RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 OR14C36Q8NHC7 312 aa10.21□□□□□ -0.78
SMG6-213ENST00000573166 CAVIN3Q969G5 261 aa10.21□□□□□ -0.78
SMG6-213ENST00000573166 SPHK2Q9NRA0 654 aa10.21□□□□□ -0.78
SMG6-213ENST00000573166 DCTN4Q9UJW0 460 aa10.21□□□□□ -0.78
SMG6-213ENST00000573166 GOLGA8QA0A0J9YX86 632 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 GOLGA8OA6NCC3 632 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 GOLGA8NF8WBI6 632 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 FAM72CH0Y354 149 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 J3KR12 359 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 KDM1AO60341 852 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 SERPIND1P05546 499 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 OR56A5P0C7T3 313 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 FMO4P31512 558 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 FAM72AQ5TYM5 149 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 AGBL2Q5U5Z8 902 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 FAM72DQ6L9T8 149 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 ARMC6Q6NXE6 501 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 ARCQ7LC44 396 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 FAM72BQ86X60 149 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 UBR7Q8N806 425 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 CERS2Q96G23 380 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 ZFYVE1Q9HBF4 777 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 CSNK1G1Q9HCP0 422 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 RUVBL2Q9Y230 463 aaKnown RBP10.2□□□□□ -0.78
SMG6-213ENST00000573166 DIAPH2O60879 1101 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 HMOX2P30519 316 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 ARL4DP49703 201 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 TCEA2Q15560 299 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 FAM182AQ5T1J6 154 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 DCAF12L1Q5VU92 463 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 UNC5AQ6ZN44 842 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 DDIASQ8IXT1 998 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 CXorf38Q8TB03 319 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 SGSM3Q96HU1 749 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 KLHL32Q96NJ5 620 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 UNKQ9C0B0 810 aaKnown RBP10.2□□□□□ -0.78
SMG6-213ENST00000573166 SYBUQ9NX95 663 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 PSD3Q9NYI0 1048 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 WWOXQ9NZC7 414 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 BAIAP2L1Q9UHR4 511 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 ARIH1Q9Y4X5 557 aaPredicted RBP10.2□□□□□ -0.78
SMG6-213ENST00000573166 TRIP12Q14669 1992 aaPredicted RBP10.2□□□□□ -0.78
SMG6-213ENST00000573166 PLXNB2O15031 1838 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 IFRD1O00458 451 aaPredicted RBP10.2□□□□□ -0.78
SMG6-213ENST00000573166 GCATO75600 419 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 PIAS1O75925 651 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 AP2A1O95782 977 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 PSMC3P17980 439 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 CNTFP26441 200 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 PBX2P40425 430 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 CASP2P42575 452 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 NRLP54845 237 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 PPIDQ08752 370 aaKnown RBP10.2□□□□□ -0.78
SMG6-213ENST00000573166 RAB6CQ53S08 254 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 AHI1Q8N157 1196 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 SLC35B2Q8TB61 432 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 FEM1CQ96JP0 617 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 C1orf74Q96LT6 269 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 FAM111AQ96PZ2 611 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 RAB6CQ9H0N0 254 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 STN1Q9H668 368 aaKnown RBP10.2□□□□□ -0.78
SMG6-213ENST00000573166 RAD18Q9NS91 495 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 GGT7Q9UJ14 662 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 CD207Q9UJ71 328 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 RNF112Q9ULX5 631 aa10.2□□□□□ -0.78
SMG6-213ENST00000573166 NCF1BA6NI72 391 aaPredicted RBP10.19□□□□□ -0.78
SMG6-213ENST00000573166 NCF1CA8MVU1 366 aaPredicted RBP10.19□□□□□ -0.78
SMG6-213ENST00000573166 CLASP2O75122 1294 aaKnown RBP10.19□□□□□ -0.78
SMG6-213ENST00000573166 CIB2O75838 187 aa10.19□□□□□ -0.78
SMG6-213ENST00000573166 NCF1P14598 390 aaPredicted RBP10.19□□□□□ -0.78
SMG6-213ENST00000573166 ATF6P18850 670 aa10.19□□□□□ -0.78
SMG6-213ENST00000573166 RASSF2P50749 326 aa10.19□□□□□ -0.78
SMG6-213ENST00000573166 GDF10P55107 478 aa10.19□□□□□ -0.78
SMG6-213ENST00000573166 STX3Q13277 289 aa10.19□□□□□ -0.78
SMG6-213ENST00000573166 LVRNQ6Q4G3 990 aa10.19□□□□□ -0.78
SMG6-213ENST00000573166 STK40Q8N2I9 435 aa10.19□□□□□ -0.78
SMG6-213ENST00000573166 C12orf50Q8NA57 414 aaPredicted RBP10.19□□□□□ -0.78
SMG6-213ENST00000573166 OR4K2Q8NGD2 314 aa10.19□□□□□ -0.78
SMG6-213ENST00000573166 CPT1BQ92523 772 aa10.19□□□□□ -0.78
SMG6-213ENST00000573166 ART4Q93070 314 aa10.19□□□□□ -0.78
SMG6-213ENST00000573166 TCEAL4Q96EI5 215 aa10.19□□□□□ -0.78
SMG6-213ENST00000573166 GREB1LQ9C091 1923 aaPredicted RBP10.19□□□□□ -0.78
SMG6-213ENST00000573166 TRPM7Q96QT4 1865 aa10.19□□□□□ -0.78
SMG6-213ENST00000573166 MYH15Q9Y2K3 1946 aa10.19□□□□□ -0.78
SMG6-213ENST00000573166 A0A1W2PQ67 120 aa10.19□□□□□ -0.78
SMG6-213ENST00000573166 APOA4P06727 396 aa10.19□□□□□ -0.78
SMG6-213ENST00000573166 RPSAP08865 295 aaKnown RBP10.19□□□□□ -0.78
SMG6-213ENST00000573166 RFTN1Q14699 578 aaPredicted RBP10.19□□□□□ -0.78
SMG6-213ENST00000573166 KIF19Q2TAC6 998 aa10.19□□□□□ -0.78
SMG6-213ENST00000573166 DRICH1Q6PGQ1 229 aaPredicted RBP10.19□□□□□ -0.78
SMG6-213ENST00000573166 FAM151BQ6UXP7 276 aa10.19□□□□□ -0.78
SMG6-213ENST00000573166 Q6ZVU0 165 aa10.19□□□□□ -0.78
SMG6-213ENST00000573166 SNX31Q8N9S9 440 aa10.19□□□□□ -0.78
SMG6-213ENST00000573166 PANX3Q96QZ0 392 aa10.19□□□□□ -0.78
SMG6-213ENST00000573166 WDR6Q9NNW5 1121 aaKnown RBP10.19□□□□□ -0.78
SMG6-213ENST00000573166 POLMQ9NP87 494 aaPredicted RBP10.19□□□□□ -0.78
SMG6-213ENST00000573166 GLRA3O75311 464 aa10.19□□□□□ -0.78
SMG6-213ENST00000573166 ESRRBO95718 433 aa10.19□□□□□ -0.78
SMG6-213ENST00000573166 CHN1P15882 459 aa10.19□□□□□ -0.78
SMG6-213ENST00000573166 ELP6Q0PNE2 266 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms