RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 PSEN1P49768 467 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 RAB10P61026 200 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 PLEKHG4Q58EX7 1191 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 PM20D1Q6GTS8 502 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 OR13C4Q8NGS5 318 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 DDX50Q9BQ39 737 aaKnown RBP12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 CORO1BQ9BR76 489 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 APOL5Q9BWW9 433 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 PRKD2Q9BZL6 878 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 SLC25A51Q9H1U9 297 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 ABCG8Q9H221 673 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 PIDD1Q9HB75 910 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 MOCS1Q9NZB8 636 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 TAGLN3Q9UI15 199 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 PCDHB9Q9Y5E1 797 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 ARID2Q68CP9 1835 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 ZNF646O15015 1829 aaPredicted RBP12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 C1RP00736 705 aa12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 PROCP04070 461 aa12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 RECQLP46063 649 aaPredicted RBP12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 SPDYAQ5MJ70 313 aa12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 ZNF697Q5TEC3 545 aa12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 TMCO4Q5TGY1 634 aa12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 PTRHD1Q6GMV3 140 aaKnown RBP12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 ZNF781Q8N8C0 355 aa12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 SNX31Q8N9S9 440 aa12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 ST13P5Q8NFI4 369 aaPredicted RBP12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 APBB2Q92870 758 aa12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 USP13Q92995 863 aaPredicted RBP12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 FCRL5Q96RD9 977 aa12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 SSU72Q9NP77 194 aaKnown RBP12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 PNPLA8Q9NP80 782 aa12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 CASS4Q9NQ75 786 aa12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 ARL5AQ9Y689 179 aa12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 PAPPA2Q9BXP8 1791 aa12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 CYP11A1P05108 521 aa12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 CCND1P24385 295 aa12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 MSX2P35548 267 aaPredicted RBP12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 PLIN5Q00G26 463 aa12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 GPR17Q13304 367 aa12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 HNRNPDQ14103 355 aaKnown RBP12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 TCHHL1Q5QJ38 904 aaPredicted RBP12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 RBM20Q5T481 1227 aaKnown RBP12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 DEFB107AQ8IZN7 70 aa12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 LATS2Q9NRM7 1088 aa12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 SLC12A4Q9UP95 1085 aa12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 ZNF487B1APH4 448 aa12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 SNAP91O60641 907 aa12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 MAFKO60675 156 aa12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 HADHAP40939 763 aa12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 KPNA1P52294 538 aaPredicted RBP12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 GNA12Q03113 381 aa12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 SCAPQ12770 1279 aa12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 NAB1Q13506 487 aa12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 RBBP7Q16576 425 aa12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 RAB41Q5JT25 222 aa12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 TXNDC8Q6A555 127 aa12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 MFN1Q8IWA4 741 aa12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 FAM13CQ8NE31 585 aa12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 ACVR1CQ8NER5 493 aa12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 OR4K2Q8NGD2 314 aa12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 PPP1R2P1Q96PQ5 205 aa12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.56□□□□□ -0.42e-6■■□□□ 12.7
SMARCA4-208ENST00000585799 NCKIPSDQ9NZQ3 722 aa12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 CD274Q9NZQ7 290 aa12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 STOML1Q9UBI4 398 aa12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 USP3Q9Y6I4 520 aa12.56□□□□□ -0.4
SMARCA4-208ENST00000585799 PTPRFP10586 1907 aa12.55□□□□□ -0.4
SMARCA4-208ENST00000585799 A0A0U1RQS6 177 aa12.55□□□□□ -0.4
SMARCA4-208ENST00000585799 TRIM16O95361 564 aa12.55□□□□□ -0.4
SMARCA4-208ENST00000585799 S100BP04271 92 aaPredicted RBP12.55□□□□□ -0.4
SMARCA4-208ENST00000585799 POM121L1PQ3SYA9 428 aa12.55□□□□□ -0.4
SMARCA4-208ENST00000585799 SCUBE1Q8IWY4 988 aa12.55□□□□□ -0.4
SMARCA4-208ENST00000585799 FSTL5Q8N475 847 aaPredicted RBP12.55□□□□□ -0.4
SMARCA4-208ENST00000585799 C11orf84Q9BUA3 381 aaPredicted RBP12.55□□□□□ -0.4
SMARCA4-208ENST00000585799 PFDN4Q9NQP4 134 aa12.55□□□□□ -0.4
SMARCA4-208ENST00000585799 MRPL17Q9NRX2 175 aaKnown RBP12.55□□□□□ -0.4
SMARCA4-208ENST00000585799 PKP3Q9Y446 797 aa12.55□□□□□ -0.4
SMARCA4-208ENST00000585799 GJB3O75712 270 aa12.55□□□□□ -0.4
SMARCA4-208ENST00000585799 CCL5P13501 91 aa12.55□□□□□ -0.4
SMARCA4-208ENST00000585799 CYP4F8P98187 520 aa12.55□□□□□ -0.4
SMARCA4-208ENST00000585799 SGO1Q5FBB7 561 aa12.55□□□□□ -0.4
SMARCA4-208ENST00000585799 ARL13AQ5H913 290 aaPredicted RBP12.55□□□□□ -0.4
SMARCA4-208ENST00000585799 GPR158Q5T848 1215 aa12.55□□□□□ -0.4
SMARCA4-208ENST00000585799 SPATA24Q86W54 205 aa12.55□□□□□ -0.4
SMARCA4-208ENST00000585799 CDC26Q8NHZ8 85 aa12.55□□□□□ -0.4
SMARCA4-208ENST00000585799 C8orf48Q96LL4 319 aa12.55□□□□□ -0.4
SMARCA4-208ENST00000585799 CSNK1G1Q9HCP0 422 aa12.55□□□□□ -0.4
SMARCA4-208ENST00000585799 AGO1Q9UL18 857 aaKnown RBP12.55□□□□□ -0.4
SMARCA4-208ENST00000585799 AURKAO14965 403 aa12.55□□□□□ -0.4
SMARCA4-208ENST00000585799 CYBBP04839 570 aa12.55□□□□□ -0.4
SMARCA4-208ENST00000585799 APOA4P06727 396 aa12.55□□□□□ -0.4
SMARCA4-208ENST00000585799 PFKFB4Q16877 469 aa12.55□□□□□ -0.4
SMARCA4-208ENST00000585799 SCIMPQ6UWF3 145 aa12.55□□□□□ -0.4
SMARCA4-208ENST00000585799 ZNF598Q86UK7 904 aaKnown RBP12.55□□□□□ -0.4
SMARCA4-208ENST00000585799 IFNEQ86WN2 208 aa12.55□□□□□ -0.4
SMARCA4-208ENST00000585799 SNX32Q86XE0 403 aa12.55□□□□□ -0.4
SMARCA4-208ENST00000585799 LINC01599Q8WXQ3 324 aa12.55□□□□□ -0.4
SMARCA4-208ENST00000585799 PPWD1Q96BP3 646 aaKnown RBP12.55□□□□□ -0.4
SMARCA4-208ENST00000585799 CMTM5Q96DZ9 223 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms