RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 EGR4Q05215 589 aa5.49□□□□□ -1.53
NUP88-213ENST00000576862 LTBQ06643 244 aa5.49□□□□□ -1.53
NUP88-213ENST00000576862 GALNT2Q10471 571 aa5.49□□□□□ -1.53
NUP88-213ENST00000576862 TRAF3Q13114 568 aa5.49□□□□□ -1.53
NUP88-213ENST00000576862 PWP2Q15269 919 aaKnown RBP5.49□□□□□ -1.53
NUP88-213ENST00000576862 SLC9C2Q5TAH2 1124 aa5.49□□□□□ -1.53
NUP88-213ENST00000576862 C8orf82Q6P1X6 216 aaPredicted RBP5.49□□□□□ -1.53
NUP88-213ENST00000576862 ELP5Q8TE02 316 aa5.49□□□□□ -1.53
NUP88-213ENST00000576862 PPM1EQ8WY54 764 aa5.49□□□□□ -1.53
NUP88-213ENST00000576862 WASH6PQ9NQA3 447 aa5.49□□□□□ -1.53
NUP88-213ENST00000576862 IL1RAPL1Q9NZN1 696 aa5.49□□□□□ -1.53
NUP88-213ENST00000576862 HCN3Q9P1Z3 774 aa5.49□□□□□ -1.53
NUP88-213ENST00000576862 NCAPD3P42695 1498 aa5.49□□□□□ -1.53
NUP88-213ENST00000576862 BAZ1BQ9UIG0 1483 aaKnown RBP5.49□□□□□ -1.53
NUP88-213ENST00000576862 SMARCA2P51531 1590 aa5.49□□□□□ -1.53
NUP88-213ENST00000576862 EIF4G1Q04637 1599 aaKnown RBP5.49□□□□□ -1.53
NUP88-213ENST00000576862 ARID4BQ4LE39 1312 aaPredicted RBP5.48□□□□□ -1.53
NUP88-213ENST00000576862 HSPB2A8KAH6 182 aa5.48□□□□□ -1.53
NUP88-213ENST00000576862 LACTBL1A8MY62 500 aa5.48□□□□□ -1.53
NUP88-213ENST00000576862 KLRF2D3W0D1 207 aa5.48□□□□□ -1.53
NUP88-213ENST00000576862 SLC28A2O43868 658 aa5.48□□□□□ -1.53
NUP88-213ENST00000576862 GLUD1P00367 558 aa5.48□□□□□ -1.53
NUP88-213ENST00000576862 PTPN2P17706 415 aa5.48□□□□□ -1.53
NUP88-213ENST00000576862 GLUD2P49448 558 aa5.48□□□□□ -1.53
NUP88-213ENST00000576862 CLDN2P57739 230 aa5.48□□□□□ -1.53
NUP88-213ENST00000576862 YWHAZP63104 245 aaKnown RBP5.48□□□□□ -1.53
NUP88-213ENST00000576862 ZXDBP98169 803 aa5.48□□□□□ -1.53
NUP88-213ENST00000576862 HSPB2Q16082 182 aa5.48□□□□□ -1.53
NUP88-213ENST00000576862 PRICKLE4Q2TBC4 344 aa5.48□□□□□ -1.53
NUP88-213ENST00000576862 TDRD12Q587J7 1177 aaKnown RBP5.48□□□□□ -1.53
NUP88-213ENST00000576862 SERTAD4-AS1Q5TG53 156 aa5.48□□□□□ -1.53
NUP88-213ENST00000576862 CERS3Q8IU89 383 aa5.48□□□□□ -1.53
NUP88-213ENST00000576862 LURAP1LQ8IV03 231 aa5.48□□□□□ -1.53
NUP88-213ENST00000576862 CLIP4Q8N3C7 705 aa5.48□□□□□ -1.53
NUP88-213ENST00000576862 ESX1Q8N693 406 aa5.48□□□□□ -1.53
NUP88-213ENST00000576862 APOPT1Q96IL0 206 aa5.48□□□□□ -1.53
NUP88-213ENST00000576862 THOC3Q96J01 351 aaKnown RBP5.48□□□□□ -1.53
NUP88-213ENST00000576862 HEMGNQ9BXL5 484 aa5.48□□□□□ -1.53
NUP88-213ENST00000576862 TMEM51Q9NW97 253 aa5.48□□□□□ -1.53
NUP88-213ENST00000576862 BABAM1Q9NWV8 329 aa5.48□□□□□ -1.53
NUP88-213ENST00000576862 KIAA1456Q9P272 454 aa5.48□□□□□ -1.53
NUP88-213ENST00000576862 HSPB7Q9UBY9 170 aa5.48□□□□□ -1.53
NUP88-213ENST00000576862 A0A0U1RQF3 1178 aa5.47□□□□□ -1.53
NUP88-213ENST00000576862 J3KR12 359 aa5.47□□□□□ -1.53
NUP88-213ENST00000576862 TIMM23O14925 209 aa5.47□□□□□ -1.53
NUP88-213ENST00000576862 T-ENOLP0DO92 83 aa5.47□□□□□ -1.53
NUP88-213ENST00000576862 SLC2A4P14672 509 aa5.47□□□□□ -1.53
NUP88-213ENST00000576862 ZNF8P17098 575 aaPredicted RBP5.47□□□□□ -1.53
NUP88-213ENST00000576862 MYF6P23409 242 aa5.47□□□□□ -1.53
NUP88-213ENST00000576862 ITGB8P26012 769 aa5.47□□□□□ -1.53
NUP88-213ENST00000576862 KCNJ4P48050 445 aa5.47□□□□□ -1.53
NUP88-213ENST00000576862 DSC1Q08554 894 aa5.47□□□□□ -1.53
NUP88-213ENST00000576862 CAMK1Q14012 370 aa5.47□□□□□ -1.53
NUP88-213ENST00000576862 BAK1Q16611 211 aa5.47□□□□□ -1.53
NUP88-213ENST00000576862 SOWAHAQ2M3V2 549 aa5.47□□□□□ -1.53
NUP88-213ENST00000576862 PRAMEF19Q5SWL8 479 aa5.47□□□□□ -1.53
NUP88-213ENST00000576862 NAA35Q5VZE5 725 aa5.47□□□□□ -1.53
NUP88-213ENST00000576862 TMEM81Q6P7N7 255 aa5.47□□□□□ -1.53
NUP88-213ENST00000576862 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.47□□□□□ -1.53
NUP88-213ENST00000576862 TADA2BQ86TJ2 420 aa5.47□□□□□ -1.53
NUP88-213ENST00000576862 TBC1D26Q86UD7 250 aa5.47□□□□□ -1.53
NUP88-213ENST00000576862 HEATR4Q86WZ0 1026 aa5.47□□□□□ -1.53
NUP88-213ENST00000576862 SPATA2LQ8IUW3 424 aaPredicted RBP5.47□□□□□ -1.53
NUP88-213ENST00000576862 MB21D2Q8IYB1 491 aaPredicted RBP5.47□□□□□ -1.53
NUP88-213ENST00000576862 ZCCHC10Q8TBK6 192 aa5.47□□□□□ -1.53
NUP88-213ENST00000576862 SNAPC3Q92966 411 aa5.47□□□□□ -1.53
NUP88-213ENST00000576862 WNT16Q9UBV4 365 aa5.47□□□□□ -1.53
NUP88-213ENST00000576862 CRYL1Q9Y2S2 319 aa5.47□□□□□ -1.53
NUP88-213ENST00000576862 SLC45A1Q9Y2W3 748 aa5.47□□□□□ -1.53
NUP88-213ENST00000576862 A0A1B0GVM2 712 aa5.46□□□□□ -1.54
NUP88-213ENST00000576862 TYW5A2RUC4 315 aaKnown RBP5.46□□□□□ -1.54
NUP88-213ENST00000576862 TNPO2O14787 897 aaKnown RBP5.46□□□□□ -1.54
NUP88-213ENST00000576862 KLK8O60259 260 aa5.46□□□□□ -1.54
NUP88-213ENST00000576862 ATP2C2O75185 946 aa5.46□□□□□ -1.54
NUP88-213ENST00000576862 GALTP07902 379 aa5.46□□□□□ -1.54
NUP88-213ENST00000576862 MXI1P50539 228 aa5.46□□□□□ -1.54
NUP88-213ENST00000576862 NR1H2P55055 460 aa5.46□□□□□ -1.54
NUP88-213ENST00000576862 RPP30P78346 268 aaKnown RBP5.46□□□□□ -1.54
NUP88-213ENST00000576862 BNC1Q01954 994 aa5.46□□□□□ -1.54
NUP88-213ENST00000576862 ST3GAL1Q11201 340 aa5.46□□□□□ -1.54
NUP88-213ENST00000576862 GPR68Q15743 365 aa5.46□□□□□ -1.54
NUP88-213ENST00000576862 ZNF585BQ52M93 769 aa5.46□□□□□ -1.54
NUP88-213ENST00000576862 ESCO2Q56NI9 601 aa5.46□□□□□ -1.54
NUP88-213ENST00000576862 DCAF6Q58WW2 860 aa5.46□□□□□ -1.54
NUP88-213ENST00000576862 CES5AQ6NT32 575 aa5.46□□□□□ -1.54
NUP88-213ENST00000576862 PDXDC1Q6P996 788 aa5.46□□□□□ -1.54
NUP88-213ENST00000576862 SFTPA2Q8IWL1 248 aa5.46□□□□□ -1.54
NUP88-213ENST00000576862 KIAA2013Q8IYS2 634 aa5.46□□□□□ -1.54
NUP88-213ENST00000576862 OR14A16Q8NHC5 309 aa5.46□□□□□ -1.54
NUP88-213ENST00000576862 ARRDC2Q8TBH0 407 aa5.46□□□□□ -1.54
NUP88-213ENST00000576862 MPHOSPH8Q99549 860 aa5.46□□□□□ -1.54
NUP88-213ENST00000576862 C9orf78Q9NZ63 289 aaPredicted RBP5.46□□□□□ -1.54
NUP88-213ENST00000576862 CTNNAL1Q9UBT7 734 aa5.46□□□□□ -1.54
NUP88-213ENST00000576862 PGAP2Q9UHJ9 254 aa5.46□□□□□ -1.54
NUP88-213ENST00000576862 ZNF580Q9UK33 172 aa5.46□□□□□ -1.54
NUP88-213ENST00000576862 SLC13A4Q9UKG4 626 aa5.46□□□□□ -1.54
NUP88-213ENST00000576862 AGO1Q9UL18 857 aaKnown RBP5.46□□□□□ -1.54
NUP88-213ENST00000576862 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.46□□□□□ -1.54
NUP88-213ENST00000576862 A3GALT2U3KPV4 340 aa5.46□□□□□ -1.54
NUP88-213ENST00000576862 EVPLQ92817 2033 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms