RNA–Protein interactions for RNA: ENST00000586080.1

R3HDM4-202, Transcript of R3H domain containing 4, humanhuman

TSL 4

Gene R3HDM4, Length 537 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-202ENST00000586080 GDF3Q9NR23 364 aa21.92■■□□□ 1.1
R3HDM4-202ENST00000586080 DKK3Q9UBP4 350 aa21.92■■□□□ 1.1
R3HDM4-202ENST00000586080 EPN1Q9Y6I3 576 aaPredicted RBP21.92■■□□□ 1.1
R3HDM4-202ENST00000586080 CACNA1EQ15878 2313 aa21.91■■□□□ 1.1
R3HDM4-202ENST00000586080 TLR4O00206 839 aa21.91■■□□□ 1.1
R3HDM4-202ENST00000586080 MUSKO15146 869 aa21.91■■□□□ 1.1
R3HDM4-202ENST00000586080 TSPAN6O43657 245 aa21.91■■□□□ 1.1
R3HDM4-202ENST00000586080 SH3BP5O60239 455 aa21.91■■□□□ 1.1
R3HDM4-202ENST00000586080 TIMP2P16035 220 aa21.91■■□□□ 1.1
R3HDM4-202ENST00000586080 COMTP21964 271 aa21.91■■□□□ 1.1
R3HDM4-202ENST00000586080 SERPINA4P29622 427 aa21.91■■□□□ 1.1
R3HDM4-202ENST00000586080 CDC25BP30305 580 aa21.91■■□□□ 1.1
R3HDM4-202ENST00000586080 CSNK1DP48730 415 aa21.91■■□□□ 1.1
R3HDM4-202ENST00000586080 CCT8P50990 548 aa21.91■■□□□ 1.1
R3HDM4-202ENST00000586080 BCL2L1Q07817 233 aa21.91■■□□□ 1.1
R3HDM4-202ENST00000586080 PAFAH1B3Q15102 231 aaKnown RBP21.91■■□□□ 1.1
R3HDM4-202ENST00000586080 TCEAL1Q15170 157 aa21.91■■□□□ 1.1
R3HDM4-202ENST00000586080 PRAMEF14Q5SWL7 426 aa21.91■■□□□ 1.1
R3HDM4-202ENST00000586080 NAXDQ8IW45 347 aa21.91■■□□□ 1.1
R3HDM4-202ENST00000586080 RHOT1Q8IXI2 618 aa21.91■■□□□ 1.1
R3HDM4-202ENST00000586080 MFSD2AQ8NA29 543 aa21.91■■□□□ 1.1
R3HDM4-202ENST00000586080 CXorf40AQ8TE69 158 aa21.91■■□□□ 1.1
R3HDM4-202ENST00000586080 SETD7Q8WTS6 366 aaKnown RBP21.91■■□□□ 1.1
R3HDM4-202ENST00000586080 FAF2Q96CS3 445 aa21.91■■□□□ 1.1
R3HDM4-202ENST00000586080 PSKH2Q96QS6 385 aa21.91■■□□□ 1.1
R3HDM4-202ENST00000586080 CACNA1AO00555 2505 aa21.9■■□□□ 1.1
R3HDM4-202ENST00000586080 IGLON5A6NGN9 336 aa21.9■■□□□ 1.1
R3HDM4-202ENST00000586080 UPK3BL1B0FP48 263 aa21.9■■□□□ 1.1
R3HDM4-202ENST00000586080 UPK3BL2E5RIL1 263 aa21.9■■□□□ 1.1
R3HDM4-202ENST00000586080 SPINT1O43278 529 aa21.9■■□□□ 1.1
R3HDM4-202ENST00000586080 BUB1BO60566 1050 aaPredicted RBP21.9■■□□□ 1.1
R3HDM4-202ENST00000586080 PAK4O96013 591 aaPredicted RBP21.9■■□□□ 1.1
R3HDM4-202ENST00000586080 ITIH2P19823 946 aa21.9■■□□□ 1.1
R3HDM4-202ENST00000586080 FECHP22830 423 aa21.9■■□□□ 1.1
R3HDM4-202ENST00000586080 CLDN2P57739 230 aa21.9■■□□□ 1.1
R3HDM4-202ENST00000586080 NXPH1P58417 271 aa21.9■■□□□ 1.1
R3HDM4-202ENST00000586080 SGCGQ13326 291 aa21.9■■□□□ 1.1
R3HDM4-202ENST00000586080 PIP4P1Q86T03 277 aa21.9■■□□□ 1.1
R3HDM4-202ENST00000586080 PQLC3Q8N755 202 aa21.9■■□□□ 1.1
R3HDM4-202ENST00000586080 ZNF641Q96N77 438 aaPredicted RBP21.9■■□□□ 1.1
R3HDM4-202ENST00000586080 CAMK1GQ96NX5 476 aa21.9■■□□□ 1.1
R3HDM4-202ENST00000586080 BAG1Q99933 345 aaPredicted RBP21.9■■□□□ 1.1
R3HDM4-202ENST00000586080 MAK16Q9BXY0 300 aaKnown RBP21.9■■□□□ 1.1
R3HDM4-202ENST00000586080 SLC17A9Q9BYT1 436 aa21.9■■□□□ 1.1
R3HDM4-202ENST00000586080 GOLPH3Q9H4A6 298 aa21.9■■□□□ 1.1
R3HDM4-202ENST00000586080 SPTBN2O15020 2390 aa21.9■■□□□ 1.1
R3HDM4-202ENST00000586080 PLXNA2O75051 1894 aa21.9■■□□□ 1.1
R3HDM4-202ENST00000586080 TTC24A2A3L6 582 aaPredicted RBP21.89■■□□□ 1.09
R3HDM4-202ENST00000586080 GOLGA6L6A8MZA4 724 aa21.89■■□□□ 1.09
R3HDM4-202ENST00000586080 MAGEC1O60732 1142 aa21.89■■□□□ 1.09
R3HDM4-202ENST00000586080 PEX11BO96011 259 aa21.89■■□□□ 1.09
R3HDM4-202ENST00000586080 ZNF883P0CG24 379 aa21.89■■□□□ 1.09
R3HDM4-202ENST00000586080 CEACAM1P13688 526 aa21.89■■□□□ 1.09
R3HDM4-202ENST00000586080 HSPA9P38646 679 aaKnown RBP21.89■■□□□ 1.09
R3HDM4-202ENST00000586080 GARSP41250 739 aaKnown RBP21.89■■□□□ 1.09
R3HDM4-202ENST00000586080 MMP13P45452 471 aa21.89■■□□□ 1.09
R3HDM4-202ENST00000586080 MAXP61244 160 aa21.89■■□□□ 1.09
R3HDM4-202ENST00000586080 AP1S1P61966 158 aa21.89■■□□□ 1.09
R3HDM4-202ENST00000586080 GBE1Q04446 702 aa21.89■■□□□ 1.09
R3HDM4-202ENST00000586080 NSUN2Q08J23 767 aaKnown RBP eCLIP21.89■■□□□ 1.09
R3HDM4-202ENST00000586080 GALNT2Q10471 571 aa21.89■■□□□ 1.09
R3HDM4-202ENST00000586080 FGL2Q14314 439 aa21.89■■□□□ 1.09
R3HDM4-202ENST00000586080 ZNF423Q2M1K9 1284 aa21.89■■□□□ 1.09
R3HDM4-202ENST00000586080 MARC1Q5VT66 337 aa21.89■■□□□ 1.09
R3HDM4-202ENST00000586080 LRRC38Q5VT99 294 aa21.89■■□□□ 1.09
R3HDM4-202ENST00000586080 BRAT1Q6PJG6 821 aa21.89■■□□□ 1.09
R3HDM4-202ENST00000586080 RAD9BQ6WBX8 426 aa21.89■■□□□ 1.09
R3HDM4-202ENST00000586080 IQCHQ86VS3 1027 aa21.89■■□□□ 1.09
R3HDM4-202ENST00000586080 ZSCAN30Q86W11 494 aa21.89■■□□□ 1.09
R3HDM4-202ENST00000586080 LRRC49Q8IUZ0 686 aa21.89■■□□□ 1.09
R3HDM4-202ENST00000586080 TMEM145Q8NBT3 493 aa21.89■■□□□ 1.09
R3HDM4-202ENST00000586080 RNF25Q96BH1 459 aaPredicted RBP21.89■■□□□ 1.09
R3HDM4-202ENST00000586080 KLHDC7BQ96G42 594 aa21.89■■□□□ 1.09
R3HDM4-202ENST00000586080 ZNF830Q96NB3 372 aaPredicted RBP21.89■■□□□ 1.09
R3HDM4-202ENST00000586080 RNF157Q96PX1 679 aa21.89■■□□□ 1.09
R3HDM4-202ENST00000586080 ELF4Q99607 663 aaPredicted RBP21.89■■□□□ 1.09
R3HDM4-202ENST00000586080 WRAP53Q9BUR4 548 aaKnown RBP21.89■■□□□ 1.09
R3HDM4-202ENST00000586080 SCUBE2Q9NQ36 999 aa21.89■■□□□ 1.09
R3HDM4-202ENST00000586080 DDX56Q9NY93 547 aaKnown RBP21.89■■□□□ 1.09
R3HDM4-202ENST00000586080 IMPACTQ9P2X3 320 aa21.89■■□□□ 1.09
R3HDM4-202ENST00000586080 PCDHB9Q9Y5E1 797 aa21.89■■□□□ 1.09
R3HDM4-202ENST00000586080 TSPAN11A1L157 253 aa21.88■■□□□ 1.09
R3HDM4-202ENST00000586080 AREL1O15033 823 aa21.88■■□□□ 1.09
R3HDM4-202ENST00000586080 MMP20O60882 483 aa21.88■■□□□ 1.09
R3HDM4-202ENST00000586080 NEBLO76041 1014 aa21.88■■□□□ 1.09
R3HDM4-202ENST00000586080 PRKCGP05129 697 aa21.88■■□□□ 1.09
R3HDM4-202ENST00000586080 THEGLP0DJG4 465 aa21.88■■□□□ 1.09
R3HDM4-202ENST00000586080 HADHBP55084 474 aaKnown RBP21.88■■□□□ 1.09
R3HDM4-202ENST00000586080 NAP1L1P55209 391 aaKnown RBP21.88■■□□□ 1.09
R3HDM4-202ENST00000586080 ELP6Q0PNE2 266 aa21.88■■□□□ 1.09
R3HDM4-202ENST00000586080 SUZ12Q15022 739 aaKnown RBP21.88■■□□□ 1.09
R3HDM4-202ENST00000586080 N4BP2L1Q5TBK1 243 aaPredicted RBP21.88■■□□□ 1.09
R3HDM4-202ENST00000586080 ERAP2Q6P179 960 aa21.88■■□□□ 1.09
R3HDM4-202ENST00000586080 PTAR1Q7Z6K3 402 aaPredicted RBP21.88■■□□□ 1.09
R3HDM4-202ENST00000586080 RFX6Q8HWS3 928 aa21.88■■□□□ 1.09
R3HDM4-202ENST00000586080 PGBD5Q8N414 524 aa21.88■■□□□ 1.09
R3HDM4-202ENST00000586080 CCNYQ8ND76 341 aa21.88■■□□□ 1.09
R3HDM4-202ENST00000586080 ACRBPQ8NEB7 543 aa21.88■■□□□ 1.09
R3HDM4-202ENST00000586080 LRRN4Q8WUT4 740 aa21.88■■□□□ 1.09
R3HDM4-202ENST00000586080 NT5MQ9NPB1 228 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms