RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 SCAND2PQ9GZW5 306 aaPredicted RBP7.3□□□□□ -1.24
SMG6-205ENST00000570659 TMEM168Q9H0V1 697 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 ZDHHC6Q9H6R6 413 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 CASS4Q9NQ75 786 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 NCKIPSDQ9NZQ3 722 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 SEPT10Q9P0V9 454 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 APPL1Q9UKG1 709 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 PILRAQ9UKJ1 303 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 KCNMB2Q9Y691 235 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 TYW5A2RUC4 315 aaKnown RBP7.29□□□□□ -1.24
SMG6-205ENST00000570659 STMND1H3BQB6 276 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 MAPK13O15264 365 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 INSIG1O15503 277 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 AP1G1O43747 822 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 LDLRP01130 860 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 ZNF28P17035 718 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 BMP6P22004 513 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 ELAVL4P26378 380 aaKnown RBP7.29□□□□□ -1.24
SMG6-205ENST00000570659 GTF2H1P32780 548 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 NNMTP40261 264 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 RPIAP49247 311 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 OXCT1P55809 520 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 APBA1Q02410 837 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 PPARDQ03181 441 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 KLRB1Q12918 225 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 CUL4AQ13619 759 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 KLHL40Q2TBA0 621 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 FHL5Q5TD97 284 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 ANKRD40Q6AI12 368 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 TRNP1Q6NT89 227 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 C16orf46Q6P387 395 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 MAMDC2Q7Z304 686 aaPredicted RBP7.29□□□□□ -1.24
SMG6-205ENST00000570659 DEFB106AQ8N104 65 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 IL22RA1Q8N6P7 574 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 ZNF557Q8N988 423 aaPredicted RBP7.29□□□□□ -1.24
SMG6-205ENST00000570659 Q8NA96 180 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 WDR48Q8TAF3 677 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 LMO3Q8TAP4 145 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 C19orf60Q96EN9 201 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 FEM1CQ96JP0 617 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 SLC45A3Q96JT2 553 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 NSMCE3Q96MG7 304 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 KREMEN1Q96MU8 473 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 RBM15Q96T37 977 aaKnown RBP eCLIP7.29□□□□□ -1.24
SMG6-205ENST00000570659 DDX50Q9BQ39 737 aaKnown RBP7.29□□□□□ -1.24
SMG6-205ENST00000570659 SLC4A5Q9BY07 1137 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 UNKQ9C0B0 810 aaKnown RBP7.29□□□□□ -1.24
SMG6-205ENST00000570659 KLC2Q9H0B6 622 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 SIK2Q9H0K1 926 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 MUC3BQ9H195 1237 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 PIGVQ9NUD9 493 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 LRIT1Q9P2V4 623 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 HESX1Q9UBX0 185 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 TLK1Q9UKI8 766 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 PCDHA7Q9UN72 937 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 COQ4Q9Y3A0 265 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 PLEKHM1Q9Y4G2 1056 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 PCDHGA3Q9Y5H0 932 aa7.29□□□□□ -1.24
SMG6-205ENST00000570659 DCHS2Q6V1P9 2916 aa7.28□□□□□ -1.24
SMG6-205ENST00000570659 MED13LQ71F56 2210 aa7.28□□□□□ -1.24
SMG6-205ENST00000570659 ZNF891A8MT65 544 aaPredicted RBP7.28□□□□□ -1.24
SMG6-205ENST00000570659 PPM1DO15297 605 aa7.28□□□□□ -1.24
SMG6-205ENST00000570659 KRT86O43790 486 aa7.28□□□□□ -1.24
SMG6-205ENST00000570659 SORBS2O94875 1100 aaKnown RBP7.28□□□□□ -1.24
SMG6-205ENST00000570659 APOEP02649 317 aa7.28□□□□□ -1.24
SMG6-205ENST00000570659 PRNPP04156 253 aa7.28□□□□□ -1.24
SMG6-205ENST00000570659 UGT2B4P06133 528 aa7.28□□□□□ -1.24
SMG6-205ENST00000570659 TIMP2P16035 220 aa7.28□□□□□ -1.24
SMG6-205ENST00000570659 SERPINH1P50454 418 aaKnown RBP7.28□□□□□ -1.24
SMG6-205ENST00000570659 DNA2P51530 1060 aa7.28□□□□□ -1.24
SMG6-205ENST00000570659 THOP1P52888 689 aa7.28□□□□□ -1.24
SMG6-205ENST00000570659 SRP54P61011 504 aaKnown RBP7.28□□□□□ -1.24
SMG6-205ENST00000570659 CHAF1BQ13112 559 aa7.28□□□□□ -1.24
SMG6-205ENST00000570659 INPP5AQ14642 412 aa7.28□□□□□ -1.24
SMG6-205ENST00000570659 STK38Q15208 465 aa7.28□□□□□ -1.24
SMG6-205ENST00000570659 CNGA2Q16280 664 aa7.28□□□□□ -1.24
SMG6-205ENST00000570659 MAP9Q49MG5 647 aa7.28□□□□□ -1.24
SMG6-205ENST00000570659 C14orf28Q4W4Y0 310 aa7.28□□□□□ -1.24
SMG6-205ENST00000570659 RESP18Q5W5W9 173 aa7.28□□□□□ -1.24
SMG6-205ENST00000570659 CPZQ66K79 652 aa7.28□□□□□ -1.24
SMG6-205ENST00000570659 SPECC1LQ69YQ0 1117 aa7.28□□□□□ -1.24
SMG6-205ENST00000570659 ENPP7Q6UWV6 458 aa7.28□□□□□ -1.24
SMG6-205ENST00000570659 INTS8Q75QN2 995 aaKnown RBP7.28□□□□□ -1.24
SMG6-205ENST00000570659 RRAGAQ7L523 313 aa7.28□□□□□ -1.24
SMG6-205ENST00000570659 ZNF438Q7Z4V0 828 aa7.28□□□□□ -1.24
SMG6-205ENST00000570659 C17orf82Q86X59 251 aaPredicted RBP7.28□□□□□ -1.24
SMG6-205ENST00000570659 FAM114A1Q8IWE2 563 aa7.28□□□□□ -1.24
SMG6-205ENST00000570659 IQUBQ8NA54 791 aa7.28□□□□□ -1.24
SMG6-205ENST00000570659 DCAF4L2Q8NA75 395 aa7.28□□□□□ -1.24
SMG6-205ENST00000570659 FAM46DQ8NEK8 389 aa7.28□□□□□ -1.24
SMG6-205ENST00000570659 GOLGA5Q8TBA6 731 aa7.28□□□□□ -1.24
SMG6-205ENST00000570659 CPT1CQ8TCG5 803 aa7.28□□□□□ -1.24
SMG6-205ENST00000570659 BTN2A2Q8WVV5 523 aa7.28□□□□□ -1.24
SMG6-205ENST00000570659 STARD8Q92502 1023 aa7.28□□□□□ -1.24
SMG6-205ENST00000570659 RTP4Q96DX8 246 aa7.28□□□□□ -1.24
SMG6-205ENST00000570659 TBATAQ96M53 351 aa7.28□□□□□ -1.24
SMG6-205ENST00000570659 KLHL32Q96NJ5 620 aa7.28□□□□□ -1.24
SMG6-205ENST00000570659 SLC2A13Q96QE2 648 aa7.28□□□□□ -1.24
SMG6-205ENST00000570659 TAAR9Q96RI9 348 aa7.28□□□□□ -1.24
SMG6-205ENST00000570659 RANBP9Q96S59 729 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms