RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 PTPN9P43378 593 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 CPA2P48052 419 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 CTCFP49711 727 aaPredicted RBP3.95□□□□□ -1.78
UBR1-211ENST00000569971 OAZ1P54368 228 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 EFNB1P98172 346 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 HOXA4Q00056 320 aaPredicted RBP3.95□□□□□ -1.78
UBR1-211ENST00000569971 ZBTB16Q05516 673 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 NEXNQ0ZGT2 675 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 SEMA3AQ14563 771 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 ZNF169Q14929 603 aaPredicted RBP3.95□□□□□ -1.78
UBR1-211ENST00000569971 KPNB1Q14974 876 aaKnown RBP3.95□□□□□ -1.78
UBR1-211ENST00000569971 RILPL1Q5EBL4 403 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 ARL13AQ5H913 290 aaPredicted RBP3.95□□□□□ -1.78
UBR1-211ENST00000569971 BMP2KLQ5H9B9 411 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 SYCE2Q6PIF2 218 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 CASC1Q6TDU7 716 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 DHRS13Q6UX07 377 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 IKBIPQ70UQ0 350 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 SLC29A4Q7RTT9 530 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 RFX6Q8HWS3 928 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 RPAP2Q8IXW5 612 aaPredicted RBP3.95□□□□□ -1.78
UBR1-211ENST00000569971 IP6K1Q92551 441 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 HSPH1Q92598 858 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 TBC1D5Q92609 795 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 NSUN4Q96CB9 384 aaKnown RBP3.95□□□□□ -1.78
UBR1-211ENST00000569971 DAZAP1Q96EP5 407 aaKnown RBP3.95□□□□□ -1.78
UBR1-211ENST00000569971 SAAL1Q96ER3 474 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 PDLIM2Q96JY6 352 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 CCDC17Q96LX7 622 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 ADAD1Q96M93 576 aaKnown RBP3.95□□□□□ -1.78
UBR1-211ENST00000569971 KLHL15Q96M94 604 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 ZNF347Q96SE7 839 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 FTOQ9C0B1 505 aaKnown RBP eCLIP3.95□□□□□ -1.78
UBR1-211ENST00000569971 NKIRAS2Q9NYR9 191 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 ZNF215Q9UL58 517 aaPredicted RBP3.95□□□□□ -1.78
UBR1-211ENST00000569971 CORO1CQ9ULV4 474 aaPredicted RBP3.95□□□□□ -1.78
UBR1-211ENST00000569971 INSL6Q9Y581 213 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 PEAK1Q9H792 1746 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 MAP3K19Q56UN5 1328 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 CEP170BQ9Y4F5 1589 aaPredicted RBP3.94□□□□□ -1.78
UBR1-211ENST00000569971 RTL1A6NKG5 1358 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 KDRP35968 1356 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 hCG_1807616A0A1W2PRN6 198 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 LDLRAD4O15165 306 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 GCATO75600 419 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 GJB3O75712 270 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 HNRNPCP07910 306 aaKnown RBP eCLIP3.94□□□□□ -1.78
UBR1-211ENST00000569971 RARGP13631 454 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 PORP16435 677 aaPredicted RBP3.94□□□□□ -1.78
UBR1-211ENST00000569971 EIF3BP55884 814 aaKnown RBP3.94□□□□□ -1.78
UBR1-211ENST00000569971 MRPS21P82921 87 aaKnown RBP3.94□□□□□ -1.78
UBR1-211ENST00000569971 CREB5Q02930 508 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 TMEM115Q12893 351 aaPredicted RBP3.94□□□□□ -1.78
UBR1-211ENST00000569971 LARS2Q15031 903 aaKnown RBP3.94□□□□□ -1.78
UBR1-211ENST00000569971 MED22Q15528 200 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 PFKFB3Q16875 520 aaPredicted RBP3.94□□□□□ -1.78
UBR1-211ENST00000569971 ANXA2RQ3ZCQ2 193 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 FAM153CQ494X1 144 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 GLE1Q53GS7 698 aaKnown RBP3.94□□□□□ -1.78
UBR1-211ENST00000569971 TMEM63BQ5T3F8 832 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 TSTD2Q5T7W7 516 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 MFSD4BQ5TF39 518 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 TMEM81Q6P7N7 255 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 C17orf99Q6UX52 265 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 SERPINA13PQ6UXR4 307 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 RANBP10Q6VN20 620 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 TRIM72Q6ZMU5 477 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 MCM10Q7L590 875 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 RRM2BQ7LG56 351 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 ZNF804AQ7Z570 1209 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 TFAP2DQ7Z6R9 452 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 RHPN2Q8IUC4 686 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 LSMEM1Q8N8F7 131 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 NOC3LQ8WTT2 800 aaKnown RBP3.94□□□□□ -1.78
UBR1-211ENST00000569971 KLHL29Q96CT2 875 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 HIC2Q96JB3 615 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 GATA5Q9BWX5 397 aaPredicted RBP3.94□□□□□ -1.78
UBR1-211ENST00000569971 CADM1Q9BY67 442 aaKnown RBP3.94□□□□□ -1.78
UBR1-211ENST00000569971 NUAK2Q9H093 628 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 MUC13Q9H3R2 512 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 SYNCQ9H7C4 482 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 TXNRD2Q9NNW7 524 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 PLSCR4Q9NRQ2 329 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 BABAM1Q9NWV8 329 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 HCFC1R1Q9NWW0 138 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 MPP6Q9NZW5 540 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 CHMP5Q9NZZ3 219 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 PTGFRNQ9P2B2 879 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 NLKQ9UBE8 527 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 UPB1Q9UBR1 384 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 HSPB7Q9UBY9 170 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 TSPYL4Q9UJ04 414 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 PCDHGB4Q9UN71 923 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 LYVE1Q9Y5Y7 322 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 KCNE2Q9Y6J6 123 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 CRB1P82279 1406 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 SPATA31A5Q5VU36 1347 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 SPATA31A6Q5VVP1 1343 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 SPATA31A7Q8IWB4 1347 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 IGSF1Q8N6C5 1336 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms