RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 DENND6BQ8NEG7 585 aa9.77□□□□□ -0.85
NPLOC4-212ENST00000573328 OR4C6Q8NH72 309 aa9.77□□□□□ -0.85
NPLOC4-212ENST00000573328 NXPE2Q96DL1 559 aa9.77□□□□□ -0.85
NPLOC4-212ENST00000573328 PEBP4Q96S96 227 aa9.77□□□□□ -0.85
NPLOC4-212ENST00000573328 EIF3CQ99613 913 aaKnown RBP9.77□□□□□ -0.85
NPLOC4-212ENST00000573328 CINPQ9BW66 212 aaPredicted RBP9.77□□□□□ -0.85
NPLOC4-212ENST00000573328 TRIM7Q9C029 511 aa9.77□□□□□ -0.85
NPLOC4-212ENST00000573328 CBX8Q9HC52 389 aa9.77□□□□□ -0.85
NPLOC4-212ENST00000573328 EVA1BQ9NVM1 165 aa9.77□□□□□ -0.85
NPLOC4-212ENST00000573328 LHX3Q9UBR4 397 aa9.77□□□□□ -0.85
NPLOC4-212ENST00000573328 LHX6Q9UPM6 363 aa9.77□□□□□ -0.85
NPLOC4-212ENST00000573328 ITPR1Q14643 2758 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 APC2O95996 2303 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 SPTY2D1-AS1A0A0U1RR47 76 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 TMEM191CA6NGB0 347 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 J3KR12 359 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 TAF4O00268 1085 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 DDX3XO00571 662 aaKnown RBP eCLIP9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 TRIM38O00635 465 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 INSIG1O15503 277 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 PRAMEF11O60813 436 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 MMP20O60882 483 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 PALMO75781 387 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 NEBLO76041 1014 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 MYBL1P10243 752 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 ERCC2P18074 760 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 ACP1P24666 158 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 MIPP30301 263 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 ARL4AP40617 200 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 PAPOLAP51003 745 aaKnown RBP9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 UBASH3AP57075 661 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 FANCCQ00597 558 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 ZNF211Q13398 564 aaPredicted RBP9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 ILKQ13418 452 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 PTK2BQ14289 1009 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 FZD2Q14332 565 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 GRM3Q14832 879 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 SMTNL2Q2TAL5 461 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 KLHL40Q2TBA0 621 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 PROX2Q3B8N5 592 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 ERAP2Q6P179 960 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 C19orf48Q6RUI8 117 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 SLC25A45Q8N413 288 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 ZNF548Q8NEK5 533 aaPredicted RBP9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 LMX1AQ8TE12 382 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 FNIP1Q8TF40 1166 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 CPLX3Q8WVH0 158 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 TSC1Q92574 1164 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 HSPH1Q92598 858 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 IFT43Q96FT9 208 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 BMFQ96LC9 184 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 LENG8Q96PV6 779 aaPredicted RBP9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 FUCA2Q9BTY2 467 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 DUSP23Q9BVJ7 150 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 C1QTNF2Q9BXJ5 285 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 EDEM3Q9BZQ6 932 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 SLC39A8Q9C0K1 460 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 LRRC19Q9H756 370 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 ZWILCHQ9H900 591 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 NLGN3Q9NZ94 848 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 RAXQ9Y2V3 346 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 COQ6Q9Y2Z9 468 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 MFHAS1Q9Y4C4 1052 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 AK5Q9Y6K8 562 aa9.76□□□□□ -0.85
NPLOC4-212ENST00000573328 LAMA5O15230 3695 aa9.75□□□□□ -0.85
NPLOC4-212ENST00000573328 H3BRJ5 948 aa9.75□□□□□ -0.85
NPLOC4-212ENST00000573328 AREL1O15033 823 aa9.75□□□□□ -0.85
NPLOC4-212ENST00000573328 SPINT1O43278 529 aa9.75□□□□□ -0.85
NPLOC4-212ENST00000573328 AQP9O43315 295 aa9.75□□□□□ -0.85
NPLOC4-212ENST00000573328 LRCH4O75427 683 aa9.75□□□□□ -0.85
NPLOC4-212ENST00000573328 CSF2P04141 144 aa9.75□□□□□ -0.85
NPLOC4-212ENST00000573328 NME1P15531 152 aaKnown RBP9.75□□□□□ -0.85
NPLOC4-212ENST00000573328 JUNDP17535 347 aa9.75□□□□□ -0.85
NPLOC4-212ENST00000573328 ITIH2P19823 946 aa9.75□□□□□ -0.85
NPLOC4-212ENST00000573328 SERPINA4P29622 427 aa9.75□□□□□ -0.85
NPLOC4-212ENST00000573328 IGFALSP35858 605 aa9.75□□□□□ -0.85
NPLOC4-212ENST00000573328 SSR1P43307 286 aaKnown RBP9.75□□□□□ -0.85
NPLOC4-212ENST00000573328 DUSP3P51452 185 aaPredicted RBP9.75□□□□□ -0.85
NPLOC4-212ENST00000573328 ZNF135P52742 658 aaPredicted RBP9.75□□□□□ -0.85
NPLOC4-212ENST00000573328 TARDBPQ13148 414 aaKnown RBP eCLIP9.75□□□□□ -0.85
NPLOC4-212ENST00000573328 CAMK2BQ13554 666 aa9.75□□□□□ -0.85
NPLOC4-212ENST00000573328 ZNF235Q14590 738 aa9.75□□□□□ -0.85
NPLOC4-212ENST00000573328 NR1I3Q14994 352 aa9.75□□□□□ -0.85
NPLOC4-212ENST00000573328 CYTH1Q15438 398 aa9.75□□□□□ -0.85
NPLOC4-212ENST00000573328 NFKBIBQ15653 356 aa9.75□□□□□ -0.85
NPLOC4-212ENST00000573328 FIGNQ5HY92 759 aa9.75□□□□□ -0.85
NPLOC4-212ENST00000573328 KDM7AQ6ZMT4 941 aa9.75□□□□□ -0.85
NPLOC4-212ENST00000573328 APOLD1Q96LR9 279 aa9.75□□□□□ -0.85
NPLOC4-212ENST00000573328 DCBLD2Q96PD2 775 aa9.75□□□□□ -0.85
NPLOC4-212ENST00000573328 KLF6Q99612 283 aaPredicted RBP9.75□□□□□ -0.85
NPLOC4-212ENST00000573328 CPEB1Q9BZB8 566 aaKnown RBP9.75□□□□□ -0.85
NPLOC4-212ENST00000573328 SUV39H2Q9H5I1 410 aa9.75□□□□□ -0.85
NPLOC4-212ENST00000573328 ATP13A3Q9H7F0 1226 aa9.75□□□□□ -0.85
NPLOC4-212ENST00000573328 CAAP1Q9H8G2 361 aa9.75□□□□□ -0.85
NPLOC4-212ENST00000573328 PDFQ9HBH1 243 aa9.75□□□□□ -0.85
NPLOC4-212ENST00000573328 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.75□□□□□ -0.85
NPLOC4-212ENST00000573328 DKK3Q9UBP4 350 aa9.75□□□□□ -0.85
NPLOC4-212ENST00000573328 APOBEC3BQ9UH17 382 aaKnown RBP9.75□□□□□ -0.85
NPLOC4-212ENST00000573328 CLCA2Q9UQC9 943 aa9.75□□□□□ -0.85
NPLOC4-212ENST00000573328 BZW2Q9Y6E2 419 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms