RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 TNFRSF12AQ9NP84 129 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 ZNF302Q9NR11 478 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 AGPAT4Q9NRZ5 378 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 TMEM9Q9P0T7 183 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 IFT80Q9P2H3 777 aaPredicted RBP14.55□□□□□ -0.08
SMG6-215ENST00000574501 MID2Q9UJV3 735 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 TRPC5OSA6NMA1 111 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 SNAP29O95721 258 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 APOA4P06727 396 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 NFICP08651 508 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 VDRP11473 427 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 HPCAL1P37235 193 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 GSSP48637 474 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 C1QTNF8P60827 252 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 GRSF1Q12849 480 aaKnown RBP eCLIP14.54□□□□□ -0.08
SMG6-215ENST00000574501 SF3B4Q15427 424 aaKnown RBP eCLIP14.54□□□□□ -0.08
SMG6-215ENST00000574501 DPYSL2Q16555 572 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 HSDL1Q3SXM5 330 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 CERCAMQ5T4B2 595 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 ZPBP2Q6X784 338 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 TP53INP2Q8IXH6 220 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 ZNF567Q8N184 647 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 DHRSXQ8N5I4 330 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 NAT16Q8N8M0 369 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 CPB2Q96IY4 423 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 FEM1CQ96JP0 617 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 CHRAC1Q9NRG0 131 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 SEPT3Q9UH03 358 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 SUN2Q9UH99 717 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 VANGL2Q9ULK5 521 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 SCAF8Q9UPN6 1271 aaKnown RBP14.54□□□□□ -0.08
SMG6-215ENST00000574501 NEMP2A6NFY4 417 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 KCNK1O00180 336 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 TIMM44O43615 452 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 NRP2O60462 931 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 TPH1P17752 444 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 FASP25445 335 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 PCYT1AP49585 367 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 NDST1P52848 882 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 RAD23AP54725 363 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 TMBIM6P55061 237 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 IFRD2Q12894 506 aaPredicted RBP14.54□□□□□ -0.08
SMG6-215ENST00000574501 ATP6AP1Q15904 470 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 TMEM132AQ24JP5 1023 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 CYBRD1Q53TN4 286 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 TSTD2Q5T7W7 516 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 PID1Q7Z2X4 250 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 SLC41A1Q8IVJ1 513 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 ABHD11Q8NFV4 315 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 CLEC4CQ8WTT0 213 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 STYXQ8WUJ0 223 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 C9orf16Q9BUW7 83 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 MROQ9BYG7 248 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 TRIM8Q9BZR9 551 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 PCDH12Q9NPG4 1184 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 EIF2B3Q9NR50 452 aaKnown RBP14.54□□□□□ -0.08
SMG6-215ENST00000574501 PKD2L2Q9NZM6 624 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 PSME2Q9UL46 239 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 TRAF6Q9Y4K3 522 aa14.54□□□□□ -0.08
SMG6-215ENST00000574501 TOR1BO14657 336 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 PFDN6O15212 129 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 ACOX3O15254 700 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 GPC4O75487 556 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 MT-ND1P03886 318 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 IL10P22301 178 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 S100A1P23297 94 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 EEF1DP29692 281 aaKnown RBP14.53□□□□□ -0.08
SMG6-215ENST00000574501 CAPGP40121 348 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 YBX1P67809 324 aaKnown RBP14.53□□□□□ -0.08
SMG6-215ENST00000574501 ANO4Q32M45 955 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 NEPROQ6NW34 567 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 DSG4Q86SJ6 1040 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 FAM35AQ86V20 835 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 DDIASQ8IXT1 998 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 CENPLQ8N0S6 344 aaPredicted RBP14.53□□□□□ -0.08
SMG6-215ENST00000574501 RDH11Q8TC12 318 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 USP33Q8TEY7 942 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 SGCDQ92629 289 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 NXNL1Q96CM4 212 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 SH3YL1Q96HL8 342 aaPredicted RBP14.53□□□□□ -0.08
SMG6-215ENST00000574501 NSMCE3Q96MG7 304 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 FTHL17Q9BXU8 183 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 SEZ6LQ9BYH1 1024 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 LHPPQ9H008 270 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 OSBPL2Q9H1P3 480 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 RAD21L1Q9H4I0 556 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 EHD1Q9H4M9 534 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 NOX1Q9Y5S8 564 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 ATP6AP2A0A1C7CYW4 349 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 DPYSL4O14531 572 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 SYNCRIPO60506 623 aaKnown RBP14.53□□□□□ -0.08
SMG6-215ENST00000574501 ATP6AP2O75787 350 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 PRKCBP05771 671 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 SLC35E2BP0CK96 405 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 TCEA1P23193 301 aaKnown RBP14.53□□□□□ -0.08
SMG6-215ENST00000574501 HLCSP50747 726 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 CCT8P50990 548 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 MPP1Q00013 466 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 SLC6A3Q01959 620 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 SQLEQ14534 574 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms