RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 ENDOD1O94919 500 aa13.97□□□□□ -0.17
SMG1-213ENST00000567737 CD2BP2O95400 341 aaKnown RBP13.97□□□□□ -0.17
SMG1-213ENST00000567737 PDIA4P13667 645 aaKnown RBP13.97□□□□□ -0.17
SMG1-213ENST00000567737 TCN2P20062 427 aa13.97□□□□□ -0.17
SMG1-213ENST00000567737 MAP4P27816 1152 aaKnown RBP13.97□□□□□ -0.17
SMG1-213ENST00000567737 HTR1BP28222 390 aa13.97□□□□□ -0.17
SMG1-213ENST00000567737 SLC39A14Q15043 492 aa13.97□□□□□ -0.17
SMG1-213ENST00000567737 ALG11Q2TAA5 492 aa13.97□□□□□ -0.17
SMG1-213ENST00000567737 AMZ1Q400G9 498 aa13.97□□□□□ -0.17
SMG1-213ENST00000567737 C14orf28Q4W4Y0 310 aa13.97□□□□□ -0.17
SMG1-213ENST00000567737 SYPL2Q5VXT5 272 aa13.97□□□□□ -0.17
SMG1-213ENST00000567737 LCLAT1Q6UWP7 414 aa13.97□□□□□ -0.17
SMG1-213ENST00000567737 ZC3H18Q86VM9 953 aaKnown RBP13.97□□□□□ -0.17
SMG1-213ENST00000567737 NLGN4XQ8N0W4 816 aa13.97□□□□□ -0.17
SMG1-213ENST00000567737 FBXL13Q8NEE6 735 aa13.97□□□□□ -0.17
SMG1-213ENST00000567737 NLGN4YQ8NFZ3 816 aaPredicted RBP13.97□□□□□ -0.17
SMG1-213ENST00000567737 PSMB7Q99436 277 aa13.97□□□□□ -0.17
SMG1-213ENST00000567737 SLC39A1Q9NY26 324 aa13.97□□□□□ -0.17
SMG1-213ENST00000567737 VANGL2Q9ULK5 521 aa13.97□□□□□ -0.17
SMG1-213ENST00000567737 ITM2BQ9Y287 266 aa13.97□□□□□ -0.17
SMG1-213ENST00000567737 LOC101059948A0A1B0GTJ6 334 aa13.96□□□□□ -0.17
SMG1-213ENST00000567737 TMEM110-MUSTN1A8MSY1 372 aa13.96□□□□□ -0.17
SMG1-213ENST00000567737 ZW10O43264 779 aa13.96□□□□□ -0.17
SMG1-213ENST00000567737 TRUB2O95900 331 aaKnown RBP13.96□□□□□ -0.17
SMG1-213ENST00000567737 RHOCP08134 193 aa13.96□□□□□ -0.17
SMG1-213ENST00000567737 SLC2A3P11169 496 aa13.96□□□□□ -0.17
SMG1-213ENST00000567737 GTF2H1P32780 548 aa13.96□□□□□ -0.17
SMG1-213ENST00000567737 CSTF2P33240 577 aaKnown RBP eCLIP13.96□□□□□ -0.17
SMG1-213ENST00000567737 ABL2P42684 1182 aa13.96□□□□□ -0.17
SMG1-213ENST00000567737 MXI1P50539 228 aa13.96□□□□□ -0.17
SMG1-213ENST00000567737 PEX5P50542 639 aa13.96□□□□□ -0.17
SMG1-213ENST00000567737 ENPEPQ07075 957 aa13.96□□□□□ -0.17
SMG1-213ENST00000567737 STK4Q13043 487 aa13.96□□□□□ -0.17
SMG1-213ENST00000567737 CLPPQ16740 277 aaPredicted RBP13.96□□□□□ -0.17
SMG1-213ENST00000567737 EIF2S3LQ2VIR3 472 aaKnown RBP13.96□□□□□ -0.17
SMG1-213ENST00000567737 CRTC2Q53ET0 693 aaPredicted RBP13.96□□□□□ -0.17
SMG1-213ENST00000567737 DCAF12Q5T6F0 453 aa13.96□□□□□ -0.17
SMG1-213ENST00000567737 FAM173BQ6P4H8 233 aa13.96□□□□□ -0.17
SMG1-213ENST00000567737 OGFOD3Q6PK18 319 aa13.96□□□□□ -0.17
SMG1-213ENST00000567737 ENPP7Q6UWV6 458 aa13.96□□□□□ -0.17
SMG1-213ENST00000567737 LINGO4Q6UY18 593 aa13.96□□□□□ -0.17
SMG1-213ENST00000567737 BEND5Q7L4P6 421 aa13.96□□□□□ -0.17
SMG1-213ENST00000567737 FAM186BQ8IYM0 893 aa13.96□□□□□ -0.17
SMG1-213ENST00000567737 NRSN1Q8IZ57 195 aa13.96□□□□□ -0.17
SMG1-213ENST00000567737 DCAF4L2Q8NA75 395 aa13.96□□□□□ -0.17
SMG1-213ENST00000567737 KIAA0895Q8NCT3 520 aa13.96□□□□□ -0.17
SMG1-213ENST00000567737 AGBL5Q8NDL9 886 aa13.96□□□□□ -0.17
SMG1-213ENST00000567737 FAM46DQ8NEK8 389 aa13.96□□□□□ -0.17
SMG1-213ENST00000567737 PRR7Q8TB68 274 aa13.96□□□□□ -0.17
SMG1-213ENST00000567737 ARHGEF26Q96DR7 871 aa13.96□□□□□ -0.17
SMG1-213ENST00000567737 CCDC74BQ96LY2 380 aa13.96□□□□□ -0.17
SMG1-213ENST00000567737 REPIN1Q9BWE0 567 aaKnown RBP13.96□□□□□ -0.17
SMG1-213ENST00000567737 TBC1D30Q9Y2I9 924 aa13.96□□□□□ -0.17
SMG1-213ENST00000567737 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.96□□□□□ -0.17
SMG1-213ENST00000567737 KCNMB2Q9Y691 235 aa13.96□□□□□ -0.17
SMG1-213ENST00000567737 OTOGQ6ZRI0 2925 aa13.96□□□□□ -0.18
SMG1-213ENST00000567737 POLQO75417 2590 aa13.95□□□□□ -0.18
SMG1-213ENST00000567737 IGHV5-10-1A0A0J9YXX1 117 aa13.95□□□□□ -0.18
SMG1-213ENST00000567737 B4DGG1 531 aa13.95□□□□□ -0.18
SMG1-213ENST00000567737 TM7SF2O76062 418 aa13.95□□□□□ -0.18
SMG1-213ENST00000567737 TNFP01375 233 aa13.95□□□□□ -0.18
SMG1-213ENST00000567737 DNA2P51530 1060 aa13.95□□□□□ -0.18
SMG1-213ENST00000567737 IRAK1P51617 712 aa13.95□□□□□ -0.18
SMG1-213ENST00000567737 CDH4P55283 916 aa13.95□□□□□ -0.18
SMG1-213ENST00000567737 RAB15P59190 212 aa13.95□□□□□ -0.18
SMG1-213ENST00000567737 SRP54P61011 504 aaKnown RBP13.95□□□□□ -0.18
SMG1-213ENST00000567737 B4GALNT1Q00973 533 aa13.95□□□□□ -0.18
SMG1-213ENST00000567737 TRA2AQ13595 282 aaKnown RBP eCLIP13.95□□□□□ -0.18
SMG1-213ENST00000567737 CUL2Q13617 745 aa13.95□□□□□ -0.18
SMG1-213ENST00000567737 CUL4BQ13620 913 aa13.95□□□□□ -0.18
SMG1-213ENST00000567737 AUHQ13825 339 aaKnown RBP13.95□□□□□ -0.18
SMG1-213ENST00000567737 HLTFQ14527 1009 aaKnown RBP eCLIP13.95□□□□□ -0.18
SMG1-213ENST00000567737 EDRF1Q3B7T1 1238 aa13.95□□□□□ -0.18
SMG1-213ENST00000567737 ATP1A1-AS1Q5TC04 95 aa13.95□□□□□ -0.18
SMG1-213ENST00000567737 KDELC2Q7Z4H8 507 aa13.95□□□□□ -0.18
SMG1-213ENST00000567737 TAF8Q7Z7C8 310 aa13.95□□□□□ -0.18
SMG1-213ENST00000567737 UNC5BQ8IZJ1 945 aa13.95□□□□□ -0.18
SMG1-213ENST00000567737 SLC34A3Q8N130 599 aa13.95□□□□□ -0.18
SMG1-213ENST00000567737 ATL2Q8NHH9 583 aa13.95□□□□□ -0.18
SMG1-213ENST00000567737 USP28Q96RU2 1077 aa13.95□□□□□ -0.18
SMG1-213ENST00000567737 RBM15Q96T37 977 aaKnown RBP eCLIP13.95□□□□□ -0.18
SMG1-213ENST00000567737 NUDT22Q9BRQ3 303 aa13.95□□□□□ -0.18
SMG1-213ENST00000567737 ZDHHC6Q9H6R6 413 aa13.95□□□□□ -0.18
SMG1-213ENST00000567737 MBNL1Q9NR56 388 aaKnown RBP13.95□□□□□ -0.18
SMG1-213ENST00000567737 EXOC1Q9NV70 894 aa13.95□□□□□ -0.18
SMG1-213ENST00000567737 KLQ9UEF7 1012 aa13.95□□□□□ -0.18
SMG1-213ENST00000567737 PILRAQ9UKJ1 303 aa13.95□□□□□ -0.18
SMG1-213ENST00000567737 MAP4K5Q9Y4K4 846 aa13.95□□□□□ -0.18
SMG1-213ENST00000567737 ITPR3Q14573 2671 aa13.95□□□□□ -0.18
SMG1-213ENST00000567737 C16orf96A6NNT2 1141 aa13.94□□□□□ -0.18
SMG1-213ENST00000567737 IGLV3-25P01717 112 aa13.94□□□□□ -0.18
SMG1-213ENST00000567737 NR2F2P24468 414 aa13.94□□□□□ -0.18
SMG1-213ENST00000567737 CCR1P32246 355 aa13.94□□□□□ -0.18
SMG1-213ENST00000567737 PSMC2P35998 433 aaKnown RBP13.94□□□□□ -0.18
SMG1-213ENST00000567737 CCNHP51946 323 aaPredicted RBP13.94□□□□□ -0.18
SMG1-213ENST00000567737 NFATC4Q14934 902 aa13.94□□□□□ -0.18
SMG1-213ENST00000567737 CARD16Q5EG05 197 aa13.94□□□□□ -0.18
SMG1-213ENST00000567737 SWT1Q5T5J6 900 aaKnown RBP13.94□□□□□ -0.18
SMG1-213ENST00000567737 TIPARPQ7Z3E1 657 aaKnown RBP13.94□□□□□ -0.18
SMG1-213ENST00000567737 FAM129CQ86XR2 697 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms