RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 CA4P22748 312 aa18.94■□□□□ 0.62
COMMD4-213ENST00000565834 PHBP35232 272 aa18.94■□□□□ 0.62
COMMD4-213ENST00000565834 CHRNA4P43681 627 aa18.94■□□□□ 0.62
COMMD4-213ENST00000565834 VASPP50552 380 aaPredicted RBP18.94■□□□□ 0.62
COMMD4-213ENST00000565834 FAM193AP78312 1265 aa18.94■□□□□ 0.62
COMMD4-213ENST00000565834 SLC1A5Q15758 541 aa18.94■□□□□ 0.62
COMMD4-213ENST00000565834 CERCAMQ5T4B2 595 aa18.94■□□□□ 0.62
COMMD4-213ENST00000565834 RYBPQ8N488 228 aaPredicted RBP18.94■□□□□ 0.62
COMMD4-213ENST00000565834 CHFRQ96EP1 664 aa18.94■□□□□ 0.62
COMMD4-213ENST00000565834 NAT9Q9BTE0 207 aa18.94■□□□□ 0.62
COMMD4-213ENST00000565834 TDRD1Q9BXT4 1180 aaKnown RBP18.94■□□□□ 0.62
COMMD4-213ENST00000565834 KCNK12Q9HB15 430 aa18.94■□□□□ 0.62
COMMD4-213ENST00000565834 EVLQ9UI08 416 aaPredicted RBP18.94■□□□□ 0.62
COMMD4-213ENST00000565834 ARIH1Q9Y4X5 557 aaPredicted RBP18.94■□□□□ 0.62
COMMD4-213ENST00000565834 RAI2Q9Y5P3 530 aa18.94■□□□□ 0.62
COMMD4-213ENST00000565834 MYO10Q9HD67 2058 aa18.94■□□□□ 0.62
COMMD4-213ENST00000565834 PRUNE2Q8WUY3 3088 aa18.93■□□□□ 0.62
COMMD4-213ENST00000565834 TBC1D3BA6NDS4 549 aa18.93■□□□□ 0.62
COMMD4-213ENST00000565834 NDST3O95803 873 aa18.93■□□□□ 0.62
COMMD4-213ENST00000565834 HLA-DPA1P20036 260 aa18.93■□□□□ 0.62
COMMD4-213ENST00000565834 SSTR1P30872 391 aa18.93■□□□□ 0.62
COMMD4-213ENST00000565834 GPX6P59796 221 aa18.93■□□□□ 0.62
COMMD4-213ENST00000565834 ST8SIA6P61647 398 aa18.93■□□□□ 0.62
COMMD4-213ENST00000565834 IFFO1Q0D2I5 559 aa18.93■□□□□ 0.62
COMMD4-213ENST00000565834 PTPRNQ16849 979 aa18.93■□□□□ 0.62
COMMD4-213ENST00000565834 SIRPB2Q5JXA9 342 aa18.93■□□□□ 0.62
COMMD4-213ENST00000565834 PTCRAQ6ISU1 281 aaPredicted RBP18.93■□□□□ 0.62
COMMD4-213ENST00000565834 LRIG3Q6UXM1 1119 aa18.93■□□□□ 0.62
COMMD4-213ENST00000565834 CCNJLQ8IV13 435 aa18.93■□□□□ 0.62
COMMD4-213ENST00000565834 OR6K2Q8NGY2 324 aa18.93■□□□□ 0.62
COMMD4-213ENST00000565834 PLA2G4CQ9UP65 541 aa18.93■□□□□ 0.62
COMMD4-213ENST00000565834 PCDHGC4Q9Y5F7 938 aa18.93■□□□□ 0.62
COMMD4-213ENST00000565834 A0A087WUV0 522 aaPredicted RBP18.92■□□□□ 0.62
COMMD4-213ENST00000565834 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.92■□□□□ 0.62
COMMD4-213ENST00000565834 BNIP3LO60238 219 aa18.92■□□□□ 0.62
COMMD4-213ENST00000565834 SPAG6O75602 509 aa18.92■□□□□ 0.62
COMMD4-213ENST00000565834 KAT7O95251 611 aa18.92■□□□□ 0.62
COMMD4-213ENST00000565834 FGF1P05230 155 aa18.92■□□□□ 0.62
COMMD4-213ENST00000565834 ATXN1LP0C7T5 689 aaKnown RBP18.92■□□□□ 0.62
COMMD4-213ENST00000565834 PGAM1P18669 254 aa18.92■□□□□ 0.62
COMMD4-213ENST00000565834 TRAF2Q12933 501 aa18.92■□□□□ 0.62
COMMD4-213ENST00000565834 CARD16Q5EG05 197 aa18.92■□□□□ 0.62
COMMD4-213ENST00000565834 C3orf62Q6ZUJ4 267 aa18.92■□□□□ 0.62
COMMD4-213ENST00000565834 NUDT18Q6ZVK8 323 aa18.92■□□□□ 0.62
COMMD4-213ENST00000565834 Q6ZVU0 165 aa18.92■□□□□ 0.62
COMMD4-213ENST00000565834 OR2W6PQ8NHA6 318 aa18.92■□□□□ 0.62
COMMD4-213ENST00000565834 UCMAQ8WVF2 138 aa18.92■□□□□ 0.62
COMMD4-213ENST00000565834 TRIB3Q96RU7 358 aa18.92■□□□□ 0.62
COMMD4-213ENST00000565834 HECAQ9UBI9 543 aaPredicted RBP18.92■□□□□ 0.62
COMMD4-213ENST00000565834 FAM50BQ9Y247 325 aa18.92■□□□□ 0.62
COMMD4-213ENST00000565834 CHKBQ9Y259 395 aa18.92■□□□□ 0.62
COMMD4-213ENST00000565834 COL4A2P08572 1712 aa18.92■□□□□ 0.62
COMMD4-213ENST00000565834 MUC22E2RYF6 1773 aaPredicted RBP18.92■□□□□ 0.62
COMMD4-213ENST00000565834 TTC34A8MYJ7 566 aa18.92■□□□□ 0.62
COMMD4-213ENST00000565834 APODP05090 189 aa18.92■□□□□ 0.62
COMMD4-213ENST00000565834 GSTA2P09210 222 aa18.92■□□□□ 0.62
COMMD4-213ENST00000565834 GRIA2P42262 883 aa18.92■□□□□ 0.62
COMMD4-213ENST00000565834 RECQLP46063 649 aaPredicted RBP18.92■□□□□ 0.62
COMMD4-213ENST00000565834 SOX9P48436 509 aa18.92■□□□□ 0.62
COMMD4-213ENST00000565834 EIF3BP55884 814 aaKnown RBP18.92■□□□□ 0.62
COMMD4-213ENST00000565834 GALNT3Q14435 633 aa18.92■□□□□ 0.62
COMMD4-213ENST00000565834 MTERF4Q7Z6M4 381 aaKnown RBP18.92■□□□□ 0.62
COMMD4-213ENST00000565834 SLC44A3Q8N4M1 653 aa18.92■□□□□ 0.62
COMMD4-213ENST00000565834 MYO19Q96H55 970 aa18.92■□□□□ 0.62
COMMD4-213ENST00000565834 ATP13A3Q9H7F0 1226 aa18.92■□□□□ 0.62
COMMD4-213ENST00000565834 TRPV5Q9NQA5 729 aa18.92■□□□□ 0.62
COMMD4-213ENST00000565834 NFS1Q9Y697 457 aa18.92■□□□□ 0.62
COMMD4-213ENST00000565834 MAGEB16A2A368 324 aa18.91■□□□□ 0.62
COMMD4-213ENST00000565834 SHBGP04278 402 aa18.91■□□□□ 0.62
COMMD4-213ENST00000565834 CCNHP51946 323 aaPredicted RBP18.91■□□□□ 0.62
COMMD4-213ENST00000565834 RAD51Q06609 339 aa18.91■□□□□ 0.62
COMMD4-213ENST00000565834 BCL2L1Q07817 233 aa18.91■□□□□ 0.62
COMMD4-213ENST00000565834 POU6F1Q14863 301 aa18.91■□□□□ 0.62
COMMD4-213ENST00000565834 MYLK3Q32MK0 819 aa18.91■□□□□ 0.62
COMMD4-213ENST00000565834 PUS10Q3MIT2 529 aaKnown RBP18.91■□□□□ 0.62
COMMD4-213ENST00000565834 FNDC3BQ53EP0 1204 aaKnown RBP18.91■□□□□ 0.62
COMMD4-213ENST00000565834 UNC5AQ6ZN44 842 aa18.91■□□□□ 0.62
COMMD4-213ENST00000565834 PLPP6Q8IY26 295 aa18.91■□□□□ 0.62
COMMD4-213ENST00000565834 PPHLN1Q8NEY8 458 aaKnown RBP18.91■□□□□ 0.62
COMMD4-213ENST00000565834 FRS2Q8WU20 508 aa18.91■□□□□ 0.62
COMMD4-213ENST00000565834 PDCD6IPQ8WUM4 868 aaKnown RBP18.91■□□□□ 0.62
COMMD4-213ENST00000565834 ZBTB9Q96C00 473 aa18.91■□□□□ 0.62
COMMD4-213ENST00000565834 ADGRE3Q9BY15 652 aa18.91■□□□□ 0.62
COMMD4-213ENST00000565834 UNC80Q8N2C7 3258 aa18.9■□□□□ 0.62
COMMD4-213ENST00000565834 SOCS5O75159 536 aa18.9■□□□□ 0.62
COMMD4-213ENST00000565834 POP4O95707 220 aaKnown RBP18.9■□□□□ 0.62
COMMD4-213ENST00000565834 SERPINA4P29622 427 aa18.9■□□□□ 0.62
COMMD4-213ENST00000565834 PCID2Q5JVF3 399 aa18.9■□□□□ 0.62
COMMD4-213ENST00000565834 STEAP4Q687X5 459 aa18.9■□□□□ 0.62
COMMD4-213ENST00000565834 DPY19L3Q6ZPD9 716 aa18.9■□□□□ 0.62
COMMD4-213ENST00000565834 CAMK1DQ8IU85 385 aa18.9■□□□□ 0.62
COMMD4-213ENST00000565834 SFTPA1Q8IWL2 248 aa18.9■□□□□ 0.62
COMMD4-213ENST00000565834 SUGP1Q8IWZ8 645 aaKnown RBP18.9■□□□□ 0.62
COMMD4-213ENST00000565834 KDM1BQ8NB78 822 aa18.9■□□□□ 0.62
COMMD4-213ENST00000565834 GSDMBQ8TAX9 411 aa18.9■□□□□ 0.62
COMMD4-213ENST00000565834 RMDN1Q96DB5 314 aa18.9■□□□□ 0.62
COMMD4-213ENST00000565834 TUBGCP5Q96RT8 1024 aa18.9■□□□□ 0.62
COMMD4-213ENST00000565834 CCDC77Q9BR77 488 aa18.9■□□□□ 0.62
COMMD4-213ENST00000565834 TRIM56Q9BRZ2 755 aaKnown RBP18.9■□□□□ 0.62
COMMD4-213ENST00000565834 SOX13Q9UN79 622 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms