RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 TFR2Q9UP52 801 aa20.84■□□□□ 0.93
SRSF1-206ENST00000583741 A0A1W2PNU3 283 aaPredicted RBP20.83■□□□□ 0.93
SRSF1-206ENST00000583741 PJA2O43164 708 aa20.83■□□□□ 0.93
SRSF1-206ENST00000583741 FTLP02792 175 aaPredicted RBP20.83■□□□□ 0.93
SRSF1-206ENST00000583741 CDH5P33151 784 aaPredicted RBP20.83■□□□□ 0.93
SRSF1-206ENST00000583741 CXCR3P49682 368 aa20.83■□□□□ 0.93
SRSF1-206ENST00000583741 CLCN6P51797 869 aa20.83■□□□□ 0.93
SRSF1-206ENST00000583741 ERVPABLB-1P60509 514 aa20.83■□□□□ 0.93
SRSF1-206ENST00000583741 ARTNQ5T4W7 220 aa20.83■□□□□ 0.93
SRSF1-206ENST00000583741 ZNF662Q6ZS27 426 aa20.83■□□□□ 0.93
SRSF1-206ENST00000583741 SETD3Q86TU7 594 aaPredicted RBP20.83■□□□□ 0.93
SRSF1-206ENST00000583741 DNAAF5Q86Y56 855 aa20.83■□□□□ 0.93
SRSF1-206ENST00000583741 OR7D4Q8NG98 312 aa20.83■□□□□ 0.93
SRSF1-206ENST00000583741 IFI44Q8TCB0 444 aa20.83■□□□□ 0.93
SRSF1-206ENST00000583741 KCNE4Q8WWG9 221 aa20.83■□□□□ 0.93
SRSF1-206ENST00000583741 CPA5Q8WXQ8 436 aa20.83■□□□□ 0.93
SRSF1-206ENST00000583741 NPY6RQ99463 290 aa20.83■□□□□ 0.93
SRSF1-206ENST00000583741 TSGA10Q9BZW7 698 aa20.83■□□□□ 0.93
SRSF1-206ENST00000583741 SEMA4CQ9C0C4 833 aa20.83■□□□□ 0.93
SRSF1-206ENST00000583741 LACRTQ9GZZ8 138 aa20.83■□□□□ 0.93
SRSF1-206ENST00000583741 ABCG4Q9H172 646 aa20.83■□□□□ 0.93
SRSF1-206ENST00000583741 KLF15Q9UIH9 416 aa20.83■□□□□ 0.93
SRSF1-206ENST00000583741 BOD1L1Q8NFC6 3051 aa20.83■□□□□ 0.92
SRSF1-206ENST00000583741 ANKRD62A6NC57 917 aa20.82■□□□□ 0.92
SRSF1-206ENST00000583741 NEMP2A6NFY4 417 aa20.82■□□□□ 0.92
SRSF1-206ENST00000583741 KRT86O43790 486 aa20.82■□□□□ 0.92
SRSF1-206ENST00000583741 TGM2P21980 687 aa20.82■□□□□ 0.92
SRSF1-206ENST00000583741 UCNP55089 124 aa20.82■□□□□ 0.92
SRSF1-206ENST00000583741 HNRNPKP61978 463 aaKnown RBP eCLIP20.82■□□□□ 0.92
SRSF1-206ENST00000583741 ISXQ2M1V0 245 aa20.82■□□□□ 0.92
SRSF1-206ENST00000583741 BROXQ5VW32 411 aa20.82■□□□□ 0.92
SRSF1-206ENST00000583741 KYAT3Q6YP21 454 aaKnown RBP20.82■□□□□ 0.92
SRSF1-206ENST00000583741 MAPK15Q8TD08 544 aa20.82■□□□□ 0.92
SRSF1-206ENST00000583741 DUSP23Q9BVJ7 150 aa20.82■□□□□ 0.92
SRSF1-206ENST00000583741 SLC17A9Q9BYT1 436 aa20.82■□□□□ 0.92
SRSF1-206ENST00000583741 WDCPQ9H6R7 721 aa20.82■□□□□ 0.92
SRSF1-206ENST00000583741 USP29Q9HBJ7 922 aa20.82■□□□□ 0.92
SRSF1-206ENST00000583741 HS3ST3A1Q9Y663 406 aa20.82■□□□□ 0.92
SRSF1-206ENST00000583741 SPTY2D1-AS1A0A0U1RR47 76 aa20.81■□□□□ 0.92
SRSF1-206ENST00000583741 DRGXA6NNA5 263 aa20.81■□□□□ 0.92
SRSF1-206ENST00000583741 KLK10O43240 276 aa20.81■□□□□ 0.92
SRSF1-206ENST00000583741 LZTS3O60299 673 aaPredicted RBP20.81■□□□□ 0.92
SRSF1-206ENST00000583741 ZNF500O60304 480 aaPredicted RBP20.81■□□□□ 0.92
SRSF1-206ENST00000583741 PAK4O96013 591 aaPredicted RBP20.81■□□□□ 0.92
SRSF1-206ENST00000583741 TMEM253P0C7T8 217 aa20.81■□□□□ 0.92
SRSF1-206ENST00000583741 ADRB3P13945 408 aa20.81■□□□□ 0.92
SRSF1-206ENST00000583741 NME1P15531 152 aaKnown RBP20.81■□□□□ 0.92
SRSF1-206ENST00000583741 ARHGAP25P42331 645 aa20.81■□□□□ 0.92
SRSF1-206ENST00000583741 DUSP3P51452 185 aaPredicted RBP20.81■□□□□ 0.92
SRSF1-206ENST00000583741 NEK3P51956 506 aa20.81■□□□□ 0.92
SRSF1-206ENST00000583741 RHDQ02161 417 aa20.81■□□□□ 0.92
SRSF1-206ENST00000583741 CDKN3Q16667 212 aa20.81■□□□□ 0.92
SRSF1-206ENST00000583741 BRMS1LQ5PSV4 323 aa20.81■□□□□ 0.92
SRSF1-206ENST00000583741 TPRG1LQ5T0D9 272 aa20.81■□□□□ 0.92
SRSF1-206ENST00000583741 CTNNBL1Q8WYA6 563 aaPredicted RBP20.81■□□□□ 0.92
SRSF1-206ENST00000583741 PPP1R16AQ96I34 528 aa20.81■□□□□ 0.92
SRSF1-206ENST00000583741 VCPIP1Q96JH7 1222 aa20.81■□□□□ 0.92
SRSF1-206ENST00000583741 TRIM10Q9UDY6 481 aa20.81■□□□□ 0.92
SRSF1-206ENST00000583741 SATB2Q9UPW6 733 aa20.81■□□□□ 0.92
SRSF1-206ENST00000583741 CSF2P04141 144 aa20.81■□□□□ 0.92
SRSF1-206ENST00000583741 RECQLP46063 649 aaPredicted RBP20.81■□□□□ 0.92
SRSF1-206ENST00000583741 SULT1E1P49888 294 aa20.81■□□□□ 0.92
SRSF1-206ENST00000583741 RPS21P63220 83 aaKnown RBP20.81■□□□□ 0.92
SRSF1-206ENST00000583741 C3orf38Q5JPI3 329 aa20.81■□□□□ 0.92
SRSF1-206ENST00000583741 KIAA1161Q6NSJ0 714 aa20.81■□□□□ 0.92
SRSF1-206ENST00000583741 ZCCHC8Q6NZY4 707 aaKnown RBP20.81■□□□□ 0.92
SRSF1-206ENST00000583741 GUSBP11Q6P575 273 aa20.81■□□□□ 0.92
SRSF1-206ENST00000583741 PARGQ86W56 976 aa20.81■□□□□ 0.92
SRSF1-206ENST00000583741 PHF13Q86YI8 300 aaPredicted RBP20.81■□□□□ 0.92
SRSF1-206ENST00000583741 DCP2Q8IU60 420 aaKnown RBP20.81■□□□□ 0.92
SRSF1-206ENST00000583741 FAM174AQ8TBP5 190 aa20.81■□□□□ 0.92
SRSF1-206ENST00000583741 NT5C3BQ969T7 300 aa20.81■□□□□ 0.92
SRSF1-206ENST00000583741 TRIM11Q96F44 468 aa20.81■□□□□ 0.92
SRSF1-206ENST00000583741 SYNCQ9H7C4 482 aa20.81■□□□□ 0.92
SRSF1-206ENST00000583741 THSD1Q9NS62 852 aa20.81■□□□□ 0.92
SRSF1-206ENST00000583741 ZNF212Q9UDV6 495 aa20.81■□□□□ 0.92
SRSF1-206ENST00000583741 FADS3Q9Y5Q0 445 aa20.81■□□□□ 0.92
SRSF1-206ENST00000583741 IGLV3-10A0A075B6K4 115 aa20.8■□□□□ 0.92
SRSF1-206ENST00000583741 J3QKU1 62 aa20.8■□□□□ 0.92
SRSF1-206ENST00000583741 SPINT1O43278 529 aa20.8■□□□□ 0.92
SRSF1-206ENST00000583741 ZMPSTE24O75844 475 aa20.8■□□□□ 0.92
SRSF1-206ENST00000583741 ITGB7P26010 798 aa20.8■□□□□ 0.92
SRSF1-206ENST00000583741 OR1E1P30953 314 aa20.8■□□□□ 0.92
SRSF1-206ENST00000583741 SERPINH1P50454 418 aaKnown RBP20.8■□□□□ 0.92
SRSF1-206ENST00000583741 RNASE9P60153 205 aaKnown RBP20.8■□□□□ 0.92
SRSF1-206ENST00000583741 MON1BQ7L1V2 547 aa20.8■□□□□ 0.92
SRSF1-206ENST00000583741 PARS2Q7L3T8 475 aaKnown RBP20.8■□□□□ 0.92
SRSF1-206ENST00000583741 PGAP3Q96FM1 320 aaPredicted RBP20.8■□□□□ 0.92
SRSF1-206ENST00000583741 WBP1Q96G27 269 aa20.8■□□□□ 0.92
SRSF1-206ENST00000583741 ATXN7L3BQ96GX2 97 aa20.8■□□□□ 0.92
SRSF1-206ENST00000583741 TBCBQ99426 244 aa20.8■□□□□ 0.92
SRSF1-206ENST00000583741 KLF6Q99612 283 aaPredicted RBP20.8■□□□□ 0.92
SRSF1-206ENST00000583741 THAP2Q9H0W7 228 aa20.8■□□□□ 0.92
SRSF1-206ENST00000583741 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.8■□□□□ 0.92
SRSF1-206ENST00000583741 GUCA1BQ9UMX6 200 aa20.8■□□□□ 0.92
SRSF1-206ENST00000583741 CPED1A4D0V7 1026 aa20.79■□□□□ 0.92
SRSF1-206ENST00000583741 PMS2P1A4D2B8 440 aa20.79■□□□□ 0.92
SRSF1-206ENST00000583741 CASC3O15234 703 aaKnown RBP20.79■□□□□ 0.92
SRSF1-206ENST00000583741 MMP8P22894 467 aa20.79■□□□□ 0.92
SRSF1-206ENST00000583741 L1CAMP32004 1257 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms