RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 ARL13BQ3SXY8 428 aa15.73■□□□□ 0.11
NME3-211ENST00000568561 GDPD4Q6W3E5 623 aa15.73■□□□□ 0.11
NME3-211ENST00000568561 ARCQ7LC44 396 aa15.73■□□□□ 0.11
NME3-211ENST00000568561 TTC7BQ86TV6 843 aa15.73■□□□□ 0.11
NME3-211ENST00000568561 PYROXD2Q8N2H3 581 aa15.73■□□□□ 0.11
NME3-211ENST00000568561 FAM172AQ8WUF8 416 aa15.73■□□□□ 0.11
NME3-211ENST00000568561 EXOC2Q96KP1 924 aa15.73■□□□□ 0.11
NME3-211ENST00000568561 BOCQ9BWV1 1114 aa15.73■□□□□ 0.11
NME3-211ENST00000568561 SEMA4CQ9C0C4 833 aa15.73■□□□□ 0.11
NME3-211ENST00000568561 CLPBQ9H078 707 aa15.73■□□□□ 0.11
NME3-211ENST00000568561 KLC2Q9H0B6 622 aa15.73■□□□□ 0.11
NME3-211ENST00000568561 MAGEH1Q9H213 219 aa15.73■□□□□ 0.11
NME3-211ENST00000568561 GANQ9H2C0 597 aa15.73■□□□□ 0.11
NME3-211ENST00000568561 NOL6Q9H6R4 1146 aaKnown RBP15.73■□□□□ 0.11
NME3-211ENST00000568561 TMEM51Q9NW97 253 aa15.73■□□□□ 0.11
NME3-211ENST00000568561 SALL4Q9UJQ4 1053 aa15.73■□□□□ 0.11
NME3-211ENST00000568561 HPCAL4Q9UM19 191 aa15.73■□□□□ 0.11
NME3-211ENST00000568561 COQ6Q9Y2Z9 468 aa15.73■□□□□ 0.11
NME3-211ENST00000568561 AHCTF1Q8WYP5 2266 aa15.72■□□□□ 0.11
NME3-211ENST00000568561 EPHB6O15197 1021 aa15.72■□□□□ 0.11
NME3-211ENST00000568561 INSIG1O15503 277 aa15.72■□□□□ 0.11
NME3-211ENST00000568561 BUB1O43683 1085 aa15.72■□□□□ 0.11
NME3-211ENST00000568561 POP4O95707 220 aaKnown RBP15.72■□□□□ 0.11
NME3-211ENST00000568561 CYP1A1P04798 512 aaPredicted RBP15.72■□□□□ 0.11
NME3-211ENST00000568561 PLEKP08567 350 aaPredicted RBP15.72■□□□□ 0.11
NME3-211ENST00000568561 KRT10P13645 584 aa15.72■□□□□ 0.11
NME3-211ENST00000568561 TSHRP16473 764 aa15.72■□□□□ 0.11
NME3-211ENST00000568561 UCNP55089 124 aa15.72■□□□□ 0.11
NME3-211ENST00000568561 GEMIN4P57678 1058 aaKnown RBP15.72■□□□□ 0.11
NME3-211ENST00000568561 CDR2Q01850 454 aa15.72■□□□□ 0.11
NME3-211ENST00000568561 C6orf132Q5T0Z8 1188 aa15.72■□□□□ 0.11
NME3-211ENST00000568561 FAXCQ5TGI0 409 aa15.72■□□□□ 0.11
NME3-211ENST00000568561 ZSCAN30Q86W11 494 aa15.72■□□□□ 0.11
NME3-211ENST00000568561 PLPP6Q8IY26 295 aa15.72■□□□□ 0.11
NME3-211ENST00000568561 CXorf40AQ8TE69 158 aa15.72■□□□□ 0.11
NME3-211ENST00000568561 ASB12Q8WXK4 309 aa15.72■□□□□ 0.11
NME3-211ENST00000568561 ARHGEF26Q96DR7 871 aa15.72■□□□□ 0.11
NME3-211ENST00000568561 PRR11Q96HE9 360 aaPredicted RBP15.72■□□□□ 0.11
NME3-211ENST00000568561 GDAP1L1Q96MZ0 367 aa15.72■□□□□ 0.11
NME3-211ENST00000568561 EPAS1Q99814 870 aa15.72■□□□□ 0.11
NME3-211ENST00000568561 CCDC3Q9BQI4 270 aa15.72■□□□□ 0.11
NME3-211ENST00000568561 OSBPL1AQ9BXW6 950 aa15.72■□□□□ 0.11
NME3-211ENST00000568561 NLRC4Q9NPP4 1024 aa15.72■□□□□ 0.11
NME3-211ENST00000568561 NCKIPSDQ9NZQ3 722 aa15.72■□□□□ 0.11
NME3-211ENST00000568561 SIRPGQ9P1W8 387 aa15.72■□□□□ 0.11
NME3-211ENST00000568561 LMO7DNF2Z398 122 aa15.71■□□□□ 0.11
NME3-211ENST00000568561 TPP1O14773 563 aa15.71■□□□□ 0.11
NME3-211ENST00000568561 YY2O15391 372 aa15.71■□□□□ 0.11
NME3-211ENST00000568561 KDELR3O43731 214 aa15.71■□□□□ 0.11
NME3-211ENST00000568561 TM7SF2O76062 418 aa15.71■□□□□ 0.11
NME3-211ENST00000568561 PIGNO95427 931 aa15.71■□□□□ 0.11
NME3-211ENST00000568561 ANXA6P08133 673 aa15.71■□□□□ 0.11
NME3-211ENST00000568561 ERCC5P28715 1186 aaPredicted RBP15.71■□□□□ 0.11
NME3-211ENST00000568561 EIF4A3P38919 411 aaKnown RBP15.71■□□□□ 0.11
NME3-211ENST00000568561 PTPN9P43378 593 aa15.71■□□□□ 0.11
NME3-211ENST00000568561 POLR2FP61218 127 aaKnown RBP15.71■□□□□ 0.11
NME3-211ENST00000568561 RHOAP61586 193 aa15.71■□□□□ 0.11
NME3-211ENST00000568561 RHDQ02161 417 aa15.71■□□□□ 0.11
NME3-211ENST00000568561 IRF4Q15306 451 aa15.71■□□□□ 0.11
NME3-211ENST00000568561 KLHL40Q2TBA0 621 aa15.71■□□□□ 0.11
NME3-211ENST00000568561 TCP11X2Q5H9J9 407 aa15.71■□□□□ 0.11
NME3-211ENST00000568561 KIAA1614Q5VZ46 1190 aa15.71■□□□□ 0.11
NME3-211ENST00000568561 MACC1Q6ZN28 852 aa15.71■□□□□ 0.11
NME3-211ENST00000568561 KYQ8NBH2 561 aa15.71■□□□□ 0.11
NME3-211ENST00000568561 TP53I13Q8NBR0 393 aaPredicted RBP15.71■□□□□ 0.11
NME3-211ENST00000568561 BTN2A2Q8WVV5 523 aa15.71■□□□□ 0.11
NME3-211ENST00000568561 SLC46A1Q96NT5 459 aa15.71■□□□□ 0.11
NME3-211ENST00000568561 PCDHB18PQ96TA0 734 aa15.71■□□□□ 0.11
NME3-211ENST00000568561 SLC13A1Q9BZW2 595 aa15.71■□□□□ 0.11
NME3-211ENST00000568561 FAM207AQ9NSI2 230 aaPredicted RBP15.71■□□□□ 0.11
NME3-211ENST00000568561 WDR70Q9NW82 654 aa15.71■□□□□ 0.11
NME3-211ENST00000568561 GULP1Q9UBP9 304 aa15.71■□□□□ 0.11
NME3-211ENST00000568561 SCN8AQ9UQD0 1980 aa15.7■□□□□ 0.1
NME3-211ENST00000568561 PYCARD-AS1I3L0S3 204 aa15.7■□□□□ 0.1
NME3-211ENST00000568561 IGSF6O95976 241 aa15.7■□□□□ 0.1
NME3-211ENST00000568561 TIMP2P16035 220 aa15.7■□□□□ 0.1
NME3-211ENST00000568561 RFC1P35251 1148 aaPredicted RBP15.7■□□□□ 0.1
NME3-211ENST00000568561 RPIAP49247 311 aa15.7■□□□□ 0.1
NME3-211ENST00000568561 VAC14Q08AM6 782 aa15.7■□□□□ 0.1
NME3-211ENST00000568561 PTP4A2Q12974 167 aa15.7■□□□□ 0.1
NME3-211ENST00000568561 SPIDRQ14159 915 aa15.7■□□□□ 0.1
NME3-211ENST00000568561 PTK2BQ14289 1009 aa15.7■□□□□ 0.1
NME3-211ENST00000568561 STRADAQ7RTN6 431 aa15.7■□□□□ 0.1
NME3-211ENST00000568561 B3GNT8Q7Z7M8 397 aa15.7■□□□□ 0.1
NME3-211ENST00000568561 ZNF677Q86XU0 584 aa15.7■□□□□ 0.1
NME3-211ENST00000568561 HID1Q8IV36 788 aa15.7■□□□□ 0.1
NME3-211ENST00000568561 PCDH19Q8TAB3 1148 aa15.7■□□□□ 0.1
NME3-211ENST00000568561 CENPIQ92674 756 aaPredicted RBP15.7■□□□□ 0.1
NME3-211ENST00000568561 GLMNQ92990 594 aa15.7■□□□□ 0.1
NME3-211ENST00000568561 HMCESQ96FZ2 354 aa15.7■□□□□ 0.1
NME3-211ENST00000568561 DPH1Q9BZG8 443 aa15.7■□□□□ 0.1
NME3-211ENST00000568561 TTYH3Q9C0H2 523 aa15.7■□□□□ 0.1
NME3-211ENST00000568561 VPS16Q9H269 839 aa15.7■□□□□ 0.1
NME3-211ENST00000568561 RABGEF1Q9UJ41 708 aa15.7■□□□□ 0.1
NME3-211ENST00000568561 PADI4Q9UM07 663 aa15.7■□□□□ 0.1
NME3-211ENST00000568561 CXorf51AA0A1B0GTR3 108 aa15.69■□□□□ 0.1
NME3-211ENST00000568561 AGRPO00253 132 aa15.69■□□□□ 0.1
NME3-211ENST00000568561 TCEA3O75764 348 aa15.69■□□□□ 0.1
NME3-211ENST00000568561 TNFSF15O95150 251 aa15.69■□□□□ 0.1
NME3-211ENST00000568561 GPD1P21695 349 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms