RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 URI1O94763 535 aaPredicted RBP2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 AFPP02771 609 aaKnown RBP2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 PECAM1P16284 738 aaPredicted RBP2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 EPHA3P29320 983 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 GRK5P34947 590 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 ACTN2P35609 894 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 GGT5P36269 586 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 PPP1R2P41236 205 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 GPD2P43304 727 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 CDH15P55291 814 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 LILRA4P59901 499 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 HMGN5P82970 282 aaKnown RBP2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 SHC2P98077 582 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 MC1RQ01726 317 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 HLXQ14774 488 aaPredicted RBP2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 VEPH1Q14D04 833 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 PROSER3Q2NL68 480 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 WDR45BQ5MNZ6 344 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 DEPDC1Q5TB30 811 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 KAZNQ674X7 775 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 SLC30A6Q6NXT4 461 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 ANKRD16Q6P6B7 361 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 FAM47EQ6ZV65 393 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 ZNF365Q70YC5 407 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 MED25Q71SY5 747 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 GPRIN1Q7Z2K8 1008 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 ADGRG6Q86SQ4 1221 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 GPR65Q8IYL9 337 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 NCOA7Q8NI08 942 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 CENPIQ92674 756 aaPredicted RBP2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 ARSGQ96EG1 525 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 FEM1CQ96JP0 617 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 ZNF668Q96K58 619 aaPredicted RBP2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 MYOCQ99972 504 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 FAM118BQ9BPY3 351 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 FDXACB1Q9BRP7 624 aaPredicted RBP2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 ANP32EQ9BTT0 268 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 NAPBQ9H115 298 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 FAM124BQ9H5Z6 455 aaPredicted RBP2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 TTC12Q9H892 705 aaPredicted RBP2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 KCND3Q9UK17 655 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 DHDHQ9UQ10 334 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 SH2B3Q9UQQ2 575 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 GOLGB1Q14789 3259 aaKnown RBP2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 A0A1B0GTW7 788 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 hCG_1807616A0A1W2PRN6 198 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 TMEM8BA6NDV4 472 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 PGPEP1LA6NFU8 196 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 B4E171 279 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 KIF28PB7ZC32 967 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 STX16-NPEPL1H3BU86 382 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 STX16O14662 325 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 JUPP14923 745 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 GCSHP23434 173 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 CST5P28325 142 aaPredicted RBP2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 CD6P30203 668 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 THBS4P35443 961 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 NNMTP40261 264 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 TSPAN7P41732 249 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 BTDP43251 543 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 PTTG1IPP53801 180 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 IRX3P78415 501 aaPredicted RBP2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 ENPEPQ07075 957 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 SF3A3Q12874 501 aaKnown RBP eCLIP2.02□□□□□ -2.092e-6■■■■□ 26.1
SMCHD1-211ENST00000584897 COG2Q14746 738 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 TBRG1Q3YBR2 411 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 C17orf99Q6UX52 265 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 ZNF572Q7Z3I7 529 aaPredicted RBP2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 C11orf44Q8N8P7 122 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 FAM71DQ8N9W8 422 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 GLIS1Q8NBF1 620 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 RNF169Q8NCN4 708 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 NSMCE1Q8WV22 266 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 XAGE5Q8WWM1 108 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 FRAT1Q92837 279 aaPredicted RBP2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 ZKSCAN4Q969J2 545 aaPredicted RBP2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 SAT2Q96F10 170 aaPredicted RBP2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 APOPT1Q96IL0 206 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 THOC3Q96J01 351 aaKnown RBP2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 CCDC43Q96MW1 224 aaKnown RBP2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 PIGSQ96S52 555 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 SERINC2Q96SA4 455 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 AGAP2Q99490 1192 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 TRIM2Q9C040 744 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 ARHGAP39Q9C0H5 1083 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 LMAN2LQ9H0V9 348 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 SLC25A18Q9H1K4 315 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 JKAMPQ9P055 326 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 ANKFY1Q9P2R3 1169 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 DNAJB11Q9UBS4 358 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 BTBD3Q9Y2F9 522 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 GDAQ9Y2T3 454 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 MED16Q9Y2X0 877 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 USP15Q9Y4E8 981 aaPredicted RBP2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 SNX8Q9Y5X2 465 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 COL1A2P08123 1366 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 ZNF318Q5VUA4 2279 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 MYH8P13535 1937 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 MYH2Q9UKX2 1941 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 TRIOBPQ9H2D6 2365 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms