RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 SETD3Q86TU7 594 aaPredicted RBP9.89□□□□□ -0.83
UBFD1-203ENST00000564106 DENND1CQ8IV53 801 aa9.89□□□□□ -0.83
UBFD1-203ENST00000564106 CCDC117Q8IWD4 279 aaPredicted RBP9.89□□□□□ -0.83
UBFD1-203ENST00000564106 LGI2Q8N0V4 545 aa9.89□□□□□ -0.83
UBFD1-203ENST00000564106 SYNPOQ8N3V7 929 aa9.89□□□□□ -0.83
UBFD1-203ENST00000564106 CCDC33Q8N5R6 958 aa9.89□□□□□ -0.83
UBFD1-203ENST00000564106 ZNF557Q8N988 423 aaPredicted RBP9.89□□□□□ -0.83
UBFD1-203ENST00000564106 HJURPQ8NCD3 748 aaPredicted RBP9.89□□□□□ -0.83
UBFD1-203ENST00000564106 GAB3Q8WWW8 586 aa9.89□□□□□ -0.83
UBFD1-203ENST00000564106 MAML1Q92585 1016 aa9.89□□□□□ -0.83
UBFD1-203ENST00000564106 ATP2A3Q93084 1043 aa9.89□□□□□ -0.83
UBFD1-203ENST00000564106 C9orf72Q96LT7 481 aa9.89□□□□□ -0.83
UBFD1-203ENST00000564106 IL12RB2Q99665 862 aa9.89□□□□□ -0.83
UBFD1-203ENST00000564106 DUSP15Q9H1R2 295 aaPredicted RBP9.89□□□□□ -0.83
UBFD1-203ENST00000564106 ARRDC1-AS1Q9H2J1 176 aa9.89□□□□□ -0.83
UBFD1-203ENST00000564106 CENPHQ9H3R5 247 aa9.89□□□□□ -0.83
UBFD1-203ENST00000564106 LRRC40Q9H9A6 602 aa9.89□□□□□ -0.83
UBFD1-203ENST00000564106 IPO11Q9UI26 975 aaKnown RBP9.89□□□□□ -0.83
UBFD1-203ENST00000564106 SLC24A2Q9UI40 661 aa9.89□□□□□ -0.83
UBFD1-203ENST00000564106 SH3BP1Q9Y3L3 701 aa9.89□□□□□ -0.83
UBFD1-203ENST00000564106 TEX264Q9Y6I9 313 aa9.89□□□□□ -0.83
UBFD1-203ENST00000564106 USP24Q9UPU5 2620 aa9.88□□□□□ -0.83
UBFD1-203ENST00000564106 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.88□□□□□ -0.83
UBFD1-203ENST00000564106 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.88□□□□□ -0.83
UBFD1-203ENST00000564106 EXOC1LA0A1B0GW35 172 aa9.88□□□□□ -0.83
UBFD1-203ENST00000564106 ILVBLA1L0T0 632 aa9.88□□□□□ -0.83
UBFD1-203ENST00000564106 RPP40O75818 363 aaKnown RBP9.88□□□□□ -0.83
UBFD1-203ENST00000564106 CPP00450 1065 aa9.88□□□□□ -0.83
UBFD1-203ENST00000564106 JCHAINP01591 159 aa9.88□□□□□ -0.83
UBFD1-203ENST00000564106 DRD1P21728 446 aa9.88□□□□□ -0.83
UBFD1-203ENST00000564106 PAPOLAP51003 745 aaKnown RBP9.88□□□□□ -0.83
UBFD1-203ENST00000564106 NRLP54845 237 aa9.88□□□□□ -0.83
UBFD1-203ENST00000564106 GEMP55040 296 aa9.88□□□□□ -0.83
UBFD1-203ENST00000564106 OXCT1P55809 520 aa9.88□□□□□ -0.83
UBFD1-203ENST00000564106 ZNF177Q13360 481 aaPredicted RBP9.88□□□□□ -0.83
UBFD1-203ENST00000564106 PUM1Q14671 1186 aaKnown RBP eCLIP9.88□□□□□ -0.83
UBFD1-203ENST00000564106 RFTN1Q14699 578 aaPredicted RBP9.88□□□□□ -0.83
UBFD1-203ENST00000564106 KCTD19Q17RG1 926 aaPredicted RBP9.88□□□□□ -0.83
UBFD1-203ENST00000564106 PLK5Q496M5 336 aa9.88□□□□□ -0.83
UBFD1-203ENST00000564106 LY6G5CQ5SRR4 150 aa9.88□□□□□ -0.83
UBFD1-203ENST00000564106 FNBP1LQ5T0N5 605 aa9.88□□□□□ -0.83
UBFD1-203ENST00000564106 FAXCQ5TGI0 409 aa9.88□□□□□ -0.83
UBFD1-203ENST00000564106 MARC1Q5VT66 337 aa9.88□□□□□ -0.83
UBFD1-203ENST00000564106 NADSYN1Q6IA69 706 aa9.88□□□□□ -0.83
UBFD1-203ENST00000564106 ZNF354CQ86Y25 554 aa9.88□□□□□ -0.83
UBFD1-203ENST00000564106 TMEM25Q86YD3 366 aa9.88□□□□□ -0.83
UBFD1-203ENST00000564106 TDRPQ86YL5 185 aa9.88□□□□□ -0.83
UBFD1-203ENST00000564106 ETFBKMTQ8IXQ9 262 aa9.88□□□□□ -0.83
UBFD1-203ENST00000564106 CPXM2Q8N436 756 aa9.88□□□□□ -0.83
UBFD1-203ENST00000564106 TAB3Q8N5C8 712 aaPredicted RBP9.88□□□□□ -0.83
UBFD1-203ENST00000564106 PDCD7Q8N8D1 485 aaKnown RBP9.88□□□□□ -0.83
UBFD1-203ENST00000564106 NAT16Q8N8M0 369 aa9.88□□□□□ -0.83
UBFD1-203ENST00000564106 FBXO36Q8NEA4 188 aa9.88□□□□□ -0.83
UBFD1-203ENST00000564106 MDGA1Q8NFP4 955 aa9.88□□□□□ -0.83
UBFD1-203ENST00000564106 OR2W6PQ8NHA6 318 aa9.88□□□□□ -0.83
UBFD1-203ENST00000564106 IGSF8Q969P0 613 aa9.88□□□□□ -0.83
UBFD1-203ENST00000564106 AGAP3Q96P47 875 aa9.88□□□□□ -0.83
UBFD1-203ENST00000564106 FCRL5Q96RD9 977 aa9.88□□□□□ -0.83
UBFD1-203ENST00000564106 CYTH2Q99418 400 aa9.88□□□□□ -0.83
UBFD1-203ENST00000564106 LRRC4CQ9HCJ2 640 aa9.88□□□□□ -0.83
UBFD1-203ENST00000564106 CD93Q9NPY3 652 aa9.88□□□□□ -0.83
UBFD1-203ENST00000564106 VPS45Q9NRW7 570 aa9.88□□□□□ -0.83
UBFD1-203ENST00000564106 DNAJC17Q9NVM6 304 aaKnown RBP9.88□□□□□ -0.83
UBFD1-203ENST00000564106 SENP1Q9P0U3 644 aa9.88□□□□□ -0.83
UBFD1-203ENST00000564106 SAMD15Q9P1V8 674 aa9.88□□□□□ -0.83
UBFD1-203ENST00000564106 ZNF212Q9UDV6 495 aa9.88□□□□□ -0.83
UBFD1-203ENST00000564106 GMEB2Q9UKD1 530 aa9.88□□□□□ -0.83
UBFD1-203ENST00000564106 AGO1Q9UL18 857 aaKnown RBP9.88□□□□□ -0.83
UBFD1-203ENST00000564106 FRYQ5TBA9 3013 aa9.88□□□□□ -0.83
UBFD1-203ENST00000564106 CEP295Q9C0D2 2601 aa9.88□□□□□ -0.83
UBFD1-203ENST00000564106 GON4LQ3T8J9 2241 aa9.88□□□□□ -0.83
UBFD1-203ENST00000564106 PLXND1Q9Y4D7 1925 aa9.88□□□□□ -0.83
UBFD1-203ENST00000564106 TCRBV7S3A2A0A539 114 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 MAGEB16A2A368 324 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 SDR42E2A6NKP2 422 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 PATE3B3GLJ2 98 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 POLR3GO15318 223 aaPredicted RBP9.87□□□□□ -0.83
UBFD1-203ENST00000564106 ZBTB24O43167 697 aaPredicted RBP9.87□□□□□ -0.83
UBFD1-203ENST00000564106 CACNG3O60359 315 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 CNTN5O94779 1100 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 EPN2O95208 641 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 SHBGP04278 402 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 RHOCP08134 193 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 NFKB1P19838 968 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 ELK3P41970 407 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 KIR2DL1P43626 348 aaPredicted RBP9.87□□□□□ -0.83
UBFD1-203ENST00000564106 MMP13P45452 471 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 CBX1P83916 185 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 GNA12Q03113 381 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 GABPB1Q06547 395 aaPredicted RBP9.87□□□□□ -0.83
UBFD1-203ENST00000564106 CDH17Q12864 832 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 ZBTB17Q13105 803 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 MPP3Q13368 585 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 SERINC3Q13530 473 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 CSRP2Q16527 193 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 ALFQ53S48 1182 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 TTMPQ5BVD1 217 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 PLA2G2CQ5R387 149 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 MPP7Q5T2T1 576 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 ARTNQ5T4W7 220 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms