RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 ANKRD6Q9Y2G4 727 aa12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 REXO2Q9Y3B8 237 aaKnown RBP12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 SNX11Q9Y5W9 270 aa12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 ALG6Q9Y672 507 aa12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 DNAH14Q0VDD8 3507 aa12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 PRAMEF26H0Y7S4 382 aa12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 APOL1O14791 398 aa12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 WNT9AO14904 365 aa12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 VILLO15195 856 aa12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 PSTPIP1O43586 416 aa12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 TSPAN6O43657 245 aa12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 AP1G1O43747 822 aa12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 GJB3O75712 270 aa12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 PEX11BO96011 259 aa12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 MX2P20592 715 aa12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 SERPINA4P29622 427 aa12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 AKT2P31751 481 aa12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 HSPA9P38646 679 aaKnown RBP12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 GARSP41250 739 aaKnown RBP12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 MMP13P45452 471 aa12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 CSNK1DP48730 415 aa12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 VAV2P52735 878 aa12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 GSDMDP57764 484 aa12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 RPS21P63220 83 aaKnown RBP12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 BCL2L1Q07817 233 aa12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 NSUN2Q08J23 767 aaKnown RBP eCLIP12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 STAT4Q14765 748 aa12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 ZNF284Q2VY69 593 aa12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 HLA-BQ31612 363 aa12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 MARC1Q5VT66 337 aa12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 KIAA1161Q6NSJ0 714 aa12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 TIGD7Q6NT04 549 aaPredicted RBP12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 C11orf63Q6NUN7 778 aa12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 RFX6Q8HWS3 928 aa12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 TPCN2Q8NHX9 752 aa12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 FEM1CQ96JP0 617 aa12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 ZNF641Q96N77 438 aaPredicted RBP12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 IL21RQ9HBE5 538 aa12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 FZD3Q9NPG1 666 aa12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 DNAAF2Q9NVR5 837 aaKnown RBP12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 DKK3Q9UBP4 350 aa12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 GGT7Q9UJ14 662 aa12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 HEY1Q9Y5J3 304 aa12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 CACNA1EQ15878 2313 aa12.74□□□□□ -0.37
SMARCE1-218ENST00000582955 SHROOM3Q8TF72 1996 aa12.73□□□□□ -0.37
SMARCE1-218ENST00000582955 A0A1W2PR77 199 aa12.73□□□□□ -0.37
SMARCE1-218ENST00000582955 TTC24A2A3L6 582 aaPredicted RBP12.73□□□□□ -0.37
SMARCE1-218ENST00000582955 C3orf70A6NLC5 250 aaPredicted RBP12.73□□□□□ -0.37
SMARCE1-218ENST00000582955 ZNF487B1APH4 448 aa12.73□□□□□ -0.37
SMARCE1-218ENST00000582955 KCNK3O14649 394 aa12.73□□□□□ -0.37
SMARCE1-218ENST00000582955 TM4SF5O14894 197 aa12.73□□□□□ -0.37
SMARCE1-218ENST00000582955 NEBLO76041 1014 aa12.73□□□□□ -0.37
SMARCE1-218ENST00000582955 WNT1P04628 370 aa12.73□□□□□ -0.37
SMARCE1-218ENST00000582955 TIMP2P16035 220 aa12.73□□□□□ -0.37
SMARCE1-218ENST00000582955 HNRNPA2B1P22626 353 aaKnown RBP12.73□□□□□ -0.37
SMARCE1-218ENST00000582955 MAXP61244 160 aa12.73□□□□□ -0.37
SMARCE1-218ENST00000582955 AP1S1P61966 158 aa12.73□□□□□ -0.37
SMARCE1-218ENST00000582955 DYNLT1P63172 113 aa12.73□□□□□ -0.37
SMARCE1-218ENST00000582955 ITKQ08881 620 aa12.73□□□□□ -0.37
SMARCE1-218ENST00000582955 IFI16Q16666 785 aaKnown RBP12.73□□□□□ -0.37
SMARCE1-218ENST00000582955 TMEM259Q4ZIN3 620 aa12.73□□□□□ -0.37
SMARCE1-218ENST00000582955 PPM1JQ5JR12 505 aa12.73□□□□□ -0.37
SMARCE1-218ENST00000582955 VSIG1Q86XK7 387 aa12.73□□□□□ -0.37
SMARCE1-218ENST00000582955 TXLNBQ8N3L3 684 aa12.73□□□□□ -0.37
SMARCE1-218ENST00000582955 CCNYQ8ND76 341 aa12.73□□□□□ -0.37
SMARCE1-218ENST00000582955 CXorf40AQ8TE69 158 aa12.73□□□□□ -0.37
SMARCE1-218ENST00000582955 LRRN4Q8WUT4 740 aa12.73□□□□□ -0.37
SMARCE1-218ENST00000582955 DESI2Q9BSY9 194 aa12.73□□□□□ -0.37
SMARCE1-218ENST00000582955 SLC17A9Q9BYT1 436 aa12.73□□□□□ -0.37
SMARCE1-218ENST00000582955 LACRTQ9GZZ8 138 aa12.73□□□□□ -0.37
SMARCE1-218ENST00000582955 NT5MQ9NPB1 228 aa12.73□□□□□ -0.37
SMARCE1-218ENST00000582955 SCUBE2Q9NQ36 999 aa12.73□□□□□ -0.37
SMARCE1-218ENST00000582955 DTLQ9NZJ0 730 aa12.73□□□□□ -0.37
SMARCE1-218ENST00000582955 SALL4Q9UJQ4 1053 aa12.73□□□□□ -0.37
SMARCE1-218ENST00000582955 CA5BQ9Y2D0 317 aa12.73□□□□□ -0.37
SMARCE1-218ENST00000582955 FNDC3AQ9Y2H6 1198 aaKnown RBP12.73□□□□□ -0.37
SMARCE1-218ENST00000582955 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.73□□□□□ -0.37
SMARCE1-218ENST00000582955 TTLL3Q9Y4R7 772 aa12.73□□□□□ -0.37
SMARCE1-218ENST00000582955 DUSP10Q9Y6W6 482 aa12.73□□□□□ -0.37
SMARCE1-218ENST00000582955 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 TSPAN11A1L157 253 aa12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 IGLON5A6NGN9 336 aa12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 BTNL10A8MVZ5 291 aa12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 UPK3BL1B0FP48 263 aa12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 UPK3BL2E5RIL1 263 aa12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 TLR4O00206 839 aa12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 AREL1O15033 823 aa12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 SPINT1O43278 529 aa12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 MAGEC1O60732 1142 aa12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 PAK4O96013 591 aaPredicted RBP12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 ZFXP17010 805 aaPredicted RBP12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 ITIH2P19823 946 aa12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 CCNCP24863 283 aa12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 CTSKP43235 329 aa12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 SUOXP51687 545 aa12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 ELP6Q0PNE2 266 aa12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 KIF5AQ12840 1032 aa12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 SLC10A2Q12908 348 aaPredicted RBP12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 SGCGQ13326 291 aa12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 HNRNPDQ14103 355 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms