RNA–Protein interactions for RNA: ENST00000567279.5

BBS4-213, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 1,876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-213ENST00000567279 TLE6Q9H808 572 aa11.85□□□□□ -0.51
BBS4-213ENST00000567279 TREX1Q9NSU2 369 aa11.85□□□□□ -0.51
BBS4-213ENST00000567279 NSMCE4AQ9NXX6 385 aa11.85□□□□□ -0.51
BBS4-213ENST00000567279 LHX3Q9UBR4 397 aa11.85□□□□□ -0.51
BBS4-213ENST00000567279 CLEC4EQ9ULY5 219 aa11.85□□□□□ -0.51
BBS4-213ENST00000567279 CHD7Q9P2D1 2997 aa11.84□□□□□ -0.51
BBS4-213ENST00000567279 ZNF197O14709 1029 aa11.84□□□□□ -0.51
BBS4-213ENST00000567279 NDST3O95803 873 aa11.84□□□□□ -0.51
BBS4-213ENST00000567279 CD160O95971 181 aa11.84□□□□□ -0.51
BBS4-213ENST00000567279 ALADP13716 330 aa11.84□□□□□ -0.51
BBS4-213ENST00000567279 CR2P20023 1033 aa11.84□□□□□ -0.51
BBS4-213ENST00000567279 CD70P32970 193 aa11.84□□□□□ -0.51
BBS4-213ENST00000567279 NRIP1P48552 1158 aa11.84□□□□□ -0.51
BBS4-213ENST00000567279 LIMK2P53671 638 aa11.84□□□□□ -0.51
BBS4-213ENST00000567279 CSE1LP55060 971 aaKnown RBP11.84□□□□□ -0.51
BBS4-213ENST00000567279 PDE1BQ01064 536 aa11.84□□□□□ -0.51
BBS4-213ENST00000567279 USP4Q13107 963 aa11.84□□□□□ -0.51
BBS4-213ENST00000567279 THOC5Q13769 683 aaKnown RBP11.84□□□□□ -0.51
BBS4-213ENST00000567279 ZNF77Q15935 545 aa11.84□□□□□ -0.51
BBS4-213ENST00000567279 CNGA3Q16281 694 aa11.84□□□□□ -0.51
BBS4-213ENST00000567279 QPCTQ16769 361 aa11.84□□□□□ -0.51
BBS4-213ENST00000567279 MPP7Q5T2T1 576 aa11.84□□□□□ -0.51
BBS4-213ENST00000567279 TSTD2Q5T7W7 516 aa11.84□□□□□ -0.51
BBS4-213ENST00000567279 FYB2Q5VWT5 728 aa11.84□□□□□ -0.51
BBS4-213ENST00000567279 PPP2R2DQ66LE6 453 aa11.84□□□□□ -0.51
BBS4-213ENST00000567279 TIFABQ6ZNK6 161 aa11.84□□□□□ -0.51
BBS4-213ENST00000567279 NDUFAF2Q8N183 169 aa11.84□□□□□ -0.51
BBS4-213ENST00000567279 C12orf76Q8N812 135 aaPredicted RBP11.84□□□□□ -0.51
BBS4-213ENST00000567279 BLOC1S5Q8TDH9 187 aa11.84□□□□□ -0.51
BBS4-213ENST00000567279 SMG7Q92540 1137 aaKnown RBP11.84□□□□□ -0.51
BBS4-213ENST00000567279 NSMCE3Q96MG7 304 aa11.84□□□□□ -0.51
BBS4-213ENST00000567279 FAM111AQ96PZ2 611 aa11.84□□□□□ -0.51
BBS4-213ENST00000567279 NUDCD1Q96RS6 583 aa11.84□□□□□ -0.51
BBS4-213ENST00000567279 SRPK1Q96SB4 655 aaKnown RBP11.84□□□□□ -0.51
BBS4-213ENST00000567279 PBX4Q9BYU1 374 aa11.84□□□□□ -0.51
BBS4-213ENST00000567279 SLC13A1Q9BZW2 595 aa11.84□□□□□ -0.51
BBS4-213ENST00000567279 KIAA1522Q9P206 1035 aaPredicted RBP11.84□□□□□ -0.51
BBS4-213ENST00000567279 GRID1Q9ULK0 1009 aa11.84□□□□□ -0.51
BBS4-213ENST00000567279 CHKBQ9Y259 395 aa11.84□□□□□ -0.51
BBS4-213ENST00000567279 FCF1Q9Y324 198 aaKnown RBP11.84□□□□□ -0.51
BBS4-213ENST00000567279 MRPS23Q9Y3D9 190 aaKnown RBP11.84□□□□□ -0.51
BBS4-213ENST00000567279 ALDOAP04075 364 aaKnown RBP11.83□□□□□ -0.52
BBS4-213ENST00000567279 PRKCGP05129 697 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 POU2F2P09086 479 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 PIRTP0C851 137 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 ARNTP27540 789 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 FOXN2P32314 431 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 DNAJC3Q13217 504 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 GLIPR1L2Q4G1C9 344 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 ARMC3Q5W041 872 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 MICALCLQ6ZW33 695 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 DCLK2Q8N568 766 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 FIBINQ8TAL6 211 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 ATP2A3Q93084 1043 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 ZSWIM3Q96MP5 696 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 TRIB3Q96RU7 358 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 MKS1Q9NXB0 559 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 C2orf16Q68DN1 1984 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 MYOFQ9NZM1 2061 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 WDR91A4D1P6 747 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 SOBPA7XYQ1 873 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 NEDD8-MDP1E9PL57 170 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 TIMM44O43615 452 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 MT-CO1P00395 513 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 EPOP01588 193 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 TAC1P20366 129 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 CES1P23141 567 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 ARCN1P48444 511 aaKnown RBP11.83□□□□□ -0.52
BBS4-213ENST00000567279 SERPINB8P50452 374 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 MPP1Q00013 466 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 MSLNQ13421 630 aaPredicted RBP11.83□□□□□ -0.52
BBS4-213ENST00000567279 DUSP6Q16828 381 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 PLEKHG6Q3KR16 790 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 INO80DQ53TQ3 878 aaPredicted RBP11.83□□□□□ -0.52
BBS4-213ENST00000567279 ATXN7L2Q5T6C5 722 aaPredicted RBP11.83□□□□□ -0.52
BBS4-213ENST00000567279 RNF43Q68DV7 783 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 ZNF470Q6ECI4 717 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 RETSATQ6NUM9 610 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 TMC5Q6UXY8 1006 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 CDHR3Q6ZTQ4 885 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 OTUD6BQ8N6M0 293 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 LPCAT1Q8NF37 534 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 ITFG1Q8TB96 612 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 LRRC8CQ8TDW0 803 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 PTPRN2Q92932 1015 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 RMDN1Q96DB5 314 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 FAM167BQ9BTA0 163 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 TDRD1Q9BXT4 1180 aaKnown RBP11.83□□□□□ -0.52
BBS4-213ENST00000567279 LMAN2LQ9H0V9 348 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 ABCB8Q9NUT2 735 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 FGFR1OP2Q9NVK5 253 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.83□□□□□ -0.52
BBS4-213ENST00000567279 GGT7Q9UJ14 662 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 MSRAQ9UJ68 235 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 RAI2Q9Y5P3 530 aa11.83□□□□□ -0.52
BBS4-213ENST00000567279 K7ERQ8 282 aa11.82□□□□□ -0.52
BBS4-213ENST00000567279 PAPSS2O95340 614 aaPredicted RBP11.82□□□□□ -0.52
BBS4-213ENST00000567279 TOP3BO95985 862 aaKnown RBP11.82□□□□□ -0.52
BBS4-213ENST00000567279 SLC1A2P43004 574 aa11.82□□□□□ -0.52
BBS4-213ENST00000567279 SF3A3Q12874 501 aaKnown RBP eCLIP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms