RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 GDF10P55107 478 aa11.4□□□□□ -0.58
CDK5RAP3-210ENST00000578733 SATB1Q01826 763 aa11.4□□□□□ -0.58
CDK5RAP3-210ENST00000578733 C2orf54Q08AI8 447 aa11.4□□□□□ -0.58
CDK5RAP3-210ENST00000578733 MTAPQ13126 283 aa11.4□□□□□ -0.58
CDK5RAP3-210ENST00000578733 NCEH1Q6PIU2 408 aa11.4□□□□□ -0.58
CDK5RAP3-210ENST00000578733 KIAA1324Q6UXG2 1013 aaKnown RBP11.4□□□□□ -0.58
CDK5RAP3-210ENST00000578733 GDPD4Q6W3E5 623 aa11.4□□□□□ -0.58
CDK5RAP3-210ENST00000578733 ASCL5Q7RTU5 278 aa11.4□□□□□ -0.58
CDK5RAP3-210ENST00000578733 KBTBD6Q86V97 674 aa11.4□□□□□ -0.58
CDK5RAP3-210ENST00000578733 TMPRSS6Q8IU80 811 aa11.4□□□□□ -0.58
CDK5RAP3-210ENST00000578733 MMAAQ8IVH4 418 aaKnown RBP11.4□□□□□ -0.58
CDK5RAP3-210ENST00000578733 PGBD5Q8N414 524 aa11.4□□□□□ -0.58
CDK5RAP3-210ENST00000578733 PIP4K2CQ8TBX8 421 aa11.4□□□□□ -0.58
CDK5RAP3-210ENST00000578733 GRIN3AQ8TCU5 1115 aa11.4□□□□□ -0.58
CDK5RAP3-210ENST00000578733 HCAR2Q8TDS4 363 aa11.4□□□□□ -0.58
CDK5RAP3-210ENST00000578733 SLCO2A1Q92959 643 aa11.4□□□□□ -0.58
CDK5RAP3-210ENST00000578733 SIPA1Q96FS4 1042 aa11.4□□□□□ -0.58
CDK5RAP3-210ENST00000578733 IFT43Q96FT9 208 aa11.4□□□□□ -0.58
CDK5RAP3-210ENST00000578733 IMP4Q96G21 291 aaKnown RBP11.4□□□□□ -0.58
CDK5RAP3-210ENST00000578733 KRT12Q99456 494 aa11.4□□□□□ -0.58
CDK5RAP3-210ENST00000578733 FSD1LQ9BXM9 530 aa11.4□□□□□ -0.58
CDK5RAP3-210ENST00000578733 ADGRE3Q9BY15 652 aa11.4□□□□□ -0.58
CDK5RAP3-210ENST00000578733 C10orf88Q9H8K7 445 aa11.4□□□□□ -0.58
CDK5RAP3-210ENST00000578733 FAM153AQ9UHL3 310 aa11.4□□□□□ -0.58
CDK5RAP3-210ENST00000578733 SPAG17Q6Q759 2223 aa11.4□□□□□ -0.58
CDK5RAP3-210ENST00000578733 LRRK1Q38SD2 2015 aa11.4□□□□□ -0.59
CDK5RAP3-210ENST00000578733 FAM187AA6NFU0 413 aa11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 AP3B1O00203 1094 aa11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 ZNF217O75362 1048 aa11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 LEFTY1O75610 366 aa11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 CHRM1P11229 460 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 PSMD8P48556 350 aa11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 SUOXP51687 545 aa11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 COPAP53621 1224 aa11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 TUBB4BP68371 445 aa11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 SARNPP82979 210 aaKnown RBP11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 DSC2Q02487 901 aa11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 GAS6Q14393 721 aa11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 CST6Q15828 149 aa11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 ZNF805Q5CZA5 627 aa11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 ARSIQ5FYB1 569 aa11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 ARMC12Q5T9G4 340 aa11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 KIAA1211LQ6NV74 962 aa11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 C8orf74Q6P047 294 aa11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 TTC27Q6P3X3 843 aa11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 BRAT1Q6PJG6 821 aa11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 TMEM92Q6UXU6 159 aa11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 PCGF5Q86SE9 256 aa11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 CNTD1Q8N815 330 aa11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 CHST14Q8NCH0 376 aa11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 OR6K2Q8NGY2 324 aa11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 GANCQ8TET4 914 aa11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 PDCD6IPQ8WUM4 868 aaKnown RBP11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 HMGB4Q8WW32 186 aa11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 RBM15Q96T37 977 aaKnown RBP eCLIP11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 FAM129BQ96TA1 746 aa11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 OMDQ99983 421 aa11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 TRPM6Q9BX84 2022 aa11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 RAB17Q9H0T7 212 aa11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 MTG2Q9H4K7 406 aa11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 SUV39H2Q9H5I1 410 aa11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 LRRC40Q9H9A6 602 aa11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 NOD2Q9HC29 1040 aa11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 DLGAP2Q9P1A6 1054 aa11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 ASIC3Q9UHC3 531 aa11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 PPM1HQ9ULR3 514 aa11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 RAI2Q9Y5P3 530 aa11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 WASF2Q9Y6W5 498 aa11.39□□□□□ -0.59
CDK5RAP3-210ENST00000578733 THADAQ6YHU6 1953 aa11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 FAM186AA6NE01 2351 aa11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 MUSKO15146 869 aa11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 PI15O43692 258 aa11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 CPP00450 1065 aa11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 UGT2B4P06133 528 aa11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 ITGB7P26010 798 aa11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 PSMB4P28070 264 aa11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 OXTRP30559 389 aa11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 SLC8A1P32418 973 aa11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 CD68P34810 354 aaPredicted RBP11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 ADCY8P40145 1251 aa11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 RGRP47804 291 aa11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 NEK3P51956 506 aa11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 EPHB1P54762 984 aa11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 NRLP54845 237 aa11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 RPL26P61254 145 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 RPS14P62263 151 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 BASP1P80723 227 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 CDK18Q07002 472 aa11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 GPS1Q13098 491 aa11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 PTK6Q13882 451 aa11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 GLE1Q53GS7 698 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 NAPEPLDQ6IQ20 393 aa11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 ANO7Q6IWH7 933 aa11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 ERAP2Q6P179 960 aa11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 PKN3Q6P5Z2 889 aa11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 FBXL19Q6PCT2 694 aa11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 USP30Q70CQ3 517 aa11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 LINC00523Q86TU6 105 aa11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 JAMLQ86YT9 394 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms