RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 SOCS2O14508 198 aa5.85□□□□□ -1.47
SMARCE1-219ENST00000583294 USO1O60763 962 aaKnown RBP5.85□□□□□ -1.47
SMARCE1-219ENST00000583294 CLEC3BP05452 202 aa5.85□□□□□ -1.47
SMARCE1-219ENST00000583294 FGF2P09038 288 aa5.85□□□□□ -1.47
SMARCE1-219ENST00000583294 TMEM191BP0C7N4 346 aa5.85□□□□□ -1.47
SMARCE1-219ENST00000583294 MYZAPP0CAP1 466 aa5.85□□□□□ -1.47
SMARCE1-219ENST00000583294 SRD5A1P18405 259 aa5.85□□□□□ -1.47
SMARCE1-219ENST00000583294 PTGER1P34995 402 aa5.85□□□□□ -1.47
SMARCE1-219ENST00000583294 ARL1P40616 181 aaPredicted RBP5.85□□□□□ -1.47
SMARCE1-219ENST00000583294 GNAQP50148 359 aa5.85□□□□□ -1.47
SMARCE1-219ENST00000583294 SELENOVP59797 346 aa5.85□□□□□ -1.47
SMARCE1-219ENST00000583294 DCAF7P61962 342 aa5.85□□□□□ -1.47
SMARCE1-219ENST00000583294 RNPS1Q15287 305 aaKnown RBP5.85□□□□□ -1.47
SMARCE1-219ENST00000583294 HSPB2Q16082 182 aa5.85□□□□□ -1.47
SMARCE1-219ENST00000583294 PLEKHO1Q53GL0 409 aaPredicted RBP5.85□□□□□ -1.47
SMARCE1-219ENST00000583294 PRAMEF19Q5SWL8 479 aa5.85□□□□□ -1.47
SMARCE1-219ENST00000583294 C11orf87Q6NUJ2 197 aa5.85□□□□□ -1.47
SMARCE1-219ENST00000583294 CDC73Q6P1J9 531 aa5.85□□□□□ -1.47
SMARCE1-219ENST00000583294 GJC3Q8NFK1 279 aa5.85□□□□□ -1.47
SMARCE1-219ENST00000583294 GABPB2Q8TAK5 448 aaPredicted RBP5.85□□□□□ -1.47
SMARCE1-219ENST00000583294 ETNPPLQ8TBG4 499 aa5.85□□□□□ -1.47
SMARCE1-219ENST00000583294 TMEM18Q96B42 140 aa5.85□□□□□ -1.47
SMARCE1-219ENST00000583294 GFM1Q96RP9 751 aaKnown RBP5.85□□□□□ -1.47
SMARCE1-219ENST00000583294 TMEM79Q9BSE2 394 aa5.85□□□□□ -1.47
SMARCE1-219ENST00000583294 CDT1Q9H211 546 aa5.85□□□□□ -1.47
SMARCE1-219ENST00000583294 BRF2Q9HAW0 419 aa5.85□□□□□ -1.47
SMARCE1-219ENST00000583294 BLOC1S4Q9NUP1 217 aa5.85□□□□□ -1.47
SMARCE1-219ENST00000583294 NDRG3Q9UGV2 375 aa5.85□□□□□ -1.47
SMARCE1-219ENST00000583294 MKLN1Q9UL63 735 aa5.85□□□□□ -1.47
SMARCE1-219ENST00000583294 CARD8Q9Y2G2 431 aa5.85□□□□□ -1.47
SMARCE1-219ENST00000583294 FAM96BQ9Y3D0 163 aa5.85□□□□□ -1.47
SMARCE1-219ENST00000583294 PSAT1Q9Y617 370 aa5.85□□□□□ -1.47
SMARCE1-219ENST00000583294 ZNF521Q96K83 1311 aa5.84□□□□□ -1.47
SMARCE1-219ENST00000583294 GAGE12JA6NER3 117 aa5.84□□□□□ -1.47
SMARCE1-219ENST00000583294 MOSPD3O75425 235 aa5.84□□□□□ -1.47
SMARCE1-219ENST00000583294 PSG1P11464 419 aa5.84□□□□□ -1.47
SMARCE1-219ENST00000583294 CHMP24386 653 aa5.84□□□□□ -1.47
SMARCE1-219ENST00000583294 CXCR3P49682 368 aa5.84□□□□□ -1.47
SMARCE1-219ENST00000583294 RARSP54136 660 aaKnown RBP5.84□□□□□ -1.47
SMARCE1-219ENST00000583294 P2RX3P56373 397 aa5.84□□□□□ -1.47
SMARCE1-219ENST00000583294 SETQ01105 290 aaPredicted RBP5.84□□□□□ -1.47
SMARCE1-219ENST00000583294 TMEM115Q12893 351 aaPredicted RBP5.84□□□□□ -1.47
SMARCE1-219ENST00000583294 GRIK3Q13003 919 aa5.84□□□□□ -1.47
SMARCE1-219ENST00000583294 ERV3-1Q14264 604 aa5.84□□□□□ -1.47
SMARCE1-219ENST00000583294 GPR18Q14330 331 aa5.84□□□□□ -1.47
SMARCE1-219ENST00000583294 LPIN1Q14693 890 aa5.84□□□□□ -1.47
SMARCE1-219ENST00000583294 ARHGEF6Q15052 776 aa5.84□□□□□ -1.47
SMARCE1-219ENST00000583294 GSTA3Q16772 222 aa5.84□□□□□ -1.47
SMARCE1-219ENST00000583294 HIST2H2ACQ16777 129 aaPredicted RBP5.84□□□□□ -1.47
SMARCE1-219ENST00000583294 DUSP6Q16828 381 aa5.84□□□□□ -1.47
SMARCE1-219ENST00000583294 WDR78Q5VTH9 848 aa5.84□□□□□ -1.47
SMARCE1-219ENST00000583294 TXNDC8Q6A555 127 aa5.84□□□□□ -1.47
SMARCE1-219ENST00000583294 NCAPH2Q6IBW4 605 aa5.84□□□□□ -1.47
SMARCE1-219ENST00000583294 TMED8Q6PL24 325 aaPredicted RBP5.84□□□□□ -1.47
SMARCE1-219ENST00000583294 CPLX2Q6PUV4 134 aaKnown RBP5.84□□□□□ -1.47
SMARCE1-219ENST00000583294 C4orf50Q6ZRC1 276 aa5.84□□□□□ -1.47
SMARCE1-219ENST00000583294 Q6ZTK2 550 aa5.84□□□□□ -1.47
SMARCE1-219ENST00000583294 PIM3Q86V86 326 aa5.84□□□□□ -1.47
SMARCE1-219ENST00000583294 PALB2Q86YC2 1186 aa5.84□□□□□ -1.47
SMARCE1-219ENST00000583294 DENND6AQ8IWF6 608 aa5.84□□□□□ -1.47
SMARCE1-219ENST00000583294 RBFAQ8N0V3 343 aa5.84□□□□□ -1.47
SMARCE1-219ENST00000583294 C7orf57Q8NEG2 295 aa5.84□□□□□ -1.47
SMARCE1-219ENST00000583294 ADAMTS15Q8TE58 950 aa5.84□□□□□ -1.47
SMARCE1-219ENST00000583294 SLC35F5Q8WV83 523 aa5.84□□□□□ -1.47
SMARCE1-219ENST00000583294 PABPC5Q96DU9 382 aaKnown RBP5.84□□□□□ -1.47
SMARCE1-219ENST00000583294 PERPQ96FX8 193 aa5.84□□□□□ -1.47
SMARCE1-219ENST00000583294 BARD1Q99728 777 aaKnown RBP5.84□□□□□ -1.47
SMARCE1-219ENST00000583294 CHCHD6Q9BRQ6 235 aa5.84□□□□□ -1.47
SMARCE1-219ENST00000583294 CAPN7Q9Y6W3 813 aa5.84□□□□□ -1.47
SMARCE1-219ENST00000583294 LRRC53A6NM62 1247 aa5.83□□□□□ -1.48
SMARCE1-219ENST00000583294 I6L893 689 aaPredicted RBP5.83□□□□□ -1.48
SMARCE1-219ENST00000583294 RGS11O94810 467 aa5.83□□□□□ -1.48
SMARCE1-219ENST00000583294 CYP1A2P05177 515 aa5.83□□□□□ -1.48
SMARCE1-219ENST00000583294 CBSLP0DN79 551 aa5.83□□□□□ -1.48
SMARCE1-219ENST00000583294 IRF1P10914 325 aa5.83□□□□□ -1.48
SMARCE1-219ENST00000583294 PCNAP12004 261 aa5.83□□□□□ -1.48
SMARCE1-219ENST00000583294 DCTDP32321 178 aa5.83□□□□□ -1.48
SMARCE1-219ENST00000583294 CBSP35520 551 aa5.83□□□□□ -1.48
SMARCE1-219ENST00000583294 HDAC4P56524 1084 aa5.83□□□□□ -1.48
SMARCE1-219ENST00000583294 RPL7AP62424 266 aaKnown RBP5.83□□□□□ -1.48
SMARCE1-219ENST00000583294 LAMB3Q13751 1172 aa5.83□□□□□ -1.48
SMARCE1-219ENST00000583294 ESCO2Q56NI9 601 aa5.83□□□□□ -1.48
SMARCE1-219ENST00000583294 HYIQ5T013 277 aa5.83□□□□□ -1.48
SMARCE1-219ENST00000583294 DCAF12L2Q5VW00 463 aa5.83□□□□□ -1.48
SMARCE1-219ENST00000583294 PXKQ7Z7A4 578 aa5.83□□□□□ -1.48
SMARCE1-219ENST00000583294 NOXA1Q86UR1 476 aa5.83□□□□□ -1.48
SMARCE1-219ENST00000583294 BICD2Q8TD16 824 aa5.83□□□□□ -1.48
SMARCE1-219ENST00000583294 GPT2Q8TD30 523 aa5.83□□□□□ -1.48
SMARCE1-219ENST00000583294 APOLD1Q96LR9 279 aa5.83□□□□□ -1.48
SMARCE1-219ENST00000583294 H2AFJQ9BTM1 129 aa5.83□□□□□ -1.48
SMARCE1-219ENST00000583294 PLEKHA5Q9HAU0 1116 aa5.83□□□□□ -1.48
SMARCE1-219ENST00000583294 RNF7Q9UBF6 113 aa5.83□□□□□ -1.48
SMARCE1-219ENST00000583294 INTS6Q9UL03 887 aaKnown RBP5.83□□□□□ -1.48
SMARCE1-219ENST00000583294 LSM4Q9Y4Z0 139 aaKnown RBP5.83□□□□□ -1.48
SMARCE1-219ENST00000583294 SCINQ9Y6U3 715 aa5.83□□□□□ -1.48
SMARCE1-219ENST00000583294 TDRD9Q8NDG6 1382 aaKnown RBP5.82□□□□□ -1.48
SMARCE1-219ENST00000583294 PI4KAP2A4QPH2 592 aa5.82□□□□□ -1.48
SMARCE1-219ENST00000583294 EIF3CLB5ME19 914 aaKnown RBP5.82□□□□□ -1.48
SMARCE1-219ENST00000583294 NPIPB11E5RHQ5 1161 aa5.82□□□□□ -1.48
SMARCE1-219ENST00000583294 H3BNX3 289 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms