RNA–Protein interactions for RNA: ENST00000574217.1

PRPF8-210, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 310 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-210ENST00000574217 SIN3BO75182 1162 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 GJB3O75712 270 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 POP4O95707 220 aaKnown RBP6.77□□□□□ -1.33
PRPF8-210ENST00000574217 AP2A1O95782 977 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 MT-CYBP00156 380 aaPredicted RBP6.77□□□□□ -1.33
PRPF8-210ENST00000574217 APRTP07741 180 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 RHOXF2BP0C7M4 288 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 CA4P22748 312 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 SERPINA4P29622 427 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 PXNP49023 591 aaPredicted RBP6.77□□□□□ -1.33
PRPF8-210ENST00000574217 LMAN1P49257 510 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 FNTBP49356 437 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 CCNHP51946 323 aaPredicted RBP6.77□□□□□ -1.33
PRPF8-210ENST00000574217 TERF1P54274 439 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 GEMP55040 296 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 GUCY2DQ02846 1103 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 BCL2L1Q07817 233 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 NIPAL4Q0D2K0 466 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 CALCOCO2Q13137 446 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 MPP3Q13368 585 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 SEMA5AQ13591 1074 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 ELAVL3Q14576 367 aaKnown RBP6.77□□□□□ -1.33
PRPF8-210ENST00000574217 SLC14A2Q15849 920 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 PCSK7Q16549 785 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 MYLK3Q32MK0 819 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 C9orf64Q5T6V5 341 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 IZUMO3Q5VZ72 239 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 DUPD1Q68J44 220 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 NCEH1Q6PIU2 408 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 DPY19L3Q6ZPD9 716 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 PCGF5Q86SE9 256 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 DSG4Q86SJ6 1040 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 SRLQ86TD4 932 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 PRPF39Q86UA1 669 aaKnown RBP6.77□□□□□ -1.33
PRPF8-210ENST00000574217 PPIL6Q8IXY8 311 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 PAF1Q8N7H5 531 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 PDCD7Q8N8D1 485 aaKnown RBP6.77□□□□□ -1.33
PRPF8-210ENST00000574217 BBOF1Q8ND07 529 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 TSTD1Q8NFU3 115 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 IPMKQ8NFU5 416 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 OR6K2Q8NGY2 324 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 SPATA22Q8NHS9 363 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 GRIN3AQ8TCU5 1115 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 OR8D1Q8WZ84 308 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 OXNAD1Q96HP4 312 aaPredicted RBP6.77□□□□□ -1.33
PRPF8-210ENST00000574217 LRIG1Q96JA1 1093 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 TUBGCP5Q96RT8 1024 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 RBM15Q96T37 977 aaKnown RBP eCLIP6.77□□□□□ -1.33
PRPF8-210ENST00000574217 PRRX2Q99811 253 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 GORASP1Q9BQQ3 440 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 HEPHQ9BQS7 1158 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 RHOXF2Q9BQY4 288 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 FSD1LQ9BXM9 530 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 DPH5Q9H2P9 285 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 MTG2Q9H4K7 406 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 ZDHHC6Q9H6R6 413 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 ATP13A3Q9H7F0 1226 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 ETNK1Q9HBU6 452 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 EPB41L5Q9HCM4 733 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 CD248Q9HCU0 757 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 POLMQ9NP87 494 aaPredicted RBP6.77□□□□□ -1.33
PRPF8-210ENST00000574217 EIF2B3Q9NR50 452 aaKnown RBP6.77□□□□□ -1.33
PRPF8-210ENST00000574217 UBP1Q9NZI7 540 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 IL36AQ9UHA7 158 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 FAM153AQ9UHL3 310 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 DMGDHQ9UI17 866 aaKnown RBP6.77□□□□□ -1.33
PRPF8-210ENST00000574217 TPX2Q9ULW0 747 aaKnown RBP6.77□□□□□ -1.33
PRPF8-210ENST00000574217 SNX24Q9Y343 169 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 HCN4Q9Y3Q4 1203 aa6.77□□□□□ -1.33
PRPF8-210ENST00000574217 ESYT3A0FGR9 886 aa6.76□□□□□ -1.33
PRPF8-210ENST00000574217 SMAPO00193 183 aa6.76□□□□□ -1.33
PRPF8-210ENST00000574217 ALOX15BO15296 676 aa6.76□□□□□ -1.33
PRPF8-210ENST00000574217 PSMD3O43242 534 aa6.76□□□□□ -1.33
PRPF8-210ENST00000574217 RNASEH1O60930 286 aaKnown RBP6.76□□□□□ -1.33
PRPF8-210ENST00000574217 SOCS5O75159 536 aa6.76□□□□□ -1.33
PRPF8-210ENST00000574217 PMPCBO75439 489 aa6.76□□□□□ -1.33
PRPF8-210ENST00000574217 SEC31AO94979 1220 aaKnown RBP6.76□□□□□ -1.33
PRPF8-210ENST00000574217 PIGNO95427 931 aa6.76□□□□□ -1.33
PRPF8-210ENST00000574217 APBB3O95704 486 aa6.76□□□□□ -1.33
PRPF8-210ENST00000574217 PRNPP04156 253 aa6.76□□□□□ -1.33
PRPF8-210ENST00000574217 MMP2P08253 660 aa6.76□□□□□ -1.33
PRPF8-210ENST00000574217 GABRG2P18507 467 aa6.76□□□□□ -1.33
PRPF8-210ENST00000574217 ITIH2P19823 946 aa6.76□□□□□ -1.33
PRPF8-210ENST00000574217 TPSB2P20231 275 aa6.76□□□□□ -1.33
PRPF8-210ENST00000574217 IVDP26440 423 aa6.76□□□□□ -1.33
PRPF8-210ENST00000574217 GKP32189 559 aa6.76□□□□□ -1.33
PRPF8-210ENST00000574217 MAGEA6P43360 314 aa6.76□□□□□ -1.33
PRPF8-210ENST00000574217 RPL21P46778 160 aaKnown RBP6.76□□□□□ -1.33
PRPF8-210ENST00000574217 DGKEP52429 567 aa6.76□□□□□ -1.33
PRPF8-210ENST00000574217 PTPN5P54829 565 aa6.76□□□□□ -1.33
PRPF8-210ENST00000574217 DRG2P55039 364 aaKnown RBP6.76□□□□□ -1.33
PRPF8-210ENST00000574217 WNT3AP56704 352 aa6.76□□□□□ -1.33
PRPF8-210ENST00000574217 SARNPP82979 210 aaKnown RBP6.76□□□□□ -1.33
PRPF8-210ENST00000574217 SKOR1P84550 965 aa6.76□□□□□ -1.33
PRPF8-210ENST00000574217 CDK16Q00536 496 aa6.76□□□□□ -1.33
PRPF8-210ENST00000574217 CAMK2GQ13555 558 aaPredicted RBP6.76□□□□□ -1.33
PRPF8-210ENST00000574217 KCNJ11Q14654 390 aa6.76□□□□□ -1.33
PRPF8-210ENST00000574217 MORF4L2Q15014 288 aa6.76□□□□□ -1.33
PRPF8-210ENST00000574217 TPSAB1Q15661 275 aa6.76□□□□□ -1.33
PRPF8-210ENST00000574217 ZNF528Q3MIS6 628 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms