RNA–Protein interactions for RNA: ENST00000570300.1

NPLOC4-203, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-203ENST00000570300 SSU72Q9NP77 194 aaKnown RBP11.11□□□□□ -0.63
NPLOC4-203ENST00000570300 TREX1Q9NSU2 369 aa11.11□□□□□ -0.63
NPLOC4-203ENST00000570300 PLK2Q9NYY3 685 aa11.11□□□□□ -0.63
NPLOC4-203ENST00000570300 GGA2Q9UJY4 613 aa11.11□□□□□ -0.63
NPLOC4-203ENST00000570300 TCAF1Q9Y4C2 921 aa11.11□□□□□ -0.63
NPLOC4-203ENST00000570300 RPS6KL1Q9Y6S9 549 aa11.11□□□□□ -0.63
NPLOC4-203ENST00000570300 HEPACAM2A8MVW5 462 aa11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 HTRA2O43464 458 aaPredicted RBP11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 FZD6O60353 706 aa11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 SOCS5O75159 536 aa11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 SIN3BO75182 1162 aa11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 TBX10O75333 385 aa11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 ECI2O75521 394 aa11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 ZNF821O75541 412 aaPredicted RBP11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 GSRP00390 522 aa11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 MT-CO1P00395 513 aa11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 PRLP01236 227 aa11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 ASLP04424 464 aa11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 ADH5P11766 374 aa11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 LAMP2P13473 410 aa11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 NR1D1P20393 614 aa11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 LTBRP36941 435 aa11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 VIPR2P41587 438 aa11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 RGRP47804 291 aa11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 SERPINB9P50453 376 aa11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 MAGOHP61326 146 aaKnown RBP11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 RHOAP61586 193 aa11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 ACVR1Q04771 509 aa11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 FUT11Q495W5 492 aa11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 HABP4Q5JVS0 413 aaKnown RBP11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 SIRPB2Q5JXA9 342 aa11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 LGSNQ5TDP6 509 aa11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 KCTD16Q68DU8 428 aa11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 PDPK2PQ6A1A2 396 aa11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 KIAA0930Q6ICG6 404 aaPredicted RBP11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 LEKR1Q6ZMV7 388 aa11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 SRLQ86TD4 932 aa11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 TRABD2AQ86V40 505 aa11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 EXOC3L1Q86VI1 746 aa11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 CNTN4Q8IWV2 1026 aa11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 SH2D3CQ8N5H7 860 aa11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 PCDH20Q8N6Y1 951 aaKnown RBP11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 PPHLN1Q8NEY8 458 aaKnown RBP11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 MZB1Q8WU39 189 aa11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 MTBPQ96DY7 904 aa11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 IFT43Q96FT9 208 aa11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 CERS2Q96G23 380 aa11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 NSMCE3Q96MG7 304 aa11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 FCRL3Q96P31 734 aaPredicted RBP11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 SRPK1Q96SB4 655 aaKnown RBP11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 APOL2Q9BQE5 337 aa11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 CPEB1Q9BZB8 566 aaKnown RBP11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 TTYH1Q9H313 450 aaPredicted RBP11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 CNOT10Q9H9A5 744 aaKnown RBP11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 SCUBE2Q9NQ36 999 aa11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 CHRAC1Q9NRG0 131 aa11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 NSMCE4AQ9NXX6 385 aa11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 NOVA2Q9UNW9 492 aaKnown RBP11.1□□□□□ -0.63
NPLOC4-203ENST00000570300 IQANK1A0A1B0GTG1 560 aa11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 A0A1W2PQ67 120 aa11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 WASH3PC4AMC7 463 aa11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 POC1B-GALNT4F8VUJ3 575 aa11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 SMAD6O43541 496 aaKnown RBP11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 TIMM44O43615 452 aa11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 ATP9BO43861 1147 aa11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 IGSF6O95976 241 aa11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 SRPRAP08240 638 aaKnown RBP11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 INHBAP08476 426 aa11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 SRCP12931 536 aa11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 EIF2DP41214 584 aaKnown RBP11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 SLCO1A2P46721 670 aa11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 ARCN1P48444 511 aaKnown RBP11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 SCNN1BP51168 640 aa11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 PPP2R2AP63151 447 aa11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 CRADDP78560 199 aa11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 ECT2LQ008S8 904 aa11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 GRM3Q14832 879 aa11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 EIF4HQ15056 248 aaKnown RBP11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 GAB4Q2WGN9 574 aa11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 TANGO2Q6ICL3 276 aa11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 TRMT10BQ6PF06 316 aaKnown RBP11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 VITQ6UXI7 678 aa11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 LINGO4Q6UY18 593 aa11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 TIFABQ6ZNK6 161 aa11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 CAPN12Q6ZSI9 719 aa11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 GET4Q7L5D6 327 aaPredicted RBP11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 LMNTD2Q8IXW0 634 aa11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 CYP4X1Q8N118 509 aa11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 MICALL1Q8N3F8 863 aa11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 SMRP1Q8NCR6 262 aa11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 BRSK1Q8TDC3 778 aa11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 SCG3Q8WXD2 468 aaKnown RBP11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 SUSD6Q92537 303 aa11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 BHMTQ93088 406 aa11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 VOPP1Q96AW1 172 aa11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 ALKBH8Q96BT7 664 aaKnown RBP11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 ASIC4Q96FT7 647 aa11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 TUBGCP5Q96RT8 1024 aa11.09□□□□□ -0.63
NPLOC4-203ENST00000570300 MCMBPQ9BTE3 642 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms