RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 DUSP3P51452 185 aaPredicted RBP17.17■□□□□ 0.34
TRIM47-203ENST00000586495 ZNF135P52742 658 aaPredicted RBP17.17■□□□□ 0.34
TRIM47-203ENST00000586495 PFN3P60673 137 aa17.17■□□□□ 0.34
TRIM47-203ENST00000586495 TARDBPQ13148 414 aaKnown RBP eCLIP17.17■□□□□ 0.34
TRIM47-203ENST00000586495 ZNF542PQ5EBM4 170 aa17.17■□□□□ 0.34
TRIM47-203ENST00000586495 BTN2A2Q8WVV5 523 aa17.17■□□□□ 0.34
TRIM47-203ENST00000586495 RFFLQ8WZ73 363 aa17.17■□□□□ 0.34
TRIM47-203ENST00000586495 ZNF653Q96CK0 615 aa17.17■□□□□ 0.34
TRIM47-203ENST00000586495 NAP1L5Q96NT1 182 aaPredicted RBP17.17■□□□□ 0.34
TRIM47-203ENST00000586495 SNRNP25Q9BV90 132 aaKnown RBP17.17■□□□□ 0.34
TRIM47-203ENST00000586495 USP29Q9HBJ7 922 aa17.17■□□□□ 0.34
TRIM47-203ENST00000586495 LHX3Q9UBR4 397 aa17.17■□□□□ 0.34
TRIM47-203ENST00000586495 RALYQ9UKM9 306 aaKnown RBP17.17■□□□□ 0.34
TRIM47-203ENST00000586495 GPSM3Q9Y4H4 160 aa17.17■□□□□ 0.34
TRIM47-203ENST00000586495 CSNK1G3Q9Y6M4 447 aa17.17■□□□□ 0.34
TRIM47-203ENST00000586495 ACACAQ13085 2346 aa17.16■□□□□ 0.34
TRIM47-203ENST00000586495 DDX3XO00571 662 aaKnown RBP eCLIP17.16■□□□□ 0.342e-7■□□□□ 9.6
TRIM47-203ENST00000586495 PRAMEF11O60813 436 aa17.16■□□□□ 0.34
TRIM47-203ENST00000586495 MMP20O60882 483 aa17.16■□□□□ 0.34
TRIM47-203ENST00000586495 GIMD1P0DJR0 217 aa17.16■□□□□ 0.34
TRIM47-203ENST00000586495 MYBL1P10243 752 aa17.16■□□□□ 0.34
TRIM47-203ENST00000586495 CKMT1AP12532 417 aa17.16■□□□□ 0.34
TRIM47-203ENST00000586495 TIMP2P16035 220 aa17.16■□□□□ 0.34
TRIM47-203ENST00000586495 THOP1P52888 689 aa17.16■□□□□ 0.34
TRIM47-203ENST00000586495 CLDN6P56747 220 aa17.16■□□□□ 0.34
TRIM47-203ENST00000586495 YPEL5P62699 121 aa17.16■□□□□ 0.34
TRIM47-203ENST00000586495 NR1I3Q14994 352 aa17.16■□□□□ 0.34
TRIM47-203ENST00000586495 IQCB1Q15051 598 aa17.16■□□□□ 0.34
TRIM47-203ENST00000586495 FIGNQ5HY92 759 aa17.16■□□□□ 0.34
TRIM47-203ENST00000586495 CFAP58Q5T655 872 aa17.16■□□□□ 0.34
TRIM47-203ENST00000586495 RFX8Q6ZV50 586 aa17.16■□□□□ 0.34
TRIM47-203ENST00000586495 VPS36Q86VN1 386 aa17.16■□□□□ 0.34
TRIM47-203ENST00000586495 FAM181AQ8N9Y4 354 aa17.16■□□□□ 0.34
TRIM47-203ENST00000586495 NETO2Q8NC67 525 aa17.16■□□□□ 0.34
TRIM47-203ENST00000586495 CENPTQ96BT3 561 aa17.16■□□□□ 0.34
TRIM47-203ENST00000586495 CELF6Q96J87 481 aaKnown RBP17.16■□□□□ 0.34
TRIM47-203ENST00000586495 EXOC2Q96KP1 924 aa17.16■□□□□ 0.34
TRIM47-203ENST00000586495 ZNF641Q96N77 438 aaPredicted RBP17.16■□□□□ 0.34
TRIM47-203ENST00000586495 TUBGCP5Q96RT8 1024 aa17.16■□□□□ 0.34
TRIM47-203ENST00000586495 SLC39A8Q9C0K1 460 aa17.16■□□□□ 0.34
TRIM47-203ENST00000586495 NRSN2Q9GZP1 204 aa17.16■□□□□ 0.34
TRIM47-203ENST00000586495 SUV39H2Q9H5I1 410 aa17.16■□□□□ 0.34
TRIM47-203ENST00000586495 PDFQ9HBH1 243 aa17.16■□□□□ 0.34
TRIM47-203ENST00000586495 CLCA2Q9UQC9 943 aa17.16■□□□□ 0.34
TRIM47-203ENST00000586495 FAM208BQ5VWN6 2430 aa17.16■□□□□ 0.34
TRIM47-203ENST00000586495 ZFHX4Q86UP3 3567 aa17.15■□□□□ 0.34
TRIM47-203ENST00000586495 J3KR12 359 aa17.15■□□□□ 0.34
TRIM47-203ENST00000586495 K7ESM1 405 aa17.15■□□□□ 0.34
TRIM47-203ENST00000586495 RIOK3O14730 519 aaKnown RBP17.15■□□□□ 0.34
TRIM47-203ENST00000586495 SPINT1O43278 529 aa17.15■□□□□ 0.34
TRIM47-203ENST00000586495 JUNDP17535 347 aa17.15■□□□□ 0.34
TRIM47-203ENST00000586495 ERCC2P18074 760 aa17.15■□□□□ 0.34
TRIM47-203ENST00000586495 MIPP30301 263 aa17.15■□□□□ 0.34
TRIM47-203ENST00000586495 PAPOLAP51003 745 aaKnown RBP17.15■□□□□ 0.34
TRIM47-203ENST00000586495 INSM1Q01101 510 aaPredicted RBP17.15■□□□□ 0.34
TRIM47-203ENST00000586495 ACAP1Q15027 740 aa17.15■□□□□ 0.34
TRIM47-203ENST00000586495 CA9Q16790 459 aa17.15■□□□□ 0.34
TRIM47-203ENST00000586495 TMEM52BQ4KMG9 183 aa17.15■□□□□ 0.34
TRIM47-203ENST00000586495 LRRC73Q5JTD7 316 aa17.15■□□□□ 0.34
TRIM47-203ENST00000586495 E4F1Q66K89 784 aaPredicted RBP17.15■□□□□ 0.34
TRIM47-203ENST00000586495 BRAT1Q6PJG6 821 aa17.15■□□□□ 0.34
TRIM47-203ENST00000586495 C19orf48Q6RUI8 117 aa17.15■□□□□ 0.34
TRIM47-203ENST00000586495 ARFGAP1Q8N6T3 406 aa17.15■□□□□ 0.34
TRIM47-203ENST00000586495 ZNF548Q8NEK5 533 aaPredicted RBP17.15■□□□□ 0.34
TRIM47-203ENST00000586495 APOLD1Q96LR9 279 aa17.15■□□□□ 0.34
TRIM47-203ENST00000586495 PEBP4Q96S96 227 aa17.15■□□□□ 0.34
TRIM47-203ENST00000586495 KCTD15Q96SI1 283 aaPredicted RBP17.15■□□□□ 0.34
TRIM47-203ENST00000586495 FUCA2Q9BTY2 467 aa17.15■□□□□ 0.34
TRIM47-203ENST00000586495 SCUBE2Q9NQ36 999 aa17.15■□□□□ 0.34
TRIM47-203ENST00000586495 NCKIPSDQ9NZQ3 722 aa17.15■□□□□ 0.34
TRIM47-203ENST00000586495 MYO1AQ9UBC5 1043 aa17.15■□□□□ 0.34
TRIM47-203ENST00000586495 BZW2Q9Y6E2 419 aaKnown RBP17.15■□□□□ 0.34
TRIM47-203ENST00000586495 AK5Q9Y6K8 562 aa17.15■□□□□ 0.34
TRIM47-203ENST00000586495 URB1O60287 2271 aaKnown RBP17.14■□□□□ 0.33
TRIM47-203ENST00000586495 INSIG1O15503 277 aa17.14■□□□□ 0.33
TRIM47-203ENST00000586495 AQP9O43315 295 aa17.14■□□□□ 0.33
TRIM47-203ENST00000586495 PALMO75781 387 aa17.14■□□□□ 0.33
TRIM47-203ENST00000586495 PIGNO95427 931 aa17.14■□□□□ 0.33
TRIM47-203ENST00000586495 MT-CO3P00414 261 aa17.14■□□□□ 0.33
TRIM47-203ENST00000586495 GP1BAP07359 652 aa17.14■□□□□ 0.33
TRIM47-203ENST00000586495 SKILP12757 684 aa17.14■□□□□ 0.33
TRIM47-203ENST00000586495 CSNK1DP48730 415 aa17.14■□□□□ 0.33
TRIM47-203ENST00000586495 HCAR3P49019 387 aa17.14■□□□□ 0.33
TRIM47-203ENST00000586495 RFTN1Q14699 578 aaPredicted RBP17.14■□□□□ 0.33
TRIM47-203ENST00000586495 RTP5Q14D33 572 aa17.14■□□□□ 0.33
TRIM47-203ENST00000586495 UGP2Q16851 508 aa17.14■□□□□ 0.33
TRIM47-203ENST00000586495 KLHL40Q2TBA0 621 aa17.14■□□□□ 0.33
TRIM47-203ENST00000586495 TDRD12Q587J7 1177 aaKnown RBP17.14■□□□□ 0.33
TRIM47-203ENST00000586495 PPP6R3Q5H9R7 873 aaPredicted RBP17.14■□□□□ 0.33
TRIM47-203ENST00000586495 ZCCHC8Q6NZY4 707 aaKnown RBP17.14■□□□□ 0.33
TRIM47-203ENST00000586495 ERAP2Q6P179 960 aa17.14■□□□□ 0.33
TRIM47-203ENST00000586495 LZTR1Q8N653 840 aa17.14■□□□□ 0.33
TRIM47-203ENST00000586495 WRAP53Q9BUR4 548 aaKnown RBP17.14■□□□□ 0.33
TRIM47-203ENST00000586495 TRIM7Q9C029 511 aa17.14■□□□□ 0.33
TRIM47-203ENST00000586495 ISCUQ9H1K1 167 aa17.14■□□□□ 0.33
TRIM47-203ENST00000586495 ZWILCHQ9H900 591 aa17.14■□□□□ 0.33
TRIM47-203ENST00000586495 SP110Q9HB58 689 aa17.14■□□□□ 0.33
TRIM47-203ENST00000586495 SPASTQ9UBP0 616 aa17.14■□□□□ 0.33
TRIM47-203ENST00000586495 DMXL2Q8TDJ6 3036 aa17.14■□□□□ 0.33
TRIM47-203ENST00000586495 APC2O95996 2303 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms