RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 MESDQ14696 234 aa8.78□□□□□ -1
SMG6-216ENST00000575176 HLA-BQ31612 363 aa8.78□□□□□ -1
SMG6-216ENST00000575176 SYCP2LQ5T4T6 812 aa8.78□□□□□ -1
SMG6-216ENST00000575176 TMCO4Q5TGY1 634 aa8.78□□□□□ -1
SMG6-216ENST00000575176 LRRC38Q5VT99 294 aa8.78□□□□□ -1
SMG6-216ENST00000575176 NEK5Q6P3R8 708 aa8.78□□□□□ -1
SMG6-216ENST00000575176 TMCO3Q6UWJ1 677 aa8.78□□□□□ -1
SMG6-216ENST00000575176 NYAP1Q6ZVC0 841 aa8.78□□□□□ -1
SMG6-216ENST00000575176 HORMAD1Q86X24 394 aa8.78□□□□□ -1
SMG6-216ENST00000575176 CCDC170Q8IYT3 715 aa8.78□□□□□ -1
SMG6-216ENST00000575176 RGL4Q8IZJ4 473 aa8.78□□□□□ -1
SMG6-216ENST00000575176 LZTR1Q8N653 840 aa8.78□□□□□ -1
SMG6-216ENST00000575176 SNX19Q92543 992 aa8.78□□□□□ -1
SMG6-216ENST00000575176 KRT35Q92764 455 aa8.78□□□□□ -1
SMG6-216ENST00000575176 BMFQ96LC9 184 aa8.78□□□□□ -1
SMG6-216ENST00000575176 KLHL32Q96NJ5 620 aa8.78□□□□□ -1
SMG6-216ENST00000575176 ZNF599Q96NL3 588 aa8.78□□□□□ -1
SMG6-216ENST00000575176 CAMK1GQ96NX5 476 aa8.78□□□□□ -1
SMG6-216ENST00000575176 RNF157Q96PX1 679 aa8.78□□□□□ -1
SMG6-216ENST00000575176 C1QTNF2Q9BXJ5 285 aa8.78□□□□□ -1
SMG6-216ENST00000575176 TMEM121BQ9BXQ6 578 aaPredicted RBP8.78□□□□□ -1
SMG6-216ENST00000575176 NUSAP1Q9BXS6 441 aaKnown RBP8.78□□□□□ -1
SMG6-216ENST00000575176 OSBPL1AQ9BXW6 950 aa8.78□□□□□ -1
SMG6-216ENST00000575176 MIR1-1HGQ9H1L0 117 aa8.78□□□□□ -1
SMG6-216ENST00000575176 DEF6Q9H4E7 631 aa8.78□□□□□ -1
SMG6-216ENST00000575176 TRIM10Q9UDY6 481 aa8.78□□□□□ -1
SMG6-216ENST00000575176 NCKAP1Q9Y2A7 1128 aa8.78□□□□□ -1
SMG6-216ENST00000575176 ANKRD6Q9Y2G4 727 aa8.78□□□□□ -1
SMG6-216ENST00000575176 PCDHA13Q9Y5I0 950 aa8.78□□□□□ -1
SMG6-216ENST00000575176 ANKRD11Q6UB99 2663 aaPredicted RBP8.77□□□□□ -1
SMG6-216ENST00000575176 A0A1B0GTQ1 180 aa8.77□□□□□ -1.01
SMG6-216ENST00000575176 POM121BA6NF01 834 aa8.77□□□□□ -1.01
SMG6-216ENST00000575176 DFFAO00273 331 aa8.77□□□□□ -1.01
SMG6-216ENST00000575176 KRIT1O00522 736 aa8.77□□□□□ -1.01
SMG6-216ENST00000575176 POP4O95707 220 aaKnown RBP8.77□□□□□ -1.01
SMG6-216ENST00000575176 MMP2P08253 660 aa8.77□□□□□ -1.01
SMG6-216ENST00000575176 ADRB1P08588 477 aa8.77□□□□□ -1.01
SMG6-216ENST00000575176 LHCGRP22888 699 aa8.77□□□□□ -1.01
SMG6-216ENST00000575176 PMLP29590 882 aa8.77□□□□□ -1.01
SMG6-216ENST00000575176 IGFALSP35858 605 aa8.77□□□□□ -1.01
SMG6-216ENST00000575176 GJC1P36383 396 aa8.77□□□□□ -1.01
SMG6-216ENST00000575176 ARL4AP40617 200 aa8.77□□□□□ -1.01
SMG6-216ENST00000575176 NSUN2Q08J23 767 aaKnown RBP eCLIP8.77□□□□□ -1.01
SMG6-216ENST00000575176 TRAF2Q12933 501 aa8.77□□□□□ -1.01
SMG6-216ENST00000575176 ZBTB17Q13105 803 aa8.77□□□□□ -1.01
SMG6-216ENST00000575176 RFTN1Q14699 578 aaPredicted RBP8.77□□□□□ -1.01
SMG6-216ENST00000575176 LBRQ14739 615 aaKnown RBP8.77□□□□□ -1.01
SMG6-216ENST00000575176 AGERQ15109 404 aa8.77□□□□□ -1.01
SMG6-216ENST00000575176 PDK2Q15119 407 aa8.77□□□□□ -1.01
SMG6-216ENST00000575176 PPM1JQ5JR12 505 aa8.77□□□□□ -1.01
SMG6-216ENST00000575176 KCTD16Q68DU8 428 aa8.77□□□□□ -1.01
SMG6-216ENST00000575176 MFSD7Q6UXD7 560 aa8.77□□□□□ -1.01
SMG6-216ENST00000575176 GDPD4Q6W3E5 623 aa8.77□□□□□ -1.01
SMG6-216ENST00000575176 DGLUCYQ7Z3D6 616 aa8.77□□□□□ -1.01
SMG6-216ENST00000575176 CAMK1DQ8IU85 385 aa8.77□□□□□ -1.01
SMG6-216ENST00000575176 PELI3Q8N2H9 469 aa8.77□□□□□ -1.01
SMG6-216ENST00000575176 CNTD1Q8N815 330 aa8.77□□□□□ -1.01
SMG6-216ENST00000575176 TP53I13Q8NBR0 393 aaPredicted RBP8.77□□□□□ -1.01
SMG6-216ENST00000575176 TPCN2Q8NHX9 752 aa8.77□□□□□ -1.01
SMG6-216ENST00000575176 ARRDC2Q8TBH0 407 aa8.77□□□□□ -1.01
SMG6-216ENST00000575176 TADA1Q96BN2 335 aa8.77□□□□□ -1.01
SMG6-216ENST00000575176 HDAC11Q96DB2 347 aa8.77□□□□□ -1.01
SMG6-216ENST00000575176 CCDC114Q96M63 670 aa8.77□□□□□ -1.01
SMG6-216ENST00000575176 TSGA13Q96PP4 275 aa8.77□□□□□ -1.01
SMG6-216ENST00000575176 SMIM14Q96QK8 99 aa8.77□□□□□ -1.01
SMG6-216ENST00000575176 ZDHHC5Q9C0B5 715 aa8.77□□□□□ -1.01
SMG6-216ENST00000575176 ZNHIT6Q9NWK9 470 aaKnown RBP8.77□□□□□ -1.01
SMG6-216ENST00000575176 LCMT1Q9UIC8 334 aa8.77□□□□□ -1.01
SMG6-216ENST00000575176 TPX2Q9ULW0 747 aaKnown RBP8.77□□□□□ -1.01
SMG6-216ENST00000575176 DMTF1Q9Y222 760 aa8.77□□□□□ -1.01
SMG6-216ENST00000575176 EPN1Q9Y6I3 576 aaPredicted RBP8.77□□□□□ -1.01
SMG6-216ENST00000575176 PKD1L2Q7Z442 2459 aa8.77□□□□□ -1.01
SMG6-216ENST00000575176 LOC400499M0QZD8 3231 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 ASXL3Q9C0F0 2248 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 GRID2IPA4D2P6 1211 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 TMEM110-MUSTN1A8MSY1 372 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 KCNK3O14649 394 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 PSTPIP1O43586 416 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 PCDHGA12O60330 932 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 PRLP01236 227 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 PRKCGP05129 697 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 HLA-DQB2P05538 268 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 KRT7P08729 469 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 TPM1P09493 284 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 GNSP15586 552 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 PECAM1P16284 738 aaPredicted RBP8.76□□□□□ -1.01
SMG6-216ENST00000575176 DESP17661 470 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 SDHBP21912 280 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 CD38P28907 300 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 EPHA8P29322 1005 aaPredicted RBP8.76□□□□□ -1.01
SMG6-216ENST00000575176 SERPINB6P35237 376 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 MAGEA1P43355 309 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 NOP2P46087 812 aaKnown RBP8.76□□□□□ -1.01
SMG6-216ENST00000575176 DNA2P51530 1060 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 VAV2P52735 878 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 PFN3P60673 137 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 MAXP61244 160 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 PPIDQ08752 370 aaKnown RBP8.76□□□□□ -1.01
SMG6-216ENST00000575176 NIPAL4Q0D2K0 466 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 PTPRRQ15256 657 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms