RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 NCKAP1Q9Y2A7 1128 aa15.7■□□□□ 0.1
SS18-216ENST00000580751 TTLL3Q9Y4R7 772 aa15.7■□□□□ 0.1
SS18-216ENST00000580751 MUSKO15146 869 aa15.69■□□□□ 0.1
SS18-216ENST00000580751 RAD51CO43502 376 aa15.69■□□□□ 0.1
SS18-216ENST00000580751 LILRB5O75023 590 aa15.69■□□□□ 0.1
SS18-216ENST00000580751 RPP40O75818 363 aaKnown RBP15.69■□□□□ 0.1
SS18-216ENST00000580751 JCHAINP01591 159 aa15.69■□□□□ 0.1
SS18-216ENST00000580751 CR2P20023 1033 aa15.69■□□□□ 0.1
SS18-216ENST00000580751 CES1P23141 567 aa15.69■□□□□ 0.1
SS18-216ENST00000580751 ITGB7P26010 798 aa15.69■□□□□ 0.1
SS18-216ENST00000580751 RGRP47804 291 aa15.69■□□□□ 0.1
SS18-216ENST00000580751 SCNN1BP51168 640 aa15.69■□□□□ 0.1
SS18-216ENST00000580751 PTK6Q13882 451 aa15.69■□□□□ 0.1
SS18-216ENST00000580751 ERCC6LQ2NKX8 1250 aa15.69■□□□□ 0.1
SS18-216ENST00000580751 MAP7D1Q3KQU3 841 aa15.69■□□□□ 0.1
SS18-216ENST00000580751 ALG1LQ6GMV1 187 aa15.69■□□□□ 0.1
SS18-216ENST00000580751 DARS2Q6PI48 645 aaKnown RBP15.69■□□□□ 0.1
SS18-216ENST00000580751 GDPD4Q6W3E5 623 aa15.69■□□□□ 0.1
SS18-216ENST00000580751 JAMLQ86YT9 394 aa15.69■□□□□ 0.1
SS18-216ENST00000580751 IFT20Q8IY31 132 aa15.69■□□□□ 0.1
SS18-216ENST00000580751 PGBD5Q8N414 524 aa15.69■□□□□ 0.1
SS18-216ENST00000580751 BBOF1Q8ND07 529 aa15.69■□□□□ 0.1
SS18-216ENST00000580751 HTR3CQ8WXA8 447 aa15.69■□□□□ 0.1
SS18-216ENST00000580751 ZNF419Q96HQ0 510 aaPredicted RBP15.69■□□□□ 0.1
SS18-216ENST00000580751 NUDCD1Q96RS6 583 aa15.69■□□□□ 0.1
SS18-216ENST00000580751 OMDQ99983 421 aa15.69■□□□□ 0.1
SS18-216ENST00000580751 ERP44Q9BS26 406 aa15.69■□□□□ 0.1
SS18-216ENST00000580751 ATP13A3Q9H7F0 1226 aa15.69■□□□□ 0.1
SS18-216ENST00000580751 PCDH9Q9HC56 1237 aa15.69■□□□□ 0.1
SS18-216ENST00000580751 SCUBE2Q9NQ36 999 aa15.69■□□□□ 0.1
SS18-216ENST00000580751 FBXL12Q9NXK8 326 aa15.69■□□□□ 0.1
SS18-216ENST00000580751 SARDHQ9UL12 918 aa15.69■□□□□ 0.1
SS18-216ENST00000580751 CYP8B1Q9UNU6 501 aa15.69■□□□□ 0.1
SS18-216ENST00000580751 NEU2Q9Y3R4 380 aa15.69■□□□□ 0.1
SS18-216ENST00000580751 PLXND1Q9Y4D7 1925 aa15.68■□□□□ 0.1
SS18-216ENST00000580751 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.68■□□□□ 0.1
SS18-216ENST00000580751 C5orf60A6NFR6 353 aa15.68■□□□□ 0.1
SS18-216ENST00000580751 BHMG1C9JSJ3 638 aaPredicted RBP15.68■□□□□ 0.1
SS18-216ENST00000580751 SLC7A4O43246 635 aa15.68■□□□□ 0.1
SS18-216ENST00000580751 RNASEH2AO75792 299 aaKnown RBP15.68■□□□□ 0.1
SS18-216ENST00000580751 STK10O94804 968 aaKnown RBP15.68■□□□□ 0.1
SS18-216ENST00000580751 HLA-DQB2P05538 268 aa15.68■□□□□ 0.1
SS18-216ENST00000580751 UGT2B4P06133 528 aa15.68■□□□□ 0.1
SS18-216ENST00000580751 PTPN3P26045 913 aa15.68■□□□□ 0.1
SS18-216ENST00000580751 TNFRSF8P28908 595 aa15.68■□□□□ 0.1
SS18-216ENST00000580751 SERPINA4P29622 427 aa15.68■□□□□ 0.1
SS18-216ENST00000580751 GKP32189 559 aa15.68■□□□□ 0.1
SS18-216ENST00000580751 ACTN2P35609 894 aa15.68■□□□□ 0.1
SS18-216ENST00000580751 MAXP61244 160 aa15.68■□□□□ 0.1
SS18-216ENST00000580751 ITKQ08881 620 aa15.68■□□□□ 0.1
SS18-216ENST00000580751 ZBTB17Q13105 803 aa15.68■□□□□ 0.1
SS18-216ENST00000580751 SNX1Q13596 522 aa15.68■□□□□ 0.1
SS18-216ENST00000580751 CUL1Q13616 776 aa15.68■□□□□ 0.1
SS18-216ENST00000580751 PPP1R7Q15435 360 aa15.68■□□□□ 0.1
SS18-216ENST00000580751 P3H1Q32P28 736 aa15.68■□□□□ 0.1
SS18-216ENST00000580751 ZNF805Q5CZA5 627 aa15.68■□□□□ 0.1
SS18-216ENST00000580751 SLC36A4Q6YBV0 504 aa15.68■□□□□ 0.1
SS18-216ENST00000580751 GSTA5Q7RTV2 222 aa15.68■□□□□ 0.1
SS18-216ENST00000580751 AADATQ8N5Z0 425 aa15.68■□□□□ 0.1
SS18-216ENST00000580751 RLN3Q8WXF3 142 aa15.68■□□□□ 0.1
SS18-216ENST00000580751 ZNF641Q96N77 438 aaPredicted RBP15.68■□□□□ 0.1
SS18-216ENST00000580751 FAM118BQ9BPY3 351 aa15.68■□□□□ 0.1
SS18-216ENST00000580751 USP29Q9HBJ7 922 aa15.68■□□□□ 0.1
SS18-216ENST00000580751 RAB21Q9UL25 225 aa15.68■□□□□ 0.1
SS18-216ENST00000580751 ATP8A1Q9Y2Q0 1164 aa15.68■□□□□ 0.1
SS18-216ENST00000580751 FANCMQ8IYD8 2048 aa15.67■□□□□ 0.1
SS18-216ENST00000580751 IGHV1OR15-9A0A0B4J2B8 117 aa15.67■□□□□ 0.1
SS18-216ENST00000580751 A0A1W2PP55 124 aa15.67■□□□□ 0.1
SS18-216ENST00000580751 SMAPO00193 183 aa15.67■□□□□ 0.1
SS18-216ENST00000580751 RNF103O00237 685 aa15.67■□□□□ 0.1
SS18-216ENST00000580751 INSIG1O15503 277 aa15.67■□□□□ 0.1
SS18-216ENST00000580751 TTI1O43156 1089 aa15.67■□□□□ 0.1
SS18-216ENST00000580751 GCATO75600 419 aa15.67■□□□□ 0.1
SS18-216ENST00000580751 HEXIM1O94992 359 aaKnown RBP15.67■□□□□ 0.1
SS18-216ENST00000580751 RBL1P28749 1068 aa15.67■□□□□ 0.1
SS18-216ENST00000580751 CD6P30203 668 aa15.67■□□□□ 0.1
SS18-216ENST00000580751 DRD3P35462 400 aa15.67■□□□□ 0.1
SS18-216ENST00000580751 KCNJ1P48048 391 aa15.67■□□□□ 0.1
SS18-216ENST00000580751 BCL2L1Q07817 233 aa15.67■□□□□ 0.1
SS18-216ENST00000580751 WASHC5Q12768 1159 aa15.67■□□□□ 0.1
SS18-216ENST00000580751 POM121L1PQ3SYA9 428 aa15.67■□□□□ 0.1
SS18-216ENST00000580751 TEX44Q53QW1 395 aa15.67■□□□□ 0.1
SS18-216ENST00000580751 CFAP58Q5T655 872 aa15.67■□□□□ 0.1
SS18-216ENST00000580751 DUPD1Q68J44 220 aa15.67■□□□□ 0.1
SS18-216ENST00000580751 NCEH1Q6PIU2 408 aa15.67■□□□□ 0.1
SS18-216ENST00000580751 B4GALNT4Q76KP1 1039 aa15.67■□□□□ 0.1
SS18-216ENST00000580751 ERN2Q76MJ5 926 aaKnown RBP15.67■□□□□ 0.1
SS18-216ENST00000580751 HDDC3Q8N4P3 179 aa15.67■□□□□ 0.1
SS18-216ENST00000580751 HCAR2Q8TDS4 363 aa15.67■□□□□ 0.1
SS18-216ENST00000580751 ATOH1Q92858 354 aaPredicted RBP15.67■□□□□ 0.1
SS18-216ENST00000580751 FAM131CQ96AQ9 280 aa15.67■□□□□ 0.1
SS18-216ENST00000580751 SEMA3CQ99985 751 aa15.67■□□□□ 0.1
SS18-216ENST00000580751 HDAC8Q9BY41 377 aa15.67■□□□□ 0.1
SS18-216ENST00000580751 BTBD1Q9H0C5 482 aa15.67■□□□□ 0.1
SS18-216ENST00000580751 ANKZF1Q9H8Y5 726 aa15.67■□□□□ 0.1
SS18-216ENST00000580751 SGK2Q9HBY8 427 aa15.67■□□□□ 0.1
SS18-216ENST00000580751 CD93Q9NPY3 652 aa15.67■□□□□ 0.1
SS18-216ENST00000580751 GDF3Q9NR23 364 aa15.67■□□□□ 0.1
SS18-216ENST00000580751 FAM114A2Q9NRY5 505 aa15.67■□□□□ 0.1
SS18-216ENST00000580751 KLHL8Q9P2G9 620 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms