RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 VCPIP1Q96JH7 1222 aa14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 NPAS2Q99743 824 aa14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 VRTNQ9H8Y1 702 aa14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 EFCAB1Q9HAE3 211 aa14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 SCUBE2Q9NQ36 999 aa14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 RAB6BQ9NRW1 208 aa14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 PSME2Q9UL46 239 aa14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 C3orf70A6NLC5 250 aaPredicted RBP14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 GLRA3O75311 464 aa14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 MMP3P08254 477 aa14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 CXCR2P25025 360 aa14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 ATP6V0D1P61421 351 aa14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 TNK2Q07912 1038 aa14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 GRM1Q13255 1194 aa14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 SURF1Q15526 300 aa14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 UTS2BQ765I0 119 aa14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 AKAP14Q86UN6 197 aa14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 OFCC1Q8IZS5 231 aa14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 CBR4Q8N4T8 237 aa14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 JOSD2Q8TAC2 188 aa14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 UBA3Q8TBC4 463 aa14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 DEPDC1BQ8WUY9 529 aa14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 MUC3BQ9H195 1237 aa14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 POLE4Q9NR33 117 aa14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 MOSPD1Q9UJG1 213 aa14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 CNOT6Q9ULM6 557 aaKnown RBP14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 TCAF1Q9Y4C2 921 aa14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 GPSM3Q9Y4H4 160 aa14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 TSPAN1O60635 241 aa14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 GMPRP36959 345 aa14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 NUMBP49757 651 aa14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 CLK3P49761 638 aaKnown RBP14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 CSE1LP55060 971 aaKnown RBP14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 TRIM25Q14258 630 aaKnown RBP14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 BBS12Q6ZW61 710 aa14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 PIWIL3Q7Z3Z3 882 aaKnown RBP14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 REM2Q8IYK8 340 aaPredicted RBP14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 LINC01465Q8N7H1 131 aa14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 OR13F1Q8NGS4 319 aa14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 CYGBQ8WWM9 190 aa14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 FBXL20Q96IG2 436 aa14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 CNDP1Q96KN2 507 aa14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 MARK4Q96L34 752 aa14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 GLT1D1Q96MS3 346 aa14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 CPXM1Q96SM3 734 aa14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 C17orf80Q9BSJ5 609 aa14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 RMND5AQ9H871 391 aa14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 MOV10Q9HCE1 1003 aaKnown RBP14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 COPG2Q9UBF2 871 aa14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 E2F8A0AVK6 867 aa14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 TTC34A8MYJ7 566 aa14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 DLGAP1O14490 977 aa14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 TPP1O14773 563 aa14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 AURKAO14965 403 aa14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 GABBR2O75899 941 aa14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 SERPINB9P50453 376 aa14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 MERTKQ12866 999 aa14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 DUSP28Q4G0W2 176 aa14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 STXBP5Q5T5C0 1151 aa14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 IQSEC1Q6DN90 963 aa14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 TMC5Q6UXY8 1006 aa14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 GALNT13Q8IUC8 556 aa14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 C12orf29Q8N999 325 aa14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 SPERTQ8NA61 448 aa14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 FEM1CQ96JP0 617 aa14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 CSF3RQ99062 836 aa14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 OSMRQ99650 979 aa14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 ELOVL4Q9GZR5 314 aa14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 TRIT1Q9H3H1 467 aaKnown RBP14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 SFMBT1Q9UHJ3 866 aa14.15□□□□□ -0.14
GTF3C1-203ENST00000562609 PPEF2O14830 753 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 TEX28O15482 410 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 PARNO95453 639 aaKnown RBP14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 ALDOAP04075 364 aaKnown RBP14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 CCL14Q16627 93 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 SPRYD7Q5W111 196 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 DARS2Q6PI48 645 aaKnown RBP14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 PLEKHH3Q7Z736 793 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 PCDH20Q8N6Y1 951 aaKnown RBP14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 SLC4A11Q8NBS3 891 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 SPATA18Q8TC71 538 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 FNIP1Q8TF40 1166 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 HPDLQ96IR7 371 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 FANCEQ9HB96 536 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 SLC17A6Q9P2U8 582 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 PCDHGC3Q9UN70 934 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 PCDHB12Q9Y5F1 795 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 TRIP12Q14669 1992 aaPredicted RBP14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 SCN1AP35498 2009 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 GOLGA8CPA6NN73 597 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 CENPBD1B2RD01 187 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 NUAK1O60285 661 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 IL18RAPO95256 599 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 UBL4AP11441 157 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 SLC7A1P30825 629 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 POLR2IP36954 125 aaKnown RBP14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 PTPN9P43378 593 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 PRKAA2P54646 552 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 CLCQ05315 142 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 GRB14Q14449 540 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms