RNA–Protein interactions for RNA: ENST00000577802.1

CDK5RAP3-205, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 415 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-205ENST00000577802 THAP10Q9P2Z0 257 aaPredicted RBP13.42□□□□□ -0.26
CDK5RAP3-205ENST00000577802 HECAQ9UBI9 543 aaPredicted RBP13.42□□□□□ -0.26
CDK5RAP3-205ENST00000577802 SUN2Q9UH99 717 aa13.42□□□□□ -0.26
CDK5RAP3-205ENST00000577802 SORCS3Q9UPU3 1222 aa13.42□□□□□ -0.26
CDK5RAP3-205ENST00000577802 BRWD1Q9NSI6 2320 aa13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 TCRBV7S3A2A0A539 114 aa13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 PRRT4C9JH25 899 aa13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 K7ERQ8 282 aa13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 TRIM24O15164 1050 aa13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 SMAD6O43541 496 aaKnown RBP13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 PRNPP04156 253 aa13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 ASGR2P07307 311 aa13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 ALADP13716 330 aa13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 PGAM1P18669 254 aa13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 ADRA1AP35348 466 aa13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 MAGEA4P43358 317 aa13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 PDE1BQ01064 536 aa13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 TFF2Q03403 129 aa13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 PRKCQQ04759 706 aa13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 ELAVL3Q14576 367 aaKnown RBP13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 ZNF234Q14588 700 aa13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 STARD3Q14849 445 aa13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 SLC1A5Q15758 541 aa13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 PTPRNQ16849 979 aa13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 MYLK3Q32MK0 819 aa13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 HNRNPA1L2Q32P51 320 aaKnown RBP13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 BEND6Q5SZJ8 279 aaPredicted RBP13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 SYCP2LQ5T4T6 812 aa13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 ATXN7L2Q5T6C5 722 aaPredicted RBP13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 Q6ZVU0 165 aa13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 ZNF534Q76KX8 674 aa13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 NLRP9Q7RTR0 991 aa13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 CROCCP2Q86T23 111 aa13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 ZNF513Q8N8E2 541 aaPredicted RBP13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 OR52K1Q8NGK4 314 aa13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 GABPB2Q8TAK5 448 aaPredicted RBP13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 UBLCP1Q8WVY7 318 aaPredicted RBP13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 ATXN2LQ8WWM7 1075 aaKnown RBP13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 CHFRQ96EP1 664 aa13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 STAMBPL1Q96FJ0 436 aa13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 SHDQ96IW2 340 aa13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 HEPHQ9BQS7 1158 aa13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 TNKS2Q9H2K2 1166 aa13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 PABPC3Q9H361 631 aaKnown RBP13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 ZDHHC6Q9H6R6 413 aa13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 HEBP1Q9NRV9 189 aa13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 HACD3Q9P035 362 aa13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 IL36AQ9UHA7 158 aa13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 MRPS17Q9Y2R5 130 aaKnown RBP13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 RAI2Q9Y5P3 530 aa13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 ACTL7AQ9Y615 435 aa13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 MYOFQ9NZM1 2061 aa13.41□□□□□ -0.26
CDK5RAP3-205ENST00000577802 LOC285095A0A1B0GVY8 99 aa13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 HEATR9A2RTY3 570 aa13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 C1QTNF3-AMACRE9PGA6 284 aa13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 BNIP3LO60238 219 aa13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 POLBP06746 335 aa13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 IVLP07476 585 aa13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 ABHD2P08910 425 aa13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 FAM153BP0C7A2 387 aa13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 PAMP19021 973 aa13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 STX2P32856 288 aa13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 RGRP47804 291 aa13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 SOX9P48436 509 aa13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 SESN2P58004 480 aaPredicted RBP13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 POLR2LP62875 67 aaKnown RBP13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 LRRC32Q14392 662 aa13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 MLF2Q15773 248 aaPredicted RBP13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 FAM153CQ494X1 144 aa13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 TMEM196Q5HYL7 178 aa13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 DGKKQ5KSL6 1271 aa13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 BRAT1Q6PJG6 821 aa13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 RANBP10Q6VN20 620 aa13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 CAND1Q86VP6 1230 aaKnown RBP13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 PALM2Q8IXS6 379 aa13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 UBALD2Q8IYN6 164 aa13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 FBXO36Q8NEA4 188 aa13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 HCAR2Q8TDS4 363 aa13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 FRS2Q8WU20 508 aa13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 SORCS1Q8WY21 1168 aa13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 FAM3CQ92520 227 aa13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 SPOCK2Q92563 424 aa13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 RMDN1Q96DB5 314 aa13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 RANBP9Q96S59 729 aa13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 CCDC77Q9BR77 488 aa13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 TMEM245Q9H330 911 aa13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 CDC42EP4Q9H3Q1 356 aaKnown RBP13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 VIPAS39Q9H9C1 493 aa13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 PPCSQ9HAB8 311 aa13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 MRM3Q9HC36 420 aaKnown RBP13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 ZC3H7BQ9UGR2 993 aaKnown RBP13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 EVLQ9UI08 416 aaPredicted RBP13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 SLCO3A1Q9UIG8 710 aa13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 MAD1L1Q9Y6D9 718 aa13.4□□□□□ -0.26
CDK5RAP3-205ENST00000577802 SZT2Q5T011 3432 aa13.39□□□□□ -0.27
CDK5RAP3-205ENST00000577802 A0A087WUV0 522 aaPredicted RBP13.39□□□□□ -0.27
CDK5RAP3-205ENST00000577802 TTC34A8MYJ7 566 aa13.39□□□□□ -0.27
CDK5RAP3-205ENST00000577802 HTRA2O43464 458 aaPredicted RBP13.39□□□□□ -0.27
CDK5RAP3-205ENST00000577802 ATP8B1O43520 1251 aa13.39□□□□□ -0.27
CDK5RAP3-205ENST00000577802 SYNCRIPO60506 623 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms