RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 LVRNQ6Q4G3 990 aa11.99□□□□□ -0.49
CARMIL3-204ENST00000561354 GDPD4Q6W3E5 623 aa11.99□□□□□ -0.49
CARMIL3-204ENST00000561354 MACC1Q6ZN28 852 aa11.99□□□□□ -0.49
CARMIL3-204ENST00000561354 TTC7BQ86TV6 843 aa11.99□□□□□ -0.49
CARMIL3-204ENST00000561354 NOP9Q86U38 636 aaKnown RBP11.99□□□□□ -0.49
CARMIL3-204ENST00000561354 VPS36Q86VN1 386 aa11.99□□□□□ -0.49
CARMIL3-204ENST00000561354 KLHL32Q96NJ5 620 aa11.99□□□□□ -0.49
CARMIL3-204ENST00000561354 CCDC3Q9BQI4 270 aa11.99□□□□□ -0.49
CARMIL3-204ENST00000561354 NAA15Q9BXJ9 866 aaKnown RBP11.99□□□□□ -0.49
CARMIL3-204ENST00000561354 CLPBQ9H078 707 aa11.99□□□□□ -0.49
CARMIL3-204ENST00000561354 DNAI1Q9UI46 699 aa11.99□□□□□ -0.49
CARMIL3-204ENST00000561354 PADI4Q9UM07 663 aa11.99□□□□□ -0.49
CARMIL3-204ENST00000561354 MFHAS1Q9Y4C4 1052 aa11.99□□□□□ -0.49
CARMIL3-204ENST00000561354 FHOD1Q9Y613 1164 aa11.99□□□□□ -0.49
CARMIL3-204ENST00000561354 RP1P56715 2156 aa11.99□□□□□ -0.49
CARMIL3-204ENST00000561354 MGAQ8IWI9 3026 aa11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 KALRNO60229 2985 aa11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 ZSCAN5CA6NGD5 496 aaPredicted RBP11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 NTN3O00634 580 aaPredicted RBP11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 MMP20O60882 483 aa11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 RAMP2O60895 175 aa11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 LRIG2O94898 1065 aa11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 MMEP08473 750 aa11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 UCHL3P15374 230 aa11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 TSHRP16473 764 aa11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 SDC4P31431 198 aa11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 PEX5P50542 639 aa11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 SUOXP51687 545 aa11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 PPARDQ03181 441 aa11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 RAD51Q06609 339 aa11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 C1QBPQ07021 282 aaKnown RBP11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 CLN3Q13286 438 aa11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 EIF3IQ13347 325 aaKnown RBP11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 CAMK4Q16566 473 aa11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 TPD52L1Q16890 204 aaPredicted RBP11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 CCDC14Q49A88 953 aa11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 NAA35Q5VZE5 725 aa11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 CCDC81Q6ZN84 652 aa11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 STRADAQ7RTN6 431 aa11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 SDR16C5Q8N3Y7 309 aa11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 FSTL5Q8N475 847 aaPredicted RBP11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 EMC1Q8N766 993 aa11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 ARL10Q8N8L6 244 aa11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 TP53I13Q8NBR0 393 aaPredicted RBP11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 EPS8L1Q8TE68 723 aa11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 SCG3Q8WXD2 468 aaKnown RBP11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 CASKIN2Q8WXE0 1202 aa11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 CPA5Q8WXQ8 436 aa11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 LIN37Q96GY3 246 aaPredicted RBP11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 GDAP1L1Q96MZ0 367 aa11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 TUBGCP2Q9BSJ2 902 aa11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 STK33Q9BYT3 514 aa11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 TTYH3Q9C0H2 523 aa11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 MBNL1Q9NR56 388 aaKnown RBP11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 METTL5Q9NRN9 209 aaKnown RBP11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 DKK3Q9UBP4 350 aa11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 NEU3Q9UQ49 428 aa11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 PCDHGA7Q9Y5G6 932 aa11.98□□□□□ -0.49
CARMIL3-204ENST00000561354 PMS2P1A4D2B8 440 aa11.97□□□□□ -0.49
CARMIL3-204ENST00000561354 C2CD4BA6NLJ0 364 aa11.97□□□□□ -0.49
CARMIL3-204ENST00000561354 TMEM110-MUSTN1A8MSY1 372 aa11.97□□□□□ -0.49
CARMIL3-204ENST00000561354 F8VZ95 297 aa11.97□□□□□ -0.49
CARMIL3-204ENST00000561354 FAM72CH0Y354 149 aa11.97□□□□□ -0.49
CARMIL3-204ENST00000561354 TMX2-CTNND1H3BSU7 103 aa11.97□□□□□ -0.49
CARMIL3-204ENST00000561354 ALPIP09923 528 aa11.97□□□□□ -0.49
CARMIL3-204ENST00000561354 MMP8P22894 467 aa11.97□□□□□ -0.49
CARMIL3-204ENST00000561354 PTPN9P43378 593 aa11.97□□□□□ -0.49
CARMIL3-204ENST00000561354 HK3P52790 923 aa11.97□□□□□ -0.49
CARMIL3-204ENST00000561354 ELOCQ15369 112 aa11.97□□□□□ -0.49
CARMIL3-204ENST00000561354 CDO1Q16878 200 aa11.97□□□□□ -0.49
CARMIL3-204ENST00000561354 C15orf59Q2T9L4 293 aaPredicted RBP11.97□□□□□ -0.49
CARMIL3-204ENST00000561354 RAB6CQ53S08 254 aa11.97□□□□□ -0.49
CARMIL3-204ENST00000561354 INO80DQ53TQ3 878 aaPredicted RBP11.97□□□□□ -0.49
CARMIL3-204ENST00000561354 ATXN7L2Q5T6C5 722 aaPredicted RBP11.97□□□□□ -0.49
CARMIL3-204ENST00000561354 FAM72AQ5TYM5 149 aa11.97□□□□□ -0.49
CARMIL3-204ENST00000561354 KIAA1614Q5VZ46 1190 aa11.97□□□□□ -0.49
CARMIL3-204ENST00000561354 FAM72DQ6L9T8 149 aa11.97□□□□□ -0.49
CARMIL3-204ENST00000561354 FOXR1Q6PIV2 292 aa11.97□□□□□ -0.49
CARMIL3-204ENST00000561354 FAM72BQ86X60 149 aa11.97□□□□□ -0.49
CARMIL3-204ENST00000561354 ZNF677Q86XU0 584 aa11.97□□□□□ -0.49
CARMIL3-204ENST00000561354 HCAR2Q8TDS4 363 aa11.97□□□□□ -0.49
CARMIL3-204ENST00000561354 CXorf40AQ8TE69 158 aa11.97□□□□□ -0.49
CARMIL3-204ENST00000561354 RXFP2Q8WXD0 754 aa11.97□□□□□ -0.49
CARMIL3-204ENST00000561354 CENPIQ92674 756 aaPredicted RBP11.97□□□□□ -0.49
CARMIL3-204ENST00000561354 NTAN1Q96AB6 310 aa11.97□□□□□ -0.49
CARMIL3-204ENST00000561354 TBC1D31Q96DN5 1066 aa11.97□□□□□ -0.49
CARMIL3-204ENST00000561354 CCNL2Q96S94 520 aaPredicted RBP11.97□□□□□ -0.49
CARMIL3-204ENST00000561354 EPAS1Q99814 870 aa11.97□□□□□ -0.49
CARMIL3-204ENST00000561354 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.97□□□□□ -0.49
CARMIL3-204ENST00000561354 RAB6CQ9H0N0 254 aa11.97□□□□□ -0.49
CARMIL3-204ENST00000561354 ASH1LQ9NR48 2969 aaKnown RBP11.97□□□□□ -0.49
CARMIL3-204ENST00000561354 ACSL6Q9UKU0 697 aa11.97□□□□□ -0.49
CARMIL3-204ENST00000561354 ATXN7L1Q9ULK2 861 aaPredicted RBP11.97□□□□□ -0.49
CARMIL3-204ENST00000561354 SETXQ7Z333 2677 aaKnown RBP11.97□□□□□ -0.49
CARMIL3-204ENST00000561354 KIF26BQ2KJY2 2108 aa11.96□□□□□ -0.49
CARMIL3-204ENST00000561354 FAM170AA1A519 330 aa11.96□□□□□ -0.49
CARMIL3-204ENST00000561354 PLD2O14939 933 aa11.96□□□□□ -0.49
CARMIL3-204ENST00000561354 CASC3O15234 703 aaKnown RBP11.96□□□□□ -0.49
CARMIL3-204ENST00000561354 BUB1O43683 1085 aa11.96□□□□□ -0.49
CARMIL3-204ENST00000561354 TMCC1O94876 653 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms