RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 TREX1Q9NSU2 369 aa11.04□□□□□ -0.64
PDXDC1-216ENST00000569715 KCTD3Q9Y597 815 aa11.04□□□□□ -0.64
PDXDC1-216ENST00000569715 PCDHGC4Q9Y5F7 938 aa11.04□□□□□ -0.64
PDXDC1-216ENST00000569715 PDHA1P08559 390 aa11.04□□□□□ -0.64
PDXDC1-216ENST00000569715 PYGBP11216 843 aa11.04□□□□□ -0.64
PDXDC1-216ENST00000569715 STK19P49842 368 aaPredicted RBP11.04□□□□□ -0.64
PDXDC1-216ENST00000569715 CNGA3Q16281 694 aa11.04□□□□□ -0.64
PDXDC1-216ENST00000569715 TEDDM1Q5T9Z0 273 aa11.04□□□□□ -0.64
PDXDC1-216ENST00000569715 TRIM68Q6AZZ1 485 aa11.04□□□□□ -0.64
PDXDC1-216ENST00000569715 CCDC117Q8IWD4 279 aaPredicted RBP11.04□□□□□ -0.64
PDXDC1-216ENST00000569715 MYLIPQ8WY64 445 aa11.04□□□□□ -0.64
PDXDC1-216ENST00000569715 CDKL2Q92772 493 aa11.04□□□□□ -0.64
PDXDC1-216ENST00000569715 ATXN7L3BQ96GX2 97 aa11.04□□□□□ -0.64
PDXDC1-216ENST00000569715 RPL10LQ96L21 214 aaKnown RBP11.04□□□□□ -0.64
PDXDC1-216ENST00000569715 C2orf49Q9BVC5 232 aaPredicted RBP11.04□□□□□ -0.64
PDXDC1-216ENST00000569715 SPHK2Q9NRA0 654 aa11.04□□□□□ -0.64
PDXDC1-216ENST00000569715 IARS2Q9NSE4 1012 aaKnown RBP11.04□□□□□ -0.64
PDXDC1-216ENST00000569715 SENP1Q9P0U3 644 aa11.04□□□□□ -0.64
PDXDC1-216ENST00000569715 KIAA1522Q9P206 1035 aaPredicted RBP11.04□□□□□ -0.64
PDXDC1-216ENST00000569715 PRKAG3Q9UGI9 489 aa11.04□□□□□ -0.64
PDXDC1-216ENST00000569715 DOCK8Q8NF50 2099 aa11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 FAM47DPA6NHR8 397 aa11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 MT-ND3P03897 115 aa11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 SNRPAP09012 282 aaKnown RBP11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 TYRP14679 529 aa11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 WDR4P57081 412 aaKnown RBP11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 RHOAP61586 193 aa11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 TCEAL5Q5H9L2 206 aa11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 PITRM1Q5JRX3 1037 aa11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 ELMSAN1Q6PJG2 1045 aa11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 MRPL38Q96DV4 380 aaKnown RBP11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 ASIC4Q96FT7 647 aa11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 NUDCD1Q96RS6 583 aa11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 SOBPA7XYQ1 873 aa11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 BUD23O43709 281 aaKnown RBP11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 RFPL1O75677 317 aa11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 KRT37O76014 449 aa11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 VAPBO95292 243 aa11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 PAPLNO95428 1278 aa11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 PRLP01236 227 aa11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 CA4P22748 312 aa11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 ADRA1DP25100 572 aa11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 ARCN1P48444 511 aaKnown RBP11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 HYAL1Q12794 435 aa11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 TRAF2Q12933 501 aa11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 PTPRCAPQ14761 206 aa11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 PTPRRQ15256 657 aa11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 INO80DQ53TQ3 878 aaPredicted RBP11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 FAM78AQ5JUQ0 283 aa11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 GET4Q7L5D6 327 aaPredicted RBP11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 NAT16Q8N8M0 369 aa11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 PNPLA1Q8N8W4 532 aa11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 BANPQ8N9N5 519 aa11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 TIFAQ96CG3 184 aa11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 TDRD1Q9BXT4 1180 aaKnown RBP11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 GGT7Q9UJ14 662 aa11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 PRPF4O43172 522 aaKnown RBP eCLIP11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 TOP3BO95985 862 aaKnown RBP11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 FRG1Q14331 258 aaKnown RBP11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 ADGRG2Q8IZP9 1017 aa11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 BLOC1S5Q8TDH9 187 aa11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 DENND1AQ8TEH3 1009 aa11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 FGF13Q92913 245 aa11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 MRM3Q9HC36 420 aaKnown RBP11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 GRID1Q9ULK0 1009 aa11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 SPO11Q9Y5K1 396 aa11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 RAI2Q9Y5P3 530 aa11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 ARL5AQ9Y689 179 aa11.03□□□□□ -0.64
PDXDC1-216ENST00000569715 KRT38O76015 456 aa11.02□□□□□ -0.64
PDXDC1-216ENST00000569715 GKP32189 559 aa11.02□□□□□ -0.64
PDXDC1-216ENST00000569715 GMPRP36959 345 aa11.02□□□□□ -0.64
PDXDC1-216ENST00000569715 STRA8Q7Z7C7 330 aa11.02□□□□□ -0.64
PDXDC1-216ENST00000569715 OR13J1Q8NGT2 312 aa11.02□□□□□ -0.64
PDXDC1-216ENST00000569715 ZFYVE19Q96K21 471 aa11.02□□□□□ -0.64
PDXDC1-216ENST00000569715 TNKS2Q9H2K2 1166 aa11.02□□□□□ -0.64
PDXDC1-216ENST00000569715 SLC17A7Q9P2U7 560 aa11.02□□□□□ -0.64
PDXDC1-216ENST00000569715 HEATR9A2RTY3 570 aa11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 LDB2O43679 373 aa11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 ZNF821O75541 412 aaPredicted RBP11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 NDST3O95803 873 aa11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 ALDOAP04075 364 aaKnown RBP11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 FGF1P05230 155 aa11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 TCF3P15923 654 aa11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 HLA-DPA1P20036 260 aa11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 SP100P23497 879 aaPredicted RBP11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 ARSDP51689 593 aa11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 TSTD2Q5T7W7 516 aa11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 SYCE2Q6PIF2 218 aa11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 NCEH1Q6PIU2 408 aa11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 CDHR3Q6ZTQ4 885 aa11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 DENND6AQ8IWF6 608 aa11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 CELF5Q8N6W0 485 aaKnown RBP11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 ACVR1CQ8NER5 493 aa11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 PDCD6IPQ8WUM4 868 aaKnown RBP11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 PTCD2Q8WV60 388 aaKnown RBP11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 CENPTQ96BT3 561 aa11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 TBC1D14Q9P2M4 693 aa11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 A0A0U1RQS6 177 aa11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 MROH6A6NGR9 719 aa11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 AURKAO14965 403 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 690.8 ms