RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 A8MX80 341 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 AREL1O15033 823 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 MUSKO15146 869 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 YY2O15391 372 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 SPINT1O43278 529 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 ATMINO43313 823 aaPredicted RBP6.48□□□□□ -1.37
TCF4-228ENST00000565393 BUB1BO60566 1050 aaPredicted RBP6.48□□□□□ -1.37
TCF4-228ENST00000565393 USP12O75317 370 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 PIGNO95427 931 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 PRKCGP05129 697 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 ANXA6P08133 673 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 GIMD1P0DJR0 217 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 GZMAP12544 262 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 HOXB3P14651 431 aaPredicted RBP6.48□□□□□ -1.37
TCF4-228ENST00000565393 NME1P15531 152 aaKnown RBP6.48□□□□□ -1.37
TCF4-228ENST00000565393 ERCC2P18074 760 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 ITPKBP27987 946 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 HTR1BP28222 390 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 HTR7P34969 479 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 ACTN2P35609 894 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 EIF2S3P41091 472 aaKnown RBP6.48□□□□□ -1.37
TCF4-228ENST00000565393 SSR1P43307 286 aaKnown RBP6.48□□□□□ -1.37
TCF4-228ENST00000565393 ABCG1P45844 678 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 SCNN1BP51168 640 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 SUOXP51687 545 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 PFN3P60673 137 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 YPEL5P62699 121 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 POLR2LP62875 67 aaKnown RBP6.48□□□□□ -1.37
TCF4-228ENST00000565393 PPARDQ03181 441 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 BCL2L1Q07817 233 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 ELP6Q0PNE2 266 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 EIF2B5Q13144 721 aaKnown RBP6.48□□□□□ -1.37
TCF4-228ENST00000565393 COL9A2Q14055 689 aaPredicted RBP6.48□□□□□ -1.37
TCF4-228ENST00000565393 GRM3Q14832 879 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 NR1I3Q14994 352 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 RTP5Q14D33 572 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 CA9Q16790 459 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 UGP2Q16851 508 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 TMEM52BQ4KMG9 183 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 PRRT3Q5FWE3 981 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 PLEKHA7Q6IQ23 1121 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 ESRP1Q6NXG1 681 aaKnown RBP6.48□□□□□ -1.37
TCF4-228ENST00000565393 ZCCHC8Q6NZY4 707 aaKnown RBP6.48□□□□□ -1.37
TCF4-228ENST00000565393 RFX8Q6ZV50 586 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 APTXQ7Z2E3 356 aaKnown RBP6.48□□□□□ -1.37
TCF4-228ENST00000565393 ZNF571Q7Z3V5 609 aaPredicted RBP6.48□□□□□ -1.37
TCF4-228ENST00000565393 SRLQ86TD4 932 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 CAMK1DQ8IU85 385 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 HID1Q8IV36 788 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 PHACTR4Q8IZ21 702 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 CACTIN-AS1Q8N1I8 211 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 IFI44Q8TCB0 444 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 HCAR2Q8TDS4 363 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 SCG3Q8WXD2 468 aaKnown RBP6.48□□□□□ -1.37
TCF4-228ENST00000565393 BAP1Q92560 729 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 HSPH1Q92598 858 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 FGF11Q92914 225 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 TSACCQ96A04 125 aaPredicted RBP6.48□□□□□ -1.37
TCF4-228ENST00000565393 ZNF653Q96CK0 615 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 ZNF641Q96N77 438 aaPredicted RBP6.48□□□□□ -1.37
TCF4-228ENST00000565393 BPIFA3Q9BQP9 254 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 SNRNP25Q9BV90 132 aaKnown RBP6.48□□□□□ -1.37
TCF4-228ENST00000565393 CINPQ9BW66 212 aaPredicted RBP6.48□□□□□ -1.37
TCF4-228ENST00000565393 ZWILCHQ9H900 591 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 SP110Q9HB58 689 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 USP29Q9HBJ7 922 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 MRPL47Q9HD33 250 aaKnown RBP6.48□□□□□ -1.37
TCF4-228ENST00000565393 WDR70Q9NW82 654 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 NCKIPSDQ9NZQ3 722 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 DKK3Q9UBP4 350 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 LHX3Q9UBR4 397 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 APOBEC3BQ9UH17 382 aaKnown RBP6.48□□□□□ -1.37
TCF4-228ENST00000565393 SALL4Q9UJQ4 1053 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 NEU3Q9UQ49 428 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 COQ6Q9Y2Z9 468 aa6.48□□□□□ -1.37
TCF4-228ENST00000565393 DCHS1Q96JQ0 3298 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 PLXND1Q9Y4D7 1925 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 A0A087WV48 116 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 A0A1W2PQC6 194 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 TTC24A2A3L6 582 aaPredicted RBP6.47□□□□□ -1.37
TCF4-228ENST00000565393 EIF3CLB5ME19 914 aaKnown RBP6.47□□□□□ -1.37
TCF4-228ENST00000565393 GOLGA6L19H0YKK7 550 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 DDX3XO00571 662 aaKnown RBP eCLIP6.47□□□□□ -1.37
TCF4-228ENST00000565393 TOR1BO14657 336 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 RIOK3O14730 519 aaKnown RBP6.47□□□□□ -1.37
TCF4-228ENST00000565393 TPP1O14773 563 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 PRAMEF11O60813 436 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 CSO75390 466 aaKnown RBP6.47□□□□□ -1.37
TCF4-228ENST00000565393 GCATO75600 419 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 TNFP01375 233 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 MPOP05164 745 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 PCCBP05166 539 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 MYBL1P10243 752 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 TSHRP16473 764 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 AMPD1P23109 780 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 SERPINA4P29622 427 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 MIPP30301 263 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 IGFALSP35858 605 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 ARL4AP40617 200 aa6.47□□□□□ -1.37
TCF4-228ENST00000565393 HCAR3P49019 387 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms