RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 USP33Q8TEY7 942 aa13.96□□□□□ -0.17
RNF43-202ENST00000577625 GAB3Q8WWW8 586 aa13.96□□□□□ -0.17
RNF43-202ENST00000577625 MYEOVQ96EZ4 313 aa13.96□□□□□ -0.17
RNF43-202ENST00000577625 DNAJC1Q96KC8 554 aaKnown RBP13.96□□□□□ -0.17
RNF43-202ENST00000577625 IL12RB2Q99665 862 aa13.96□□□□□ -0.17
RNF43-202ENST00000577625 LBHD1Q9BQE6 289 aaPredicted RBP13.96□□□□□ -0.17
RNF43-202ENST00000577625 ZBP1Q9H171 429 aa13.96□□□□□ -0.17
RNF43-202ENST00000577625 SMYD2Q9NRG4 433 aa13.96□□□□□ -0.17
RNF43-202ENST00000577625 MRPL17Q9NRX2 175 aaKnown RBP13.96□□□□□ -0.17
RNF43-202ENST00000577625 INIPQ9NRY2 104 aa13.96□□□□□ -0.17
RNF43-202ENST00000577625 MOCS1Q9NZB8 636 aa13.96□□□□□ -0.17
RNF43-202ENST00000577625 DRGXA6NNA5 263 aa13.96□□□□□ -0.18
RNF43-202ENST00000577625 CXorf49A8MYA2 514 aaPredicted RBP13.96□□□□□ -0.18
RNF43-202ENST00000577625 PRRG1O14668 218 aa13.96□□□□□ -0.18
RNF43-202ENST00000577625 MATN3O15232 486 aa13.96□□□□□ -0.18
RNF43-202ENST00000577625 TEX28O15482 410 aa13.96□□□□□ -0.18
RNF43-202ENST00000577625 COCHO43405 550 aa13.96□□□□□ -0.18
RNF43-202ENST00000577625 HSPA1AP0DMV8 641 aaKnown RBP13.96□□□□□ -0.18
RNF43-202ENST00000577625 HSPA1BP0DMV9 641 aaKnown RBP13.96□□□□□ -0.18
RNF43-202ENST00000577625 TROVE2P10155 538 aaKnown RBP eCLIP13.96□□□□□ -0.18
RNF43-202ENST00000577625 HOXD12P35452 270 aa13.96□□□□□ -0.18
RNF43-202ENST00000577625 EMP3P54852 163 aa13.96□□□□□ -0.18
RNF43-202ENST00000577625 AP2B1P63010 937 aa13.96□□□□□ -0.18
RNF43-202ENST00000577625 PLD1Q13393 1074 aa13.96□□□□□ -0.18
RNF43-202ENST00000577625 MED21Q13503 144 aa13.96□□□□□ -0.18
RNF43-202ENST00000577625 HECTD3Q5T447 861 aa13.96□□□□□ -0.18
RNF43-202ENST00000577625 CASC4Q6P4E1 433 aa13.96□□□□□ -0.18
RNF43-202ENST00000577625 TRMT10BQ6PF06 316 aaKnown RBP13.96□□□□□ -0.18
RNF43-202ENST00000577625 RINLQ6ZS11 566 aa13.96□□□□□ -0.18
RNF43-202ENST00000577625 CHSY1Q86X52 802 aa13.96□□□□□ -0.18
RNF43-202ENST00000577625 GPR65Q8IYL9 337 aa13.96□□□□□ -0.18
RNF43-202ENST00000577625 SPOCK2Q92563 424 aa13.96□□□□□ -0.18
RNF43-202ENST00000577625 BADQ92934 168 aa13.96□□□□□ -0.18
RNF43-202ENST00000577625 TTC17Q96AE7 1141 aa13.96□□□□□ -0.18
RNF43-202ENST00000577625 CASS4Q9NQ75 786 aa13.96□□□□□ -0.18
RNF43-202ENST00000577625 ARL8BQ9NVJ2 186 aa13.96□□□□□ -0.18
RNF43-202ENST00000577625 FAIMQ9NVQ4 179 aa13.96□□□□□ -0.18
RNF43-202ENST00000577625 CXXC1Q9P0U4 656 aaPredicted RBP13.96□□□□□ -0.18
RNF43-202ENST00000577625 PCDHB12Q9Y5F1 795 aa13.96□□□□□ -0.18
RNF43-202ENST00000577625 INSL5Q9Y5Q6 135 aa13.96□□□□□ -0.18
RNF43-202ENST00000577625 DOCK6Q96HP0 2047 aa13.96□□□□□ -0.18
RNF43-202ENST00000577625 MTCL1Q9Y4B5 1905 aaKnown RBP13.95□□□□□ -0.18
RNF43-202ENST00000577625 MYO7AQ13402 2215 aa13.95□□□□□ -0.18
RNF43-202ENST00000577625 TMEM247A6NEH6 219 aa13.95□□□□□ -0.18
RNF43-202ENST00000577625 FGBP02675 491 aa13.95□□□□□ -0.18
RNF43-202ENST00000577625 CA4P22748 312 aa13.95□□□□□ -0.18
RNF43-202ENST00000577625 GALK1P51570 392 aa13.95□□□□□ -0.18
RNF43-202ENST00000577625 NDST2P52849 883 aa13.95□□□□□ -0.18
RNF43-202ENST00000577625 MTTPP55157 894 aa13.95□□□□□ -0.18
RNF43-202ENST00000577625 CRADDP78560 199 aa13.95□□□□□ -0.18
RNF43-202ENST00000577625 TWF1Q12792 350 aa13.95□□□□□ -0.18
RNF43-202ENST00000577625 PPIGQ13427 754 aaKnown RBP eCLIP13.95□□□□□ -0.183e-7■■□□□ 11.5
RNF43-202ENST00000577625 PRPSAP1Q14558 356 aa13.95□□□□□ -0.18
RNF43-202ENST00000577625 VEPH1Q14D04 833 aa13.95□□□□□ -0.18
RNF43-202ENST00000577625 TTC39BQ5VTQ0 682 aaPredicted RBP13.95□□□□□ -0.18
RNF43-202ENST00000577625 SLC15A3Q8IY34 581 aa13.95□□□□□ -0.18
RNF43-202ENST00000577625 OR52K1Q8NGK4 314 aa13.95□□□□□ -0.18
RNF43-202ENST00000577625 EBF3Q9H4W6 596 aa13.95□□□□□ -0.18
RNF43-202ENST00000577625 LRRC40Q9H9A6 602 aa13.95□□□□□ -0.18
RNF43-202ENST00000577625 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.95□□□□□ -0.18
RNF43-202ENST00000577625 SYBUQ9NX95 663 aa13.95□□□□□ -0.18
RNF43-202ENST00000577625 TRPM5Q9NZQ8 1165 aa13.95□□□□□ -0.18
RNF43-202ENST00000577625 VILLO15195 856 aa13.95□□□□□ -0.18
RNF43-202ENST00000577625 PSMD3O43242 534 aa13.95□□□□□ -0.18
RNF43-202ENST00000577625 USP12O75317 370 aa13.95□□□□□ -0.18
RNF43-202ENST00000577625 FAM155BO75949 473 aa13.95□□□□□ -0.18
RNF43-202ENST00000577625 OR6B1O95007 311 aa13.95□□□□□ -0.18
RNF43-202ENST00000577625 MT-ND3P03897 115 aa13.95□□□□□ -0.18
RNF43-202ENST00000577625 EN2P19622 333 aaPredicted RBP13.95□□□□□ -0.18
RNF43-202ENST00000577625 TACR2P21452 398 aa13.95□□□□□ -0.18
RNF43-202ENST00000577625 RPA3P35244 121 aaPredicted RBP13.95□□□□□ -0.18
RNF43-202ENST00000577625 RPL26P61254 145 aaKnown RBP13.95□□□□□ -0.18
RNF43-202ENST00000577625 FPGSQ05932 587 aa13.95□□□□□ -0.18
RNF43-202ENST00000577625 ASPHQ12797 758 aa13.95□□□□□ -0.18
RNF43-202ENST00000577625 LGSNQ5TDP6 509 aa13.95□□□□□ -0.18
RNF43-202ENST00000577625 OTOP3Q7RTS5 596 aa13.95□□□□□ -0.18
RNF43-202ENST00000577625 OTOAQ7RTW8 1153 aa13.95□□□□□ -0.18
RNF43-202ENST00000577625 NET1Q7Z628 596 aaPredicted RBP13.95□□□□□ -0.18
RNF43-202ENST00000577625 CIR1Q86X95 450 aaPredicted RBP13.95□□□□□ -0.18
RNF43-202ENST00000577625 FIBCD1Q8N539 461 aa13.95□□□□□ -0.18
RNF43-202ENST00000577625 FNDC8Q8TC99 324 aa13.95□□□□□ -0.18
RNF43-202ENST00000577625 CLP1Q92989 425 aaKnown RBP13.95□□□□□ -0.18
RNF43-202ENST00000577625 HMCESQ96FZ2 354 aa13.95□□□□□ -0.18
RNF43-202ENST00000577625 OXNAD1Q96HP4 312 aaPredicted RBP13.95□□□□□ -0.18
RNF43-202ENST00000577625 ABHD8Q96I13 439 aa13.95□□□□□ -0.18
RNF43-202ENST00000577625 RPRD1AQ96P16 312 aaPredicted RBP13.95□□□□□ -0.18
RNF43-202ENST00000577625 NACA2Q9H009 215 aa13.95□□□□□ -0.18
RNF43-202ENST00000577625 BFARQ9NZS9 450 aa13.95□□□□□ -0.18
RNF43-202ENST00000577625 IPO11Q9UI26 975 aaKnown RBP13.95□□□□□ -0.18
RNF43-202ENST00000577625 AP1G1O43747 822 aa13.94□□□□□ -0.18
RNF43-202ENST00000577625 MAGEC1O60732 1142 aa13.94□□□□□ -0.18
RNF43-202ENST00000577625 KRT37O76014 449 aa13.94□□□□□ -0.18
RNF43-202ENST00000577625 SNRPAP09012 282 aaKnown RBP13.94□□□□□ -0.18
RNF43-202ENST00000577625 CTSAP10619 480 aa13.94□□□□□ -0.18
RNF43-202ENST00000577625 SLC6A4P31645 630 aa13.94□□□□□ -0.18
RNF43-202ENST00000577625 KRT72Q14CN4 511 aa13.94□□□□□ -0.18
RNF43-202ENST00000577625 TAF12Q16514 161 aa13.94□□□□□ -0.18
RNF43-202ENST00000577625 HSP90AA5PQ58FG0 334 aa13.94□□□□□ -0.18
RNF43-202ENST00000577625 C6orf163Q5TEZ5 329 aa13.94□□□□□ -0.18
RNF43-202ENST00000577625 TMEM150AQ86TG1 271 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms