RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 PAFAH1B3Q15102 231 aaKnown RBP3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 SIX1Q15475 284 aaPredicted RBP3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 PLEKHG6Q3KR16 790 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 PITRM1Q5JRX3 1037 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 DGKKQ5KSL6 1271 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 ERMARDQ5T6L9 678 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 ACBD5Q5T8D3 534 aaPredicted RBP3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 EMC10Q5UCC4 262 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 EGFLAMQ63HQ2 1017 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 NCBP2-AS2Q69YL0 99 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 SLC9A4Q6AI14 798 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 AADACL2Q6P093 401 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 TPGS1Q6ZTW0 290 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 RFX8Q6ZV50 586 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 VSIG1Q86XK7 387 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 YAF2Q8IY57 180 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 KATNAL2Q8IYT4 538 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 UMODL1-AS1Q8N2C9 162 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 PLD5Q8N7P1 536 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 NAT16Q8N8M0 369 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 RTL3Q8N8U3 475 aaKnown RBP3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 IL17RCQ8NAC3 791 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 OR7D4Q8NG98 312 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 USP33Q8TEY7 942 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 FRS2Q8WU20 508 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 FAM3CQ92520 227 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 FAM131CQ96AQ9 280 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 TBC1D31Q96DN5 1066 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 TMA16Q96EY4 203 aaKnown RBP3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 HES6Q96HZ4 224 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 OLFM3Q96PB7 478 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 SORCS2Q96PQ0 1159 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 FANCD2OSQ96PS1 177 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 CSPG4P5Q96PW8 444 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 PNKPQ96T60 521 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 ACOX2Q99424 681 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 GABRG3Q99928 467 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 P2RY13Q9BPV8 354 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 ZNF670Q9BS34 389 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 MENTQ9BUN1 341 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 TLR10Q9BXR5 811 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 ZYG11BQ9C0D3 744 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 NACA2Q9H009 215 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 ZDHHC4Q9NPG8 344 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 PRMT8Q9NR22 394 aaPredicted RBP3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 ABCB8Q9NUT2 735 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 KLHL11Q9NVR0 708 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 THG1LQ9NWX6 298 aaKnown RBP3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 RCOR3Q9P2K3 495 aaPredicted RBP3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 OR12D3Q9UGF7 316 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 PCSK1NQ9UHG2 260 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 GGA2Q9UJY4 613 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 PAXBP1Q9Y5B6 917 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 PCDHA3Q9Y5H8 950 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 ACTL7AQ9Y615 435 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 GON4LQ3T8J9 2241 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 WDR87Q6ZQQ6 2873 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 ARHGEF17Q96PE2 2063 aaPredicted RBP3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 GPR179Q6PRD1 2367 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 hCG_1818297A0A087WSY0 165 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 CXorf51AA0A1B0GTR3 108 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 TCRBV7S2A1N4TA0A589 114 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 ILVBLA1L0T0 632 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 MACROD2A1Z1Q3 448 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 TMEM110-MUSTN1A8MSY1 372 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 PRR33A8MZF0 331 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 SGK1O00141 431 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 MAN2B1O00754 1011 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 MUSKO15146 869 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 FGF10O15520 208 aaPredicted RBP3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 SMAD6O43541 496 aaKnown RBP3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 PSTPIP1O43586 416 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 MFSD11O43934 449 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 PRPSAP2O60256 369 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 SNAP91O60641 907 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 MAFKO60675 156 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 CLDN11O75508 207 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 PALMO75781 387 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 RNF8O76064 485 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 FTCDO95954 541 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 MT-CO1P00395 513 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 DCNP07585 359 aaKnown RBP3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 CCDC175P0C221 793 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 PABPC1P11940 636 aaKnown RBP3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 SRCP12931 536 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 PECAM1P16284 738 aaPredicted RBP3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 DRD1P21728 446 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 KDELR1P24390 212 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 GRIA2P42262 883 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 IL12RB1P42701 662 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 TNFRSF4P43489 277 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 RGRP47804 291 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 MAPKAPK2P49137 400 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 STK19P49842 368 aaPredicted RBP3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 CLCN5P51795 746 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 ZNF135P52742 658 aaPredicted RBP3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 HMGA2P52926 109 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 COPAP53621 1224 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms