RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 ADRB3P13945 408 aa10.82□□□□□ -0.68
TPM1-229ENST00000561242 CXCR5P32302 372 aa10.82□□□□□ -0.68
TPM1-229ENST00000561242 NBL1P41271 181 aa10.82□□□□□ -0.68
TPM1-229ENST00000561242 CD86P42081 329 aa10.82□□□□□ -0.68
TPM1-229ENST00000561242 MARCKSL1P49006 195 aa10.82□□□□□ -0.68
TPM1-229ENST00000561242 MAXP61244 160 aa10.82□□□□□ -0.68
TPM1-229ENST00000561242 IFI35P80217 286 aaPredicted RBP10.82□□□□□ -0.68
TPM1-229ENST00000561242 SARNPP82979 210 aaKnown RBP10.82□□□□□ -0.68
TPM1-229ENST00000561242 CNTN1Q12860 1018 aa10.82□□□□□ -0.68
TPM1-229ENST00000561242 TCF15Q12870 199 aa10.82□□□□□ -0.68
TPM1-229ENST00000561242 DUOXA1Q1HG43 343 aa10.82□□□□□ -0.68
TPM1-229ENST00000561242 MAP7D1Q3KQU3 841 aa10.82□□□□□ -0.68
TPM1-229ENST00000561242 PLK5Q496M5 336 aa10.82□□□□□ -0.68
TPM1-229ENST00000561242 DNTTIP2Q5QJE6 756 aaKnown RBP10.82□□□□□ -0.68
TPM1-229ENST00000561242 DCAF12L1Q5VU92 463 aa10.82□□□□□ -0.68
TPM1-229ENST00000561242 KIAA1161Q6NSJ0 714 aa10.82□□□□□ -0.68
TPM1-229ENST00000561242 NCEH1Q6PIU2 408 aa10.82□□□□□ -0.68
TPM1-229ENST00000561242 ARHGAP36Q6ZRI8 547 aa10.82□□□□□ -0.68
TPM1-229ENST00000561242 CAMK1DQ8IU85 385 aa10.82□□□□□ -0.68
TPM1-229ENST00000561242 SYT12Q8IV01 421 aa10.82□□□□□ -0.68
TPM1-229ENST00000561242 MAML2Q8IZL2 1156 aaPredicted RBP10.82□□□□□ -0.68
TPM1-229ENST00000561242 ATL2Q8NHH9 583 aa10.82□□□□□ -0.68
TPM1-229ENST00000561242 FAM174AQ8TBP5 190 aa10.82□□□□□ -0.68
TPM1-229ENST00000561242 KLC2Q9H0B6 622 aa10.82□□□□□ -0.68
TPM1-229ENST00000561242 DUSP15Q9H1R2 295 aaPredicted RBP10.82□□□□□ -0.68
TPM1-229ENST00000561242 EPC1Q9H2F5 836 aa10.82□□□□□ -0.68
TPM1-229ENST00000561242 SAE1Q9UBE0 346 aaPredicted RBP10.82□□□□□ -0.68
TPM1-229ENST00000561242 DKK3Q9UBP4 350 aa10.82□□□□□ -0.68
TPM1-229ENST00000561242 RNF14Q9UBS8 474 aa10.82□□□□□ -0.68
TPM1-229ENST00000561242 FAM153AQ9UHL3 310 aa10.82□□□□□ -0.68
TPM1-229ENST00000561242 NEU3Q9UQ49 428 aa10.82□□□□□ -0.68
TPM1-229ENST00000561242 DMTF1Q9Y222 760 aa10.82□□□□□ -0.68
TPM1-229ENST00000561242 PCDHB9Q9Y5E1 797 aa10.82□□□□□ -0.68
TPM1-229ENST00000561242 RAI2Q9Y5P3 530 aa10.82□□□□□ -0.68
TPM1-229ENST00000561242 SAR1BQ9Y6B6 198 aa10.82□□□□□ -0.68
TPM1-229ENST00000561242 TICRRQ7Z2Z1 1910 aa10.82□□□□□ -0.68
TPM1-229ENST00000561242 ANAPC1Q9H1A4 1944 aa10.82□□□□□ -0.68
TPM1-229ENST00000561242 CDH23Q9H251 3354 aa10.82□□□□□ -0.68
TPM1-229ENST00000561242 METTL12A8MUP2 240 aa10.81□□□□□ -0.68
TPM1-229ENST00000561242 UPK3BL1B0FP48 263 aa10.81□□□□□ -0.68
TPM1-229ENST00000561242 UPK3BL2E5RIL1 263 aa10.81□□□□□ -0.68
TPM1-229ENST00000561242 RNF103O00237 685 aa10.81□□□□□ -0.68
TPM1-229ENST00000561242 FPGTO14772 594 aa10.81□□□□□ -0.68
TPM1-229ENST00000561242 DDX3YO15523 660 aaKnown RBP10.81□□□□□ -0.68
TPM1-229ENST00000561242 OPHN1O60890 802 aa10.81□□□□□ -0.68
TPM1-229ENST00000561242 RNGTTO60942 597 aaKnown RBP10.81□□□□□ -0.68
TPM1-229ENST00000561242 LILRB5O75023 590 aa10.81□□□□□ -0.68
TPM1-229ENST00000561242 PIGNO95427 931 aa10.81□□□□□ -0.68
TPM1-229ENST00000561242 ELFN1P0C7U0 828 aa10.81□□□□□ -0.68
TPM1-229ENST00000561242 RBL1P28749 1068 aa10.81□□□□□ -0.68
TPM1-229ENST00000561242 HOXD12P35452 270 aa10.81□□□□□ -0.68
TPM1-229ENST00000561242 CCR5P51681 352 aa10.81□□□□□ -0.68
TPM1-229ENST00000561242 RPL26P61254 145 aaKnown RBP10.81□□□□□ -0.68
TPM1-229ENST00000561242 SRSF5Q13243 272 aaKnown RBP10.81□□□□□ -0.68
TPM1-229ENST00000561242 SNX1Q13596 522 aa10.81□□□□□ -0.68
TPM1-229ENST00000561242 ACOX1Q15067 660 aa10.81□□□□□ -0.68
TPM1-229ENST00000561242 NOMO1Q15155 1222 aa10.81□□□□□ -0.68
TPM1-229ENST00000561242 PCSK7Q16549 785 aa10.81□□□□□ -0.68
TPM1-229ENST00000561242 AASDHQ4L235 1098 aaPredicted RBP10.81□□□□□ -0.68
TPM1-229ENST00000561242 DENND2CQ68D51 928 aa10.81□□□□□ -0.68
TPM1-229ENST00000561242 IL27RAQ6UWB1 636 aa10.81□□□□□ -0.68
TPM1-229ENST00000561242 REXO1L1PQ8IX06 675 aa10.81□□□□□ -0.68
TPM1-229ENST00000561242 FAM160A2Q8N612 972 aaPredicted RBP10.81□□□□□ -0.68
TPM1-229ENST00000561242 ALG3Q92685 438 aa10.81□□□□□ -0.68
TPM1-229ENST00000561242 MAGOHBQ96A72 148 aaKnown RBP10.81□□□□□ -0.68
TPM1-229ENST00000561242 MYO19Q96H55 970 aa10.81□□□□□ -0.68
TPM1-229ENST00000561242 SERAC1Q96JX3 654 aa10.81□□□□□ -0.68
TPM1-229ENST00000561242 ZC3H10Q96K80 434 aaKnown RBP10.81□□□□□ -0.68
TPM1-229ENST00000561242 QKIQ96PU8 341 aaKnown RBP eCLIP10.81□□□□□ -0.68
TPM1-229ENST00000561242 MGME1Q9BQP7 344 aa10.81□□□□□ -0.68
TPM1-229ENST00000561242 MLPHQ9BV36 600 aaPredicted RBP10.81□□□□□ -0.68
TPM1-229ENST00000561242 SLC25A51Q9H1U9 297 aa10.81□□□□□ -0.68
TPM1-229ENST00000561242 ARRDC1-AS1Q9H2J1 176 aa10.81□□□□□ -0.68
TPM1-229ENST00000561242 KCNF1Q9H3M0 494 aa10.81□□□□□ -0.68
TPM1-229ENST00000561242 PDFQ9HBH1 243 aa10.81□□□□□ -0.68
TPM1-229ENST00000561242 NOD2Q9HC29 1040 aa10.81□□□□□ -0.68
TPM1-229ENST00000561242 GLOD4Q9HC38 313 aa10.81□□□□□ -0.68
TPM1-229ENST00000561242 VPS45Q9NRW7 570 aa10.81□□□□□ -0.68
TPM1-229ENST00000561242 RAD18Q9NS91 495 aa10.81□□□□□ -0.68
TPM1-229ENST00000561242 C2orf42Q9NWW7 574 aa10.81□□□□□ -0.68
TPM1-229ENST00000561242 LHX3Q9UBR4 397 aa10.81□□□□□ -0.68
TPM1-229ENST00000561242 HCN2Q9UL51 889 aa10.81□□□□□ -0.68
TPM1-229ENST00000561242 RPL26L1Q9UNX3 145 aaKnown RBP10.81□□□□□ -0.68
TPM1-229ENST00000561242 PCDHGC4Q9Y5F7 938 aa10.81□□□□□ -0.68
TPM1-229ENST00000561242 ACTL7AQ9Y615 435 aa10.81□□□□□ -0.68
TPM1-229ENST00000561242 A0A0U1RQJ8 604 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 A0A1B0GTW7 788 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 A0A1W2PQU0 124 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 BCLAF3A2AJT9 711 aaKnown RBP10.8□□□□□ -0.68
TPM1-229ENST00000561242 ANTXRLA6NF34 631 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 PRAMEF26H0Y7S4 382 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 AP3B1O00203 1094 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 NDC80O14777 642 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 SLC31A1O15431 190 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 PLRG1O43660 514 aaKnown RBP10.8□□□□□ -0.68
TPM1-229ENST00000561242 AP1G1O43747 822 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 GFRA3O60609 400 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 PMPCBO75439 489 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 HEXIM1O94992 359 aaKnown RBP10.8□□□□□ -0.68
TPM1-229ENST00000561242 SDHBP21912 280 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms