RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 VPS36Q86VN1 386 aa19.46■□□□□ 0.71
CDKN2A-213ENST00000579122 ZNF677Q86XU0 584 aa19.46■□□□□ 0.71
CDKN2A-213ENST00000579122 EPS8L1Q8TE68 723 aa19.46■□□□□ 0.71
CDKN2A-213ENST00000579122 C1QTNF7Q9BXJ2 289 aa19.46■□□□□ 0.71
CDKN2A-213ENST00000579122 STK33Q9BYT3 514 aa19.46■□□□□ 0.71
CDKN2A-213ENST00000579122 PNMA8BQ9ULN7 279 aaPredicted RBP19.46■□□□□ 0.71
CDKN2A-213ENST00000579122 NEU3Q9UQ49 428 aa19.46■□□□□ 0.71
CDKN2A-213ENST00000579122 CHD5Q8TDI0 1954 aa19.45■□□□□ 0.7
CDKN2A-213ENST00000579122 ZSCAN5CA6NGD5 496 aaPredicted RBP19.45■□□□□ 0.7
CDKN2A-213ENST00000579122 F8VZ95 297 aa19.45■□□□□ 0.7
CDKN2A-213ENST00000579122 FAM72CH0Y354 149 aa19.45■□□□□ 0.7
CDKN2A-213ENST00000579122 K7ENP7 123 aa19.45■□□□□ 0.7
CDKN2A-213ENST00000579122 YY2O15391 372 aa19.45■□□□□ 0.7
CDKN2A-213ENST00000579122 KDELR3O43731 214 aa19.45■□□□□ 0.7
CDKN2A-213ENST00000579122 TM7SF2O76062 418 aa19.45■□□□□ 0.7
CDKN2A-213ENST00000579122 SDC4P31431 198 aa19.45■□□□□ 0.7
CDKN2A-213ENST00000579122 CDO1Q16878 200 aa19.45■□□□□ 0.7
CDKN2A-213ENST00000579122 C15orf59Q2T9L4 293 aaPredicted RBP19.45■□□□□ 0.7
CDKN2A-213ENST00000579122 CCDC14Q49A88 953 aa19.45■□□□□ 0.7
CDKN2A-213ENST00000579122 RAB6CQ53S08 254 aa19.45■□□□□ 0.7
CDKN2A-213ENST00000579122 FAXCQ5TGI0 409 aa19.45■□□□□ 0.7
CDKN2A-213ENST00000579122 FAM72AQ5TYM5 149 aa19.45■□□□□ 0.7
CDKN2A-213ENST00000579122 FAM72DQ6L9T8 149 aa19.45■□□□□ 0.7
CDKN2A-213ENST00000579122 ESRP1Q6NXG1 681 aaKnown RBP19.45■□□□□ 0.7
CDKN2A-213ENST00000579122 INO80CQ6PI98 192 aaPredicted RBP19.45■□□□□ 0.7
CDKN2A-213ENST00000579122 FAM72BQ86X60 149 aa19.45■□□□□ 0.7
CDKN2A-213ENST00000579122 CXorf40AQ8TE69 158 aa19.45■□□□□ 0.7
CDKN2A-213ENST00000579122 RXFP2Q8WXD0 754 aa19.45■□□□□ 0.7
CDKN2A-213ENST00000579122 TBC1D31Q96DN5 1066 aa19.45■□□□□ 0.7
CDKN2A-213ENST00000579122 GDAP1L1Q96MZ0 367 aa19.45■□□□□ 0.7
CDKN2A-213ENST00000579122 CCDC3Q9BQI4 270 aa19.45■□□□□ 0.7
CDKN2A-213ENST00000579122 SEMA4CQ9C0C4 833 aa19.45■□□□□ 0.7
CDKN2A-213ENST00000579122 CLPBQ9H078 707 aa19.45■□□□□ 0.7
CDKN2A-213ENST00000579122 RAB6CQ9H0N0 254 aa19.45■□□□□ 0.7
CDKN2A-213ENST00000579122 CLSTN2Q9H4D0 955 aa19.45■□□□□ 0.7
CDKN2A-213ENST00000579122 PADI4Q9UM07 663 aa19.45■□□□□ 0.7
CDKN2A-213ENST00000579122 CCDC187A0A096LP49 1063 aa19.44■□□□□ 0.7
CDKN2A-213ENST00000579122 MMP20O60882 483 aa19.44■□□□□ 0.7
CDKN2A-213ENST00000579122 LRIG2O94898 1065 aa19.44■□□□□ 0.7
CDKN2A-213ENST00000579122 C6P13671 934 aa19.44■□□□□ 0.7
CDKN2A-213ENST00000579122 TSHRP16473 764 aa19.44■□□□□ 0.7
CDKN2A-213ENST00000579122 MMP8P22894 467 aa19.44■□□□□ 0.7
CDKN2A-213ENST00000579122 EIF4A3P38919 411 aaKnown RBP19.44■□□□□ 0.7
CDKN2A-213ENST00000579122 PTPN9P43378 593 aa19.44■□□□□ 0.7
CDKN2A-213ENST00000579122 PDX1P52945 283 aa19.44■□□□□ 0.7
CDKN2A-213ENST00000579122 PPARDQ03181 441 aa19.44■□□□□ 0.7
CDKN2A-213ENST00000579122 RAD51Q06609 339 aa19.44■□□□□ 0.7
CDKN2A-213ENST00000579122 SPIDRQ14159 915 aa19.44■□□□□ 0.7
CDKN2A-213ENST00000579122 LY6DQ14210 128 aa19.44■□□□□ 0.7
CDKN2A-213ENST00000579122 CCDC183Q5T5S1 534 aa19.44■□□□□ 0.7
CDKN2A-213ENST00000579122 ATXN7L2Q5T6C5 722 aaPredicted RBP19.44■□□□□ 0.7
CDKN2A-213ENST00000579122 FOXR1Q6PIV2 292 aa19.44■□□□□ 0.7
CDKN2A-213ENST00000579122 LEKR1Q6ZMV7 388 aa19.44■□□□□ 0.7
CDKN2A-213ENST00000579122 STRADAQ7RTN6 431 aa19.44■□□□□ 0.7
CDKN2A-213ENST00000579122 FSTL5Q8N475 847 aaPredicted RBP19.44■□□□□ 0.7
CDKN2A-213ENST00000579122 TP53I13Q8NBR0 393 aaPredicted RBP19.44■□□□□ 0.7
CDKN2A-213ENST00000579122 CASKIN2Q8WXE0 1202 aa19.44■□□□□ 0.7
CDKN2A-213ENST00000579122 CENPIQ92674 756 aaPredicted RBP19.44■□□□□ 0.7
CDKN2A-213ENST00000579122 EPAS1Q99814 870 aa19.44■□□□□ 0.7
CDKN2A-213ENST00000579122 TTYH3Q9C0H2 523 aa19.44■□□□□ 0.7
CDKN2A-213ENST00000579122 NUP62CLQ9H1M0 184 aa19.44■□□□□ 0.7
CDKN2A-213ENST00000579122 MBNL1Q9NR56 388 aaKnown RBP19.44■□□□□ 0.7
CDKN2A-213ENST00000579122 TMEM63CQ9P1W3 806 aa19.44■□□□□ 0.7
CDKN2A-213ENST00000579122 DKK3Q9UBP4 350 aa19.44■□□□□ 0.7
CDKN2A-213ENST00000579122 MFHAS1Q9Y4C4 1052 aa19.44■□□□□ 0.7
CDKN2A-213ENST00000579122 COL6A6A6NMZ7 2263 aa19.44■□□□□ 0.7
CDKN2A-213ENST00000579122 PMS2P1A4D2B8 440 aa19.43■□□□□ 0.7
CDKN2A-213ENST00000579122 C2CD4BA6NLJ0 364 aa19.43■□□□□ 0.7
CDKN2A-213ENST00000579122 PES1O00541 588 aaKnown RBP19.43■□□□□ 0.7
CDKN2A-213ENST00000579122 NTN3O00634 580 aaPredicted RBP19.43■□□□□ 0.7
CDKN2A-213ENST00000579122 BUB1O43683 1085 aa19.43■□□□□ 0.7
CDKN2A-213ENST00000579122 TMCC1O94876 653 aa19.43■□□□□ 0.7
CDKN2A-213ENST00000579122 TNFSF15O95150 251 aa19.43■□□□□ 0.7
CDKN2A-213ENST00000579122 CYP1A1P04798 512 aaPredicted RBP19.43■□□□□ 0.7
CDKN2A-213ENST00000579122 ITGA2BP08514 1039 aa19.43■□□□□ 0.7
CDKN2A-213ENST00000579122 PLEKP08567 350 aaPredicted RBP19.43■□□□□ 0.7
CDKN2A-213ENST00000579122 BLKP51451 505 aa19.43■□□□□ 0.7
CDKN2A-213ENST00000579122 LRRC73Q5JTD7 316 aa19.43■□□□□ 0.7
CDKN2A-213ENST00000579122 CCDC81Q6ZN84 652 aa19.43■□□□□ 0.7
CDKN2A-213ENST00000579122 LIN37Q96GY3 246 aaPredicted RBP19.43■□□□□ 0.7
CDKN2A-213ENST00000579122 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.43■□□□□ 0.7
CDKN2A-213ENST00000579122 MAGEB5Q9BZ81 275 aa19.43■□□□□ 0.7
CDKN2A-213ENST00000579122 NOCTQ9UK39 431 aaKnown RBP19.43■□□□□ 0.7
CDKN2A-213ENST00000579122 TMEM110-MUSTN1A8MSY1 372 aa19.42■□□□□ 0.7
CDKN2A-213ENST00000579122 B8ZZF3 427 aa19.42■□□□□ 0.7
CDKN2A-213ENST00000579122 CASC3O15234 703 aaKnown RBP19.42■□□□□ 0.7
CDKN2A-213ENST00000579122 IGSF6O95976 241 aa19.42■□□□□ 0.7
CDKN2A-213ENST00000579122 TIMP2P16035 220 aa19.42■□□□□ 0.7
CDKN2A-213ENST00000579122 ERCC5P28715 1186 aaPredicted RBP19.42■□□□□ 0.7
CDKN2A-213ENST00000579122 PEX5P50542 639 aa19.42■□□□□ 0.7
CDKN2A-213ENST00000579122 SUOXP51687 545 aa19.42■□□□□ 0.7
CDKN2A-213ENST00000579122 CDR2Q01850 454 aa19.42■□□□□ 0.7
CDKN2A-213ENST00000579122 C1QBPQ07021 282 aaKnown RBP19.42■□□□□ 0.7
CDKN2A-213ENST00000579122 CLN3Q13286 438 aa19.42■□□□□ 0.7
CDKN2A-213ENST00000579122 ELOCQ15369 112 aa19.42■□□□□ 0.7
CDKN2A-213ENST00000579122 INO80DQ53TQ3 878 aaPredicted RBP19.42■□□□□ 0.7
CDKN2A-213ENST00000579122 HSP90AA4PQ58FG1 418 aa19.42■□□□□ 0.7
CDKN2A-213ENST00000579122 LVRNQ6Q4G3 990 aa19.42■□□□□ 0.7
CDKN2A-213ENST00000579122 SDR16C5Q8N3Y7 309 aa19.42■□□□□ 0.7
CDKN2A-213ENST00000579122 CCDC185Q8N715 623 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms