 FANCGO15287 622 aa19.32■□□□□ 0.68
DDX39A-204ENST00000586558 GCATO75600 419 aa19.32■□□□□ 0.68
DDX39A-204ENST00000586558 MMP2P08253 660 aa19.32■□□□□ 0.68
DDX39A-204ENST00000586558 TIMP2P16035 220 aa19.32■□□□□ 0.68
DDX39A-204ENST00000586558 NFKB1P19838 968 aa19.32■□□□□ 0.68
DDX39A-204ENST00000586558 NFKBIAP25963 317 aa19.32■□□□□ 0.68
DDX39A-204ENST00000586558 CD68P34810 354 aaPredicted RBP19.32■□□□□ 0.68
DDX39A-204ENST00000586558 CD86P42081 329 aa19.32■□□□□ 0.68
DDX39A-204ENST00000586558 TAS2R38P59533 333 aa19.32■□□□□ 0.68
DDX39A-204ENST00000586558 RPL26P61254 145 aaKnown RBP19.32■□□□□ 0.68
DDX39A-204ENST00000586558 SKOR1P84550 965 aa19.32■□□□□ 0.68
DDX39A-204ENST00000586558 ELP6Q0PNE2 266 aa19.32■□□□□ 0.68
DDX39A-204ENST00000586558 TRAF2Q12933 501 aa19.32■□□□□ 0.68
DDX39A-204ENST00000586558 UGP2Q16851 508 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms