RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 LGALS12Q96DT0 336 aa2.33□□□□□ -2.04
SMG1-212ENST00000566328 TMEM19Q96HH6 336 aa2.33□□□□□ -2.04
SMG1-212ENST00000566328 DCTN5Q9BTE1 182 aa2.33□□□□□ -2.04
SMG1-212ENST00000566328 ACAD9Q9H845 621 aa2.33□□□□□ -2.04
SMG1-212ENST00000566328 WDR6Q9NNW5 1121 aaKnown RBP2.33□□□□□ -2.04
SMG1-212ENST00000566328 TAAR2Q9P1P5 351 aa2.33□□□□□ -2.04
SMG1-212ENST00000566328 PRSS21Q9Y6M0 314 aa2.33□□□□□ -2.04
SMG1-212ENST00000566328 ATXN2Q99700 1313 aaKnown RBP2.33□□□□□ -2.04
SMG1-212ENST00000566328 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.32□□□□□ -2.04
SMG1-212ENST00000566328 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.32□□□□□ -2.04
SMG1-212ENST00000566328 J3KR12 359 aa2.32□□□□□ -2.04
SMG1-212ENST00000566328 CAPN9O14815 690 aa2.32□□□□□ -2.04
SMG1-212ENST00000566328 DHX16O60231 1041 aaKnown RBP2.32□□□□□ -2.04
SMG1-212ENST00000566328 TUBBP07437 444 aa2.32□□□□□ -2.04
SMG1-212ENST00000566328 CD53P19397 219 aa2.32□□□□□ -2.04
SMG1-212ENST00000566328 FMO5P49326 533 aa2.32□□□□□ -2.04
SMG1-212ENST00000566328 DRG2P55039 364 aaKnown RBP2.32□□□□□ -2.04
SMG1-212ENST00000566328 LINC01547P58512 204 aaPredicted RBP2.32□□□□□ -2.04
SMG1-212ENST00000566328 TUBB4BP68371 445 aa2.32□□□□□ -2.04
SMG1-212ENST00000566328 GRIK2Q13002 908 aa2.32□□□□□ -2.04
SMG1-212ENST00000566328 DCTN1Q14203 1278 aa2.32□□□□□ -2.04
SMG1-212ENST00000566328 ZNF876PQ49A33 203 aa2.32□□□□□ -2.04
SMG1-212ENST00000566328 ZC2HC1BQ5TFG8 222 aa2.32□□□□□ -2.04
SMG1-212ENST00000566328 STXBP4Q6ZWJ1 553 aa2.32□□□□□ -2.04
SMG1-212ENST00000566328 SLC9B2Q86UD5 537 aa2.32□□□□□ -2.04
SMG1-212ENST00000566328 GTSCR1Q86UQ5 136 aa2.32□□□□□ -2.04
SMG1-212ENST00000566328 ZC3HC1Q86WB0 502 aaKnown RBP2.32□□□□□ -2.04
SMG1-212ENST00000566328 CIARTQ8N365 385 aaPredicted RBP2.32□□□□□ -2.04
SMG1-212ENST00000566328 OR2C3Q8N628 320 aa2.32□□□□□ -2.04
SMG1-212ENST00000566328 PTGR2Q8N8N7 351 aaPredicted RBP2.32□□□□□ -2.04
SMG1-212ENST00000566328 ADAD2Q8NCV1 583 aaKnown RBP2.32□□□□□ -2.04
SMG1-212ENST00000566328 MAPK1IP1LQ8NDC0 245 aa2.32□□□□□ -2.04
SMG1-212ENST00000566328 CREB3L4Q8TEY5 395 aa2.32□□□□□ -2.04
SMG1-212ENST00000566328 LITAFQ99732 161 aa2.32□□□□□ -2.04
SMG1-212ENST00000566328 UBXN6Q9BZV1 441 aa2.32□□□□□ -2.04
SMG1-212ENST00000566328 CLPBQ9H078 707 aa2.32□□□□□ -2.04
SMG1-212ENST00000566328 CERS4Q9HA82 394 aa2.32□□□□□ -2.04
SMG1-212ENST00000566328 SPATS2LQ9NUQ6 558 aaKnown RBP2.32□□□□□ -2.04
SMG1-212ENST00000566328 FAM118AQ9NWS6 357 aa2.32□□□□□ -2.04
SMG1-212ENST00000566328 ANKRD10Q9NXR5 420 aa2.32□□□□□ -2.04
SMG1-212ENST00000566328 OGFRQ9NZT2 677 aa2.32□□□□□ -2.04
SMG1-212ENST00000566328 NDUFAF4Q9P032 175 aa2.32□□□□□ -2.04
SMG1-212ENST00000566328 C19orf53Q9UNZ5 99 aaPredicted RBP2.32□□□□□ -2.04
SMG1-212ENST00000566328 FAM50BQ9Y247 325 aa2.32□□□□□ -2.04
SMG1-212ENST00000566328 ASPDHA6ND91 283 aa2.31□□□□□ -2.04
SMG1-212ENST00000566328 PMS2P5A8MQ11 134 aa2.31□□□□□ -2.04
SMG1-212ENST00000566328 ZNF587BE7ETH6 402 aa2.31□□□□□ -2.04
SMG1-212ENST00000566328 WNT9BO14905 357 aa2.31□□□□□ -2.04
SMG1-212ENST00000566328 HSPA12AO43301 675 aa2.31□□□□□ -2.04
SMG1-212ENST00000566328 RASA4O43374 803 aa2.31□□□□□ -2.04
SMG1-212ENST00000566328 RFPL2O75678 378 aa2.31□□□□□ -2.04
SMG1-212ENST00000566328 TFPIP10646 304 aa2.31□□□□□ -2.04
SMG1-212ENST00000566328 CHN1P15882 459 aa2.31□□□□□ -2.04
SMG1-212ENST00000566328 CTPS1P17812 591 aa2.31□□□□□ -2.04
SMG1-212ENST00000566328 CENPAP49450 140 aa2.31□□□□□ -2.04
SMG1-212ENST00000566328 PITX1P78337 314 aaPredicted RBP2.31□□□□□ -2.04
SMG1-212ENST00000566328 AMZ1Q400G9 498 aa2.31□□□□□ -2.04
SMG1-212ENST00000566328 RUNDC3AQ59EK9 446 aa2.31□□□□□ -2.04
SMG1-212ENST00000566328 DGAT2L7PQ6IED9 249 aa2.31□□□□□ -2.04
SMG1-212ENST00000566328 CCNI2Q6ZMN8 369 aaPredicted RBP2.31□□□□□ -2.04
SMG1-212ENST00000566328 KRBA2Q6ZNG9 492 aa2.31□□□□□ -2.04
SMG1-212ENST00000566328 ZNF497Q6ZNH5 498 aa2.31□□□□□ -2.04
SMG1-212ENST00000566328 DSG4Q86SJ6 1040 aa2.31□□□□□ -2.04
SMG1-212ENST00000566328 SFTPA2Q8IWL1 248 aa2.31□□□□□ -2.04
SMG1-212ENST00000566328 TSR2Q969E8 191 aaKnown RBP2.31□□□□□ -2.04
SMG1-212ENST00000566328 C18orf8Q96DM3 657 aa2.31□□□□□ -2.04
SMG1-212ENST00000566328 RIPOR3Q96MK2 946 aa2.31□□□□□ -2.04
SMG1-212ENST00000566328 CSF3RQ99062 836 aa2.31□□□□□ -2.04
SMG1-212ENST00000566328 RTKNQ9BST9 563 aa2.31□□□□□ -2.04
SMG1-212ENST00000566328 SARGQ9BW04 601 aa2.31□□□□□ -2.04
SMG1-212ENST00000566328 ELAC1Q9H777 363 aaKnown RBP2.31□□□□□ -2.04
SMG1-212ENST00000566328 LRRC4Q9HBW1 653 aa2.31□□□□□ -2.04
SMG1-212ENST00000566328 TMEM160Q9NX00 188 aa2.31□□□□□ -2.04
SMG1-212ENST00000566328 CLDN16Q9Y5I7 305 aa2.31□□□□□ -2.04
SMG1-212ENST00000566328 MID1O15344 667 aa2.3□□□□□ -2.04
SMG1-212ENST00000566328 SEPT4O43236 478 aa2.3□□□□□ -2.04
SMG1-212ENST00000566328 PCDH7O60245 1069 aa2.3□□□□□ -2.04
SMG1-212ENST00000566328 HBP1O60381 514 aa2.3□□□□□ -2.04
SMG1-212ENST00000566328 ITGA2BP08514 1039 aa2.3□□□□□ -2.04
SMG1-212ENST00000566328 LYL1P12980 280 aa2.3□□□□□ -2.04
SMG1-212ENST00000566328 AVPR2P30518 371 aa2.3□□□□□ -2.04
SMG1-212ENST00000566328 STX2P32856 288 aa2.3□□□□□ -2.04
SMG1-212ENST00000566328 GJC1P36383 396 aa2.3□□□□□ -2.04
SMG1-212ENST00000566328 HDAC4P56524 1084 aa2.3□□□□□ -2.04
SMG1-212ENST00000566328 GALNTL6Q49A17 601 aa2.3□□□□□ -2.04
SMG1-212ENST00000566328 CCNYL2Q5T2Q4 361 aa2.3□□□□□ -2.04
SMG1-212ENST00000566328 SATL1Q86VE3 508 aa2.3□□□□□ -2.04
SMG1-212ENST00000566328 MON1AQ86VX9 555 aa2.3□□□□□ -2.04
SMG1-212ENST00000566328 WDR75Q8IWA0 830 aaKnown RBP2.3□□□□□ -2.04
SMG1-212ENST00000566328 FSIP1Q8NA03 581 aa2.3□□□□□ -2.04
SMG1-212ENST00000566328 DEPTORQ8TB45 409 aa2.3□□□□□ -2.04
SMG1-212ENST00000566328 MAGEC3Q8TD91 643 aa2.3□□□□□ -2.04
SMG1-212ENST00000566328 NCSTNQ92542 709 aa2.3□□□□□ -2.04
SMG1-212ENST00000566328 KIAA1191Q96A73 305 aa2.3□□□□□ -2.04
SMG1-212ENST00000566328 C17orf77Q96MU5 243 aa2.3□□□□□ -2.04
SMG1-212ENST00000566328 ZNF599Q96NL3 588 aa2.3□□□□□ -2.04
SMG1-212ENST00000566328 NAA15Q9BXJ9 866 aaKnown RBP2.3□□□□□ -2.04
SMG1-212ENST00000566328 CXorf56Q9H5V9 222 aa2.3□□□□□ -2.04
SMG1-212ENST00000566328 FKRPQ9H9S5 495 aa2.3□□□□□ -2.04
SMG1-212ENST00000566328 SEPSECSQ9HD40 501 aaKnown RBP2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms