RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 RETSATQ6NUM9 610 aa3.27□□□□□ -1.89
DENND4A-205ENST00000562540 CYP26C1Q6V0L0 522 aa3.27□□□□□ -1.89
DENND4A-205ENST00000562540 GHDCQ8N2G8 530 aa3.27□□□□□ -1.89
DENND4A-205ENST00000562540 HORMAD2Q8N7B1 307 aa3.27□□□□□ -1.89
DENND4A-205ENST00000562540 SCAIQ8N9R8 606 aa3.27□□□□□ -1.89
DENND4A-205ENST00000562540 FAR1Q8WVX9 515 aa3.27□□□□□ -1.89
DENND4A-205ENST00000562540 HERVK_113Q902F9 699 aa3.27□□□□□ -1.89
DENND4A-205ENST00000562540 STAMQ92783 540 aa3.27□□□□□ -1.89
DENND4A-205ENST00000562540 MASTLQ96GX5 879 aa3.27□□□□□ -1.89
DENND4A-205ENST00000562540 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.27□□□□□ -1.89
DENND4A-205ENST00000562540 HIPK3Q9H422 1215 aa3.27□□□□□ -1.89
DENND4A-205ENST00000562540 STN1Q9H668 368 aaKnown RBP3.27□□□□□ -1.89
DENND4A-205ENST00000562540 ALKBH4Q9NXW9 302 aa3.27□□□□□ -1.89
DENND4A-205ENST00000562540 SAGE1Q9NXZ1 904 aa3.27□□□□□ -1.89
DENND4A-205ENST00000562540 SRPRBQ9Y5M8 271 aaKnown RBP3.27□□□□□ -1.89
DENND4A-205ENST00000562540 IGLV5-52A0A0A0MRZ9 124 aa3.26□□□□□ -1.89
DENND4A-205ENST00000562540 OR6C68A6NDL8 312 aa3.26□□□□□ -1.89
DENND4A-205ENST00000562540 RRN3P2A6NIE6 340 aa3.26□□□□□ -1.89
DENND4A-205ENST00000562540 TMCC1O94876 653 aa3.26□□□□□ -1.89
DENND4A-205ENST00000562540 SOX30O94993 753 aa3.26□□□□□ -1.89
DENND4A-205ENST00000562540 DDAH2O95865 285 aa3.26□□□□□ -1.89
DENND4A-205ENST00000562540 CKMT1AP12532 417 aa3.26□□□□□ -1.89
DENND4A-205ENST00000562540 PRKCHP24723 683 aa3.26□□□□□ -1.89
DENND4A-205ENST00000562540 C21orf33P30042 268 aaPredicted RBP3.26□□□□□ -1.89
DENND4A-205ENST00000562540 GJC1P36383 396 aa3.26□□□□□ -1.89
DENND4A-205ENST00000562540 THPOP40225 353 aa3.26□□□□□ -1.89
DENND4A-205ENST00000562540 VEGFCP49767 419 aa3.26□□□□□ -1.89
DENND4A-205ENST00000562540 CLCNKBP51801 687 aa3.26□□□□□ -1.89
DENND4A-205ENST00000562540 BNC1Q01954 994 aa3.26□□□□□ -1.89
DENND4A-205ENST00000562540 TBL3Q12788 808 aaKnown RBP3.26□□□□□ -1.89
DENND4A-205ENST00000562540 ILF3Q12906 894 aaKnown RBP eCLIP3.26□□□□□ -1.89
DENND4A-205ENST00000562540 SNTA1Q13424 505 aa3.26□□□□□ -1.89
DENND4A-205ENST00000562540 PLK5Q496M5 336 aa3.26□□□□□ -1.89
DENND4A-205ENST00000562540 HSP90AB4PQ58FF6 505 aa3.26□□□□□ -1.89
DENND4A-205ENST00000562540 WDR5BQ86VZ2 330 aa3.26□□□□□ -1.89
DENND4A-205ENST00000562540 SPEM1Q8N4L4 309 aa3.26□□□□□ -1.89
DENND4A-205ENST00000562540 POC1AQ8NBT0 407 aa3.26□□□□□ -1.89
DENND4A-205ENST00000562540 SLC35F5Q8WV83 523 aa3.26□□□□□ -1.89
DENND4A-205ENST00000562540 SH3KBP1Q96B97 665 aa3.26□□□□□ -1.89
DENND4A-205ENST00000562540 RNFT2Q96EX2 444 aa3.26□□□□□ -1.89
DENND4A-205ENST00000562540 ZNF333Q96JL9 665 aa3.26□□□□□ -1.89
DENND4A-205ENST00000562540 IL17FQ96PD4 163 aa3.26□□□□□ -1.89
DENND4A-205ENST00000562540 UHRF2Q96PU4 802 aa3.26□□□□□ -1.89
DENND4A-205ENST00000562540 TEFMQ96QE5 360 aaKnown RBP3.26□□□□□ -1.89
DENND4A-205ENST00000562540 REEP2Q9BRK0 252 aa3.26□□□□□ -1.89
DENND4A-205ENST00000562540 POLR3GLQ9BT43 218 aa3.26□□□□□ -1.89
DENND4A-205ENST00000562540 NPLQ9BXD5 320 aaPredicted RBP3.26□□□□□ -1.89
DENND4A-205ENST00000562540 MROH8Q9H579 483 aa3.26□□□□□ -1.89
DENND4A-205ENST00000562540 TLR8Q9NR97 1041 aaKnown RBP3.26□□□□□ -1.89
DENND4A-205ENST00000562540 CD207Q9UJ71 328 aa3.26□□□□□ -1.89
DENND4A-205ENST00000562540 LRRFIP2Q9Y608 721 aaKnown RBP3.26□□□□□ -1.89
DENND4A-205ENST00000562540 SAA2-SAA4A0A096LPE2 208 aa3.25□□□□□ -1.89
DENND4A-205ENST00000562540 C17orf100A8MU93 164 aa3.25□□□□□ -1.89
DENND4A-205ENST00000562540 DHX16O60231 1041 aaKnown RBP3.25□□□□□ -1.89
DENND4A-205ENST00000562540 PAK4O96013 591 aaPredicted RBP3.25□□□□□ -1.89
DENND4A-205ENST00000562540 LDLRP01130 860 aa3.25□□□□□ -1.89
DENND4A-205ENST00000562540 POLBP06746 335 aa3.25□□□□□ -1.89
DENND4A-205ENST00000562540 AMD1P17707 334 aa3.25□□□□□ -1.89
DENND4A-205ENST00000562540 MTNR1AP48039 350 aa3.25□□□□□ -1.89
DENND4A-205ENST00000562540 CRIP2P52943 208 aaPredicted RBP3.25□□□□□ -1.89
DENND4A-205ENST00000562540 CHRNDQ07001 517 aa3.25□□□□□ -1.89
DENND4A-205ENST00000562540 TRPC3Q13507 836 aa3.25□□□□□ -1.89
DENND4A-205ENST00000562540 EFHC1Q5JVL4 640 aa3.25□□□□□ -1.89
DENND4A-205ENST00000562540 SH2D4BQ5SQS7 431 aa3.25□□□□□ -1.89
DENND4A-205ENST00000562540 TMEM268Q5VZI3 342 aa3.25□□□□□ -1.89
DENND4A-205ENST00000562540 GJB7Q6PEY0 223 aa3.25□□□□□ -1.89
DENND4A-205ENST00000562540 BBS12Q6ZW61 710 aa3.25□□□□□ -1.89
DENND4A-205ENST00000562540 ZNF771Q7L3S4 317 aaPredicted RBP3.25□□□□□ -1.89
DENND4A-205ENST00000562540 EXOC3L1Q86VI1 746 aa3.25□□□□□ -1.89
DENND4A-205ENST00000562540 CPOQ8IVL8 374 aa3.25□□□□□ -1.89
DENND4A-205ENST00000562540 DBF4BQ8NFT6 615 aa3.25□□□□□ -1.89
DENND4A-205ENST00000562540 CTCFLQ8NI51 663 aaPredicted RBP3.25□□□□□ -1.89
DENND4A-205ENST00000562540 CEP76Q8TAP6 659 aa3.25□□□□□ -1.89
DENND4A-205ENST00000562540 SPATA20Q8TB22 786 aa3.25□□□□□ -1.89
DENND4A-205ENST00000562540 GFM1Q96RP9 751 aaKnown RBP3.25□□□□□ -1.89
DENND4A-205ENST00000562540 CD180Q99467 661 aa3.25□□□□□ -1.89
DENND4A-205ENST00000562540 SLC25A33Q9BSK2 321 aa3.25□□□□□ -1.89
DENND4A-205ENST00000562540 C1QTNF5Q9BXJ0 243 aa3.25□□□□□ -1.89
DENND4A-205ENST00000562540 GPR63Q9BZJ6 419 aa3.25□□□□□ -1.89
DENND4A-205ENST00000562540 TTC12Q9H892 705 aaPredicted RBP3.25□□□□□ -1.89
DENND4A-205ENST00000562540 ENTPD7Q9NQZ7 604 aa3.25□□□□□ -1.89
DENND4A-205ENST00000562540 MALT1Q9UDY8 824 aa3.25□□□□□ -1.89
DENND4A-205ENST00000562540 FBXO40Q9UH90 709 aa3.25□□□□□ -1.89
DENND4A-205ENST00000562540 AGO1Q9UL18 857 aaKnown RBP3.25□□□□□ -1.89
DENND4A-205ENST00000562540 GTF2A1LQ9UNN4 478 aa3.25□□□□□ -1.89
DENND4A-205ENST00000562540 OSGIN2Q9Y236 505 aa3.25□□□□□ -1.89
DENND4A-205ENST00000562540 RAI2Q9Y5P3 530 aa3.25□□□□□ -1.89
DENND4A-205ENST00000562540 A0A0A0MQY5 61 aa3.24□□□□□ -1.89
DENND4A-205ENST00000562540 IGHV4-28A0A0C4DH34 117 aa3.24□□□□□ -1.89
DENND4A-205ENST00000562540 ITM2AO43736 263 aa3.24□□□□□ -1.89
DENND4A-205ENST00000562540 IL1AP01583 271 aa3.24□□□□□ -1.89
DENND4A-205ENST00000562540 IFIT1P09914 478 aaKnown RBP3.24□□□□□ -1.89
DENND4A-205ENST00000562540 MYZAPP0CAP1 466 aa3.24□□□□□ -1.89
DENND4A-205ENST00000562540 UNGP13051 313 aaPredicted RBP3.24□□□□□ -1.89
DENND4A-205ENST00000562540 YWHAQP27348 245 aa3.24□□□□□ -1.89
DENND4A-205ENST00000562540 HNF1BP35680 557 aa3.24□□□□□ -1.89
DENND4A-205ENST00000562540 PSMC2P35998 433 aaKnown RBP3.24□□□□□ -1.89
DENND4A-205ENST00000562540 PGM1P36871 562 aa3.24□□□□□ -1.89
DENND4A-205ENST00000562540 PTPN9P43378 593 aa3.24□□□□□ -1.89
DENND4A-205ENST00000562540 CCR5P51681 352 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms