RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 KLK7P49862 253 aa18.84■□□□□ 0.61
LINC01238-205ENST00000567549 ZNF135P52742 658 aaPredicted RBP18.84■□□□□ 0.61
LINC01238-205ENST00000567549 TPI1P60174 286 aa18.84■□□□□ 0.61
LINC01238-205ENST00000567549 ERVPABLB-1P60509 514 aa18.84■□□□□ 0.61
LINC01238-205ENST00000567549 PFN3P60673 137 aa18.84■□□□□ 0.61
LINC01238-205ENST00000567549 PTP4A2Q12974 167 aa18.84■□□□□ 0.61
LINC01238-205ENST00000567549 SOWAHCQ53LP3 525 aaPredicted RBP18.84■□□□□ 0.61
LINC01238-205ENST00000567549 FAM72AQ5TYM5 149 aa18.84■□□□□ 0.61
LINC01238-205ENST00000567549 FAM72DQ6L9T8 149 aa18.84■□□□□ 0.61
LINC01238-205ENST00000567549 ESRP1Q6NXG1 681 aaKnown RBP18.84■□□□□ 0.61
LINC01238-205ENST00000567549 MON1BQ7L1V2 547 aa18.84■□□□□ 0.61
LINC01238-205ENST00000567549 PHLDB2Q86SQ0 1253 aa18.84■□□□□ 0.61
LINC01238-205ENST00000567549 FAM72BQ86X60 149 aa18.84■□□□□ 0.61
LINC01238-205ENST00000567549 UMODL1-AS1Q8N2C9 162 aa18.84■□□□□ 0.61
LINC01238-205ENST00000567549 FSTL5Q8N475 847 aaPredicted RBP18.84■□□□□ 0.61
LINC01238-205ENST00000567549 IFI44Q8TCB0 444 aa18.84■□□□□ 0.61
LINC01238-205ENST00000567549 LMX1AQ8TE12 382 aa18.84■□□□□ 0.61
LINC01238-205ENST00000567549 ZNF641Q96N77 438 aaPredicted RBP18.84■□□□□ 0.61
LINC01238-205ENST00000567549 MCEEQ96PE7 176 aa18.84■□□□□ 0.61
LINC01238-205ENST00000567549 LGMNQ99538 433 aa18.84■□□□□ 0.61
LINC01238-205ENST00000567549 KLF6Q99612 283 aaPredicted RBP18.84■□□□□ 0.61
LINC01238-205ENST00000567549 THSD1Q9NS62 852 aa18.84■□□□□ 0.61
LINC01238-205ENST00000567549 NDFIP2Q9NV92 336 aa18.84■□□□□ 0.61
LINC01238-205ENST00000567549 UBA2Q9UBT2 640 aaPredicted RBP18.84■□□□□ 0.61
LINC01238-205ENST00000567549 DOLKQ9UPQ8 538 aa18.84■□□□□ 0.61
LINC01238-205ENST00000567549 ARHGAP42A6NI28 874 aa18.83■□□□□ 0.6
LINC01238-205ENST00000567549 RASA4BC9J798 803 aa18.83■□□□□ 0.6
LINC01238-205ENST00000567549 CCP110O43303 1012 aa18.83■□□□□ 0.6
LINC01238-205ENST00000567549 RASA4O43374 803 aa18.83■□□□□ 0.6
LINC01238-205ENST00000567549 TCEA3O75764 348 aa18.83■□□□□ 0.6
LINC01238-205ENST00000567549 MBD3O95983 291 aa18.83■□□□□ 0.6
LINC01238-205ENST00000567549 ALPIP09923 528 aa18.83■□□□□ 0.6
LINC01238-205ENST00000567549 PEX5P50542 639 aa18.83■□□□□ 0.6
LINC01238-205ENST00000567549 NDST2P52849 883 aa18.83■□□□□ 0.6
LINC01238-205ENST00000567549 CLDN6P56747 220 aa18.83■□□□□ 0.6
LINC01238-205ENST00000567549 PPARDQ03181 441 aa18.83■□□□□ 0.6
LINC01238-205ENST00000567549 SERINC3Q13530 473 aa18.83■□□□□ 0.6
LINC01238-205ENST00000567549 FGL2Q14314 439 aa18.83■□□□□ 0.6
LINC01238-205ENST00000567549 ELOCQ15369 112 aa18.83■□□□□ 0.6
LINC01238-205ENST00000567549 ZNF542PQ5EBM4 170 aa18.83■□□□□ 0.6
LINC01238-205ENST00000567549 ARTNQ5T4W7 220 aa18.83■□□□□ 0.6
LINC01238-205ENST00000567549 FAXCQ5TGI0 409 aa18.83■□□□□ 0.6
LINC01238-205ENST00000567549 CDCP2Q5VXM1 449 aa18.83■□□□□ 0.6
LINC01238-205ENST00000567549 BRAT1Q6PJG6 821 aa18.83■□□□□ 0.6
LINC01238-205ENST00000567549 MACC1Q6ZN28 852 aa18.83■□□□□ 0.6
LINC01238-205ENST00000567549 VPS36Q86VN1 386 aa18.83■□□□□ 0.6
LINC01238-205ENST00000567549 PAF1Q8N7H5 531 aa18.83■□□□□ 0.6
LINC01238-205ENST00000567549 CCDC97Q96F63 343 aaPredicted RBP18.83■□□□□ 0.6
LINC01238-205ENST00000567549 TUBGCP5Q96RT8 1024 aa18.83■□□□□ 0.6
LINC01238-205ENST00000567549 POLR1BQ9H9Y6 1135 aa18.83■□□□□ 0.6
LINC01238-205ENST00000567549 PARVAQ9NVD7 372 aa18.83■□□□□ 0.6
LINC01238-205ENST00000567549 FZD10Q9ULW2 581 aa18.83■□□□□ 0.6
LINC01238-205ENST00000567549 NEU3Q9UQ49 428 aa18.83■□□□□ 0.6
LINC01238-205ENST00000567549 TEX51A0A1B0GUA7 166 aa18.82■□□□□ 0.6
LINC01238-205ENST00000567549 CAPN8A6NHC0 703 aa18.82■□□□□ 0.6
LINC01238-205ENST00000567549 EPHB6O15197 1021 aa18.82■□□□□ 0.6
LINC01238-205ENST00000567549 RAD51BO15315 384 aa18.82■□□□□ 0.6
LINC01238-205ENST00000567549 DAPK3O43293 454 aa18.82■□□□□ 0.6
LINC01238-205ENST00000567549 LZTS3O60299 673 aaPredicted RBP18.82■□□□□ 0.6
LINC01238-205ENST00000567549 USP12O75317 370 aa18.82■□□□□ 0.6
LINC01238-205ENST00000567549 CSO75390 466 aaKnown RBP18.82■□□□□ 0.6
LINC01238-205ENST00000567549 RNF8O76064 485 aa18.82■□□□□ 0.6
LINC01238-205ENST00000567549 DXOO77932 396 aaKnown RBP18.82■□□□□ 0.6
LINC01238-205ENST00000567549 HOXB3P14651 431 aaPredicted RBP18.82■□□□□ 0.6
LINC01238-205ENST00000567549 TNFAIP3P21580 790 aa18.82■□□□□ 0.6
LINC01238-205ENST00000567549 NFKBIAP25963 317 aa18.82■□□□□ 0.6
LINC01238-205ENST00000567549 LSSP48449 732 aa18.82■□□□□ 0.6
LINC01238-205ENST00000567549 KLHL40Q2TBA0 621 aa18.82■□□□□ 0.6
LINC01238-205ENST00000567549 FILIP1LQ4L180 1135 aa18.82■□□□□ 0.6
LINC01238-205ENST00000567549 ATXN7L2Q5T6C5 722 aaPredicted RBP18.82■□□□□ 0.6
LINC01238-205ENST00000567549 ACAD10Q6JQN1 1059 aa18.82■□□□□ 0.6
LINC01238-205ENST00000567549 PHACTR4Q8IZ21 702 aa18.82■□□□□ 0.6
LINC01238-205ENST00000567549 CENPTQ96BT3 561 aa18.82■□□□□ 0.6
LINC01238-205ENST00000567549 PCDHB18PQ96TA0 734 aa18.82■□□□□ 0.6
LINC01238-205ENST00000567549 ITPR1Q14643 2758 aa18.81■□□□□ 0.6
LINC01238-205ENST00000567549 CPED1A4D0V7 1026 aa18.81■□□□□ 0.6
LINC01238-205ENST00000567549 EME2A4GXA9 379 aaPredicted RBP18.81■□□□□ 0.6
LINC01238-205ENST00000567549 LMO7DNF2Z398 122 aa18.81■□□□□ 0.6
LINC01238-205ENST00000567549 RNF103O00237 685 aa18.81■□□□□ 0.6
LINC01238-205ENST00000567549 TLX3O43711 291 aaPredicted RBP18.81■□□□□ 0.6
LINC01238-205ENST00000567549 GIMD1P0DJR0 217 aa18.81■□□□□ 0.6
LINC01238-205ENST00000567549 RBMS1P29558 406 aaKnown RBP18.81■□□□□ 0.6
LINC01238-205ENST00000567549 GKP32189 559 aa18.81■□□□□ 0.6
LINC01238-205ENST00000567549 MLLT3P42568 568 aaPredicted RBP18.81■□□□□ 0.6
LINC01238-205ENST00000567549 POLR2LP62875 67 aaKnown RBP18.81■□□□□ 0.6
LINC01238-205ENST00000567549 GABREP78334 506 aa18.81■□□□□ 0.6
LINC01238-205ENST00000567549 LRRC14Q15048 493 aa18.81■□□□□ 0.6
LINC01238-205ENST00000567549 PRRT3Q5FWE3 981 aa18.81■□□□□ 0.6
LINC01238-205ENST00000567549 LVRNQ6Q4G3 990 aa18.81■□□□□ 0.6
LINC01238-205ENST00000567549 RBM44Q6ZP01 1051 aaKnown RBP18.81■□□□□ 0.6
LINC01238-205ENST00000567549 GPR155Q7Z3F1 870 aa18.81■□□□□ 0.6
LINC01238-205ENST00000567549 MCOLN2Q8IZK6 566 aa18.81■□□□□ 0.6
LINC01238-205ENST00000567549 OR6C4Q8NGE1 309 aa18.81■□□□□ 0.6
LINC01238-205ENST00000567549 HMCESQ96FZ2 354 aa18.81■□□□□ 0.6
LINC01238-205ENST00000567549 FCRL3Q96P31 734 aaPredicted RBP18.81■□□□□ 0.6
LINC01238-205ENST00000567549 ATP13A3Q9H7F0 1226 aa18.81■□□□□ 0.6
LINC01238-205ENST00000567549 ACTL7AQ9Y615 435 aa18.81■□□□□ 0.6
LINC01238-205ENST00000567549 NBEAQ8NFP9 2946 aa18.8■□□□□ 0.6
LINC01238-205ENST00000567549 TMX2-CTNND1H3BSU7 103 aa18.8■□□□□ 0.6
LINC01238-205ENST00000567549 MMP20O60882 483 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms