RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 VPS36Q86VN1 386 aa18.92■□□□□ 0.62
NME3-204ENST00000563498 FAM114A1Q8IWE2 563 aa18.92■□□□□ 0.62
NME3-204ENST00000563498 FSTL5Q8N475 847 aaPredicted RBP18.92■□□□□ 0.62
NME3-204ENST00000563498 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.92■□□□□ 0.62
NME3-204ENST00000563498 CLPBQ9H078 707 aa18.92■□□□□ 0.62
NME3-204ENST00000563498 DNAI1Q9UI46 699 aa18.92■□□□□ 0.62
NME3-204ENST00000563498 NEU3Q9UQ49 428 aa18.92■□□□□ 0.62
NME3-204ENST00000563498 PCDHGA7Q9Y5G6 932 aa18.92■□□□□ 0.62
NME3-204ENST00000563498 RP1P56715 2156 aa18.92■□□□□ 0.62
NME3-204ENST00000563498 MYO18BQ8IUG5 2567 aa18.91■□□□□ 0.62
NME3-204ENST00000563498 ZSCAN5CA6NGD5 496 aaPredicted RBP18.91■□□□□ 0.62
NME3-204ENST00000563498 RAMP2O60895 175 aa18.91■□□□□ 0.62
NME3-204ENST00000563498 PEX5P50542 639 aa18.91■□□□□ 0.62
NME3-204ENST00000563498 RAD51Q06609 339 aa18.91■□□□□ 0.62
NME3-204ENST00000563498 C1QBPQ07021 282 aaKnown RBP18.91■□□□□ 0.62
NME3-204ENST00000563498 ELOCQ15369 112 aa18.91■□□□□ 0.62
NME3-204ENST00000563498 MIIPQ5JXC2 388 aa18.91■□□□□ 0.62
NME3-204ENST00000563498 KLHDC7AQ5VTJ3 777 aa18.91■□□□□ 0.62
NME3-204ENST00000563498 KIAA1614Q5VZ46 1190 aa18.91■□□□□ 0.62
NME3-204ENST00000563498 RWDD4Q6NW29 188 aaKnown RBP18.91■□□□□ 0.62
NME3-204ENST00000563498 NOP9Q86U38 636 aaKnown RBP18.91■□□□□ 0.62
NME3-204ENST00000563498 SDR16C5Q8N3Y7 309 aa18.91■□□□□ 0.62
NME3-204ENST00000563498 EMC1Q8N766 993 aa18.91■□□□□ 0.62
NME3-204ENST00000563498 ARL10Q8N8L6 244 aa18.91■□□□□ 0.62
NME3-204ENST00000563498 TP53I13Q8NBR0 393 aaPredicted RBP18.91■□□□□ 0.62
NME3-204ENST00000563498 CXorf40AQ8TE69 158 aa18.91■□□□□ 0.62
NME3-204ENST00000563498 SCG3Q8WXD2 468 aaKnown RBP18.91■□□□□ 0.62
NME3-204ENST00000563498 CASKIN2Q8WXE0 1202 aa18.91■□□□□ 0.62
NME3-204ENST00000563498 CPA5Q8WXQ8 436 aa18.91■□□□□ 0.62
NME3-204ENST00000563498 GDAP1L1Q96MZ0 367 aa18.91■□□□□ 0.62
NME3-204ENST00000563498 CCNL2Q96S94 520 aaPredicted RBP18.91■□□□□ 0.62
NME3-204ENST00000563498 EPAS1Q99814 870 aa18.91■□□□□ 0.62
NME3-204ENST00000563498 NAA15Q9BXJ9 866 aaKnown RBP18.91■□□□□ 0.62
NME3-204ENST00000563498 DKK3Q9UBP4 350 aa18.91■□□□□ 0.62
NME3-204ENST00000563498 ATXN7L1Q9ULK2 861 aaPredicted RBP18.91■□□□□ 0.62
NME3-204ENST00000563498 MFHAS1Q9Y4C4 1052 aa18.91■□□□□ 0.62
NME3-204ENST00000563498 FHOD1Q9Y613 1164 aa18.91■□□□□ 0.62
NME3-204ENST00000563498 TMEM110-MUSTN1A8MSY1 372 aa18.9■□□□□ 0.62
NME3-204ENST00000563498 TMX2-CTNND1H3BSU7 103 aa18.9■□□□□ 0.62
NME3-204ENST00000563498 KDELR3O43731 214 aa18.9■□□□□ 0.62
NME3-204ENST00000563498 MMP20O60882 483 aa18.9■□□□□ 0.62
NME3-204ENST00000563498 ALPIP09923 528 aa18.9■□□□□ 0.62
NME3-204ENST00000563498 SUOXP51687 545 aa18.9■□□□□ 0.62
NME3-204ENST00000563498 TPD52L1Q16890 204 aaPredicted RBP18.9■□□□□ 0.62
NME3-204ENST00000563498 NAA35Q5VZE5 725 aa18.9■□□□□ 0.62
NME3-204ENST00000563498 EPS8L1Q8TE68 723 aa18.9■□□□□ 0.62
NME3-204ENST00000563498 TBC1D31Q96DN5 1066 aa18.9■□□□□ 0.62
NME3-204ENST00000563498 TTYH3Q9C0H2 523 aa18.9■□□□□ 0.62
NME3-204ENST00000563498 CLMPQ9H6B4 373 aa18.9■□□□□ 0.62
NME3-204ENST00000563498 MBNL1Q9NR56 388 aaKnown RBP18.9■□□□□ 0.62
NME3-204ENST00000563498 METTL5Q9NRN9 209 aaKnown RBP18.9■□□□□ 0.62
NME3-204ENST00000563498 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.9■□□□□ 0.62
NME3-204ENST00000563498 ACSL6Q9UKU0 697 aa18.9■□□□□ 0.62
NME3-204ENST00000563498 FAM72CH0Y354 149 aa18.89■□□□□ 0.61
NME3-204ENST00000563498 PLD2O14939 933 aa18.89■□□□□ 0.61
NME3-204ENST00000563498 CASC3O15234 703 aaKnown RBP18.89■□□□□ 0.61
NME3-204ENST00000563498 LRIG2O94898 1065 aa18.89■□□□□ 0.61
NME3-204ENST00000563498 MMEP08473 750 aa18.89■□□□□ 0.61
NME3-204ENST00000563498 UCHL3P15374 230 aa18.89■□□□□ 0.61
NME3-204ENST00000563498 SDC4P31431 198 aa18.89■□□□□ 0.61
NME3-204ENST00000563498 PTPN9P43378 593 aa18.89■□□□□ 0.61
NME3-204ENST00000563498 HK3P52790 923 aa18.89■□□□□ 0.61
NME3-204ENST00000563498 CAMK4Q16566 473 aa18.89■□□□□ 0.61
NME3-204ENST00000563498 KLHL40Q2TBA0 621 aa18.89■□□□□ 0.61
NME3-204ENST00000563498 CCDC14Q49A88 953 aa18.89■□□□□ 0.61
NME3-204ENST00000563498 RAB6CQ53S08 254 aa18.89■□□□□ 0.61
NME3-204ENST00000563498 INO80DQ53TQ3 878 aaPredicted RBP18.89■□□□□ 0.61
NME3-204ENST00000563498 ATXN7L2Q5T6C5 722 aaPredicted RBP18.89■□□□□ 0.61
NME3-204ENST00000563498 FAM72AQ5TYM5 149 aa18.89■□□□□ 0.61
NME3-204ENST00000563498 FAM72DQ6L9T8 149 aa18.89■□□□□ 0.61
NME3-204ENST00000563498 STRADAQ7RTN6 431 aa18.89■□□□□ 0.61
NME3-204ENST00000563498 FAM72BQ86X60 149 aa18.89■□□□□ 0.61
NME3-204ENST00000563498 ZNF677Q86XU0 584 aa18.89■□□□□ 0.61
NME3-204ENST00000563498 TUBGCP2Q9BSJ2 902 aa18.89■□□□□ 0.61
NME3-204ENST00000563498 RAB6CQ9H0N0 254 aa18.89■□□□□ 0.61
NME3-204ENST00000563498 DOLKQ9UPQ8 538 aa18.89■□□□□ 0.61
NME3-204ENST00000563498 KIF26BQ2KJY2 2108 aa18.88■□□□□ 0.61
NME3-204ENST00000563498 FAM170AA1A519 330 aa18.88■□□□□ 0.61
NME3-204ENST00000563498 C2CD4BA6NLJ0 364 aa18.88■□□□□ 0.61
NME3-204ENST00000563498 D6RAR5 112 aa18.88■□□□□ 0.61
NME3-204ENST00000563498 F8VZ95 297 aa18.88■□□□□ 0.61
NME3-204ENST00000563498 BUB1O43683 1085 aa18.88■□□□□ 0.61
NME3-204ENST00000563498 TMCC1O94876 653 aa18.88■□□□□ 0.61
NME3-204ENST00000563498 IGSF6O95976 241 aa18.88■□□□□ 0.61
NME3-204ENST00000563498 PLEKP08567 350 aaPredicted RBP18.88■□□□□ 0.61
NME3-204ENST00000563498 MMP8P22894 467 aa18.88■□□□□ 0.61
NME3-204ENST00000563498 IRF4Q15306 451 aa18.88■□□□□ 0.61
NME3-204ENST00000563498 CDO1Q16878 200 aa18.88■□□□□ 0.61
NME3-204ENST00000563498 C15orf59Q2T9L4 293 aaPredicted RBP18.88■□□□□ 0.61
NME3-204ENST00000563498 ZSCAN23Q3MJ62 389 aa18.88■□□□□ 0.61
NME3-204ENST00000563498 TMEM52BQ4KMG9 183 aa18.88■□□□□ 0.61
NME3-204ENST00000563498 LRRC73Q5JTD7 316 aa18.88■□□□□ 0.61
NME3-204ENST00000563498 XKR5Q6UX68 686 aa18.88■□□□□ 0.61
NME3-204ENST00000563498 LEKR1Q6ZMV7 388 aa18.88■□□□□ 0.61
NME3-204ENST00000563498 RAB11FIP2Q7L804 512 aa18.88■□□□□ 0.61
NME3-204ENST00000563498 FBXO39Q8N4B4 442 aa18.88■□□□□ 0.61
NME3-204ENST00000563498 KYQ8NBH2 561 aa18.88■□□□□ 0.61
NME3-204ENST00000563498 OR6C4Q8NGE1 309 aa18.88■□□□□ 0.61
NME3-204ENST00000563498 PCDH19Q8TAB3 1148 aa18.88■□□□□ 0.61
NME3-204ENST00000563498 HCAR2Q8TDS4 363 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms