RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 MATN3O15232 486 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 RAD51BO15315 384 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 KRT86O43790 486 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 JCHAINP01591 159 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 WNT1P04628 370 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 MMP2P08253 660 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 PDHA1P08559 390 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 CCNB1P14635 433 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 GM2AP17900 193 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 CCNCP24863 283 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 PTPN3P26045 913 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 CD68P34810 354 aaPredicted RBP7.06□□□□□ -1.28
SMG6-209ENST00000571442 PTPN7P35236 360 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 MMP13P45452 471 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 CSNK1DP48730 415 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 NEK3P51956 506 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 RWDD2BP57060 319 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 OTUD4Q01804 1114 aaKnown RBP7.06□□□□□ -1.28
SMG6-209ENST00000571442 WASHC5Q12768 1159 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 RALGDSQ12967 914 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 KLF1Q13351 362 aaPredicted RBP7.06□□□□□ -1.28
SMG6-209ENST00000571442 HNRNPDQ14103 355 aaKnown RBP7.06□□□□□ -1.28
SMG6-209ENST00000571442 ZNF235Q14590 738 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 RFTN1Q14699 578 aaPredicted RBP7.06□□□□□ -1.28
SMG6-209ENST00000571442 NOMO1Q15155 1222 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 MEI1Q5TIA1 1274 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 MARC1Q5VT66 337 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 FAM46CQ5VWP2 391 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 DSG4Q86SJ6 1040 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 C11orf74Q86VG3 221 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 ZC3H18Q86VM9 953 aaKnown RBP7.06□□□□□ -1.28
SMG6-209ENST00000571442 C17orf53Q8N3J3 647 aaPredicted RBP7.06□□□□□ -1.28
SMG6-209ENST00000571442 ZCCHC9Q8N567 271 aaKnown RBP7.06□□□□□ -1.28
SMG6-209ENST00000571442 RNF10Q8N5U6 811 aaKnown RBP7.06□□□□□ -1.28
SMG6-209ENST00000571442 CCNYQ8ND76 341 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 CADM4Q8NFZ8 388 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 OR2T34Q8NGX1 318 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.06□□□□□ -1.28
SMG6-209ENST00000571442 SNX19Q92543 992 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 FATE1Q969F0 183 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 FUBP1Q96AE4 644 aaKnown RBP7.06□□□□□ -1.28
SMG6-209ENST00000571442 ECHDC3Q96DC8 303 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 RBM41Q96IZ5 413 aaKnown RBP7.06□□□□□ -1.28
SMG6-209ENST00000571442 CCDC114Q96M63 670 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 SLC6A18Q96N87 628 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 ZNF599Q96NL3 588 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 NUDCD1Q96RS6 583 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 IL12RB2Q99665 862 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 MYOCQ99972 504 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 SEMA3CQ99985 751 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 GORASP1Q9BQQ3 440 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 TLR10Q9BXR5 811 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 MAK16Q9BXY0 300 aaKnown RBP7.06□□□□□ -1.28
SMG6-209ENST00000571442 CPEB1Q9BZB8 566 aaKnown RBP7.06□□□□□ -1.28
SMG6-209ENST00000571442 TSGA10Q9BZW7 698 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 BRD8Q9H0E9 1235 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 SUV39H2Q9H5I1 410 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 CAPN10Q9HC96 672 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 FZD3Q9NPG1 666 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 RBM22Q9NW64 420 aaKnown RBP eCLIP7.06□□□□□ -1.28
SMG6-209ENST00000571442 TRMT1Q9NXH9 659 aaKnown RBP7.06□□□□□ -1.28
SMG6-209ENST00000571442 RAB23Q9ULC3 237 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 SCML1Q9UN30 329 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 NCKAP1Q9Y2A7 1128 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 ATP8A1Q9Y2Q0 1164 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 FARP1Q9Y4F1 1045 aaPredicted RBP7.06□□□□□ -1.28
SMG6-209ENST00000571442 PCDHGC4Q9Y5F7 938 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 KNL1Q8NG31 2342 aa7.06□□□□□ -1.28
SMG6-209ENST00000571442 LAMA1P25391 3075 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 CACNA1EQ15878 2313 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 TBC1D3DA0A087WVF3 549 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 TBC1D3IA0A087WXS9 549 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 TBC1D3EA0A087X179 549 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 TBC1D3KA0A087X1G2 549 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 A0A1W2PPC4 97 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 A0A1W2PQU0 124 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 A0A1W2PR77 199 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 MED19A0JLT2 244 aaPredicted RBP7.05□□□□□ -1.28
SMG6-209ENST00000571442 LNP1A1A4G5 178 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 TBC1D3FA6NER0 549 aaPredicted RBP7.05□□□□□ -1.28
SMG6-209ENST00000571442 TBC1D3LB9A6J9 549 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 F5H423 210 aaPredicted RBP7.05□□□□□ -1.28
SMG6-209ENST00000571442 H0Y8X5 98 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 FANCGO15287 622 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 SLC7A4O43246 635 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 HTRA2O43464 458 aaPredicted RBP7.05□□□□□ -1.28
SMG6-209ENST00000571442 LATO43561 262 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 FZD6O60353 706 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 RNGTTO60942 597 aaKnown RBP7.05□□□□□ -1.28
SMG6-209ENST00000571442 PRLP01236 227 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 PTMAP06454 111 aaKnown RBP7.05□□□□□ -1.28
SMG6-209ENST00000571442 TBC1D3HP0C7X1 549 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 ZNF806P0C7X5 589 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 PRLRP16471 622 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 MX2P20592 715 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 TGM2P21980 687 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 RBL1P28749 1068 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 COPS2P61201 443 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 IFI35P80217 286 aaPredicted RBP7.05□□□□□ -1.28
SMG6-209ENST00000571442 SKOR1P84550 965 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms