RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 SLC22A3O75751 556 aa3.31□□□□□ -1.88
USP8-216ENST00000561206 METTL18O95568 372 aa3.31□□□□□ -1.88
USP8-216ENST00000561206 NBPF7P0C2Y1 421 aaPredicted RBP3.31□□□□□ -1.88
USP8-216ENST00000561206 LINC00271P0C7V0 271 aa3.31□□□□□ -1.88
USP8-216ENST00000561206 DHRS4L1P0CG22 281 aa3.31□□□□□ -1.88
USP8-216ENST00000561206 ZNF883P0CG24 379 aa3.31□□□□□ -1.88
USP8-216ENST00000561206 PNPLA4P41247 253 aa3.31□□□□□ -1.88
USP8-216ENST00000561206 MVDP53602 400 aa3.31□□□□□ -1.88
USP8-216ENST00000561206 SLC18A2Q05940 514 aa3.31□□□□□ -1.88
USP8-216ENST00000561206 BTKQ06187 659 aa3.31□□□□□ -1.88
USP8-216ENST00000561206 PDCLQ13371 301 aa3.31□□□□□ -1.88
USP8-216ENST00000561206 THOC5Q13769 683 aaKnown RBP3.31□□□□□ -1.88
USP8-216ENST00000561206 TNFAIP1Q13829 316 aa3.31□□□□□ -1.88
USP8-216ENST00000561206 ME3Q16798 604 aa3.31□□□□□ -1.88
USP8-216ENST00000561206 RUNDC3AQ59EK9 446 aa3.31□□□□□ -1.88
USP8-216ENST00000561206 SYNE3Q6ZMZ3 975 aa3.31□□□□□ -1.88
USP8-216ENST00000561206 LRRC8CQ8TDW0 803 aa3.31□□□□□ -1.88
USP8-216ENST00000561206 OTUD7AQ8TE49 926 aaPredicted RBP3.31□□□□□ -1.88
USP8-216ENST00000561206 FBXO17Q96EF6 278 aa3.31□□□□□ -1.88
USP8-216ENST00000561206 ATP8A2Q9NTI2 1148 aa3.31□□□□□ -1.88
USP8-216ENST00000561206 CDC23Q9UJX2 597 aa3.31□□□□□ -1.88
USP8-216ENST00000561206 KCND3Q9UK17 655 aa3.31□□□□□ -1.88
USP8-216ENST00000561206 CLDN16Q9Y5I7 305 aa3.31□□□□□ -1.88
USP8-216ENST00000561206 FAM72CH0Y354 149 aa3.3□□□□□ -1.88
USP8-216ENST00000561206 HBP1O60381 514 aa3.3□□□□□ -1.88
USP8-216ENST00000561206 CLDN14O95500 239 aa3.3□□□□□ -1.88
USP8-216ENST00000561206 RNF224P0DH78 156 aa3.3□□□□□ -1.88
USP8-216ENST00000561206 PTPN9P43378 593 aa3.3□□□□□ -1.88
USP8-216ENST00000561206 CENPAP49450 140 aa3.3□□□□□ -1.88
USP8-216ENST00000561206 BRWD1-AS2P59051 145 aa3.3□□□□□ -1.88
USP8-216ENST00000561206 GALNT1Q10472 559 aaPredicted RBP3.3□□□□□ -1.88
USP8-216ENST00000561206 CHAF1AQ13111 956 aaPredicted RBP3.3□□□□□ -1.88
USP8-216ENST00000561206 BYSLQ13895 437 aaKnown RBP3.3□□□□□ -1.88
USP8-216ENST00000561206 CAPSQ13938 189 aa3.3□□□□□ -1.88
USP8-216ENST00000561206 IL13RA2Q14627 380 aa3.3□□□□□ -1.88
USP8-216ENST00000561206 SLC1A5Q15758 541 aa3.3□□□□□ -1.88
USP8-216ENST00000561206 AP5B1Q2VPB7 878 aa3.3□□□□□ -1.88
USP8-216ENST00000561206 FAM72AQ5TYM5 149 aa3.3□□□□□ -1.88
USP8-216ENST00000561206 FAM72DQ6L9T8 149 aa3.3□□□□□ -1.88
USP8-216ENST00000561206 KLHL17Q6TDP4 642 aa3.3□□□□□ -1.88
USP8-216ENST00000561206 SRLQ86TD4 932 aa3.3□□□□□ -1.88
USP8-216ENST00000561206 MON1AQ86VX9 555 aa3.3□□□□□ -1.88
USP8-216ENST00000561206 FAM72BQ86X60 149 aa3.3□□□□□ -1.88
USP8-216ENST00000561206 SFTPA2Q8IWL1 248 aa3.3□□□□□ -1.88
USP8-216ENST00000561206 FSIP1Q8NA03 581 aa3.3□□□□□ -1.88
USP8-216ENST00000561206 ZMIZ2Q8NF64 920 aa3.3□□□□□ -1.88
USP8-216ENST00000561206 RASSF8Q8NHQ8 419 aa3.3□□□□□ -1.88
USP8-216ENST00000561206 LNX1Q8TBB1 728 aaPredicted RBP3.3□□□□□ -1.88
USP8-216ENST00000561206 RNF183Q96D59 192 aa3.3□□□□□ -1.88
USP8-216ENST00000561206 HERC2P3Q9BVR0 1158 aa3.3□□□□□ -1.88
USP8-216ENST00000561206 ARFGAP3Q9NP61 516 aa3.3□□□□□ -1.88
USP8-216ENST00000561206 ANKRD10Q9NXR5 420 aa3.3□□□□□ -1.88
USP8-216ENST00000561206 HDAC6Q9UBN7 1215 aa3.3□□□□□ -1.88
USP8-216ENST00000561206 SIX4Q9UIU6 781 aa3.3□□□□□ -1.88
USP8-216ENST00000561206 TCF19Q9Y242 345 aa3.3□□□□□ -1.88
USP8-216ENST00000561206 hDV102S1A0JD36 115 aa3.29□□□□□ -1.88
USP8-216ENST00000561206 WNT9BO14905 357 aa3.29□□□□□ -1.88
USP8-216ENST00000561206 FGF17O60258 216 aa3.29□□□□□ -1.88
USP8-216ENST00000561206 IL1AP01583 271 aa3.29□□□□□ -1.88
USP8-216ENST00000561206 CSF1P09603 554 aa3.29□□□□□ -1.88
USP8-216ENST00000561206 CETPP11597 493 aa3.29□□□□□ -1.88
USP8-216ENST00000561206 KCNA5P22460 613 aa3.29□□□□□ -1.88
USP8-216ENST00000561206 MARK3P27448 753 aa3.29□□□□□ -1.88
USP8-216ENST00000561206 TTKP33981 857 aa3.29□□□□□ -1.88
USP8-216ENST00000561206 CDKN1AP38936 164 aa3.29□□□□□ -1.88
USP8-216ENST00000561206 LIFRP42702 1097 aa3.29□□□□□ -1.88
USP8-216ENST00000561206 PICALMQ13492 652 aa3.29□□□□□ -1.88
USP8-216ENST00000561206 PFKFB4Q16877 469 aa3.29□□□□□ -1.88
USP8-216ENST00000561206 PLA2G4FQ68DD2 849 aa3.29□□□□□ -1.88
USP8-216ENST00000561206 ZNF772Q68DY9 489 aaPredicted RBP3.29□□□□□ -1.88
USP8-216ENST00000561206 C19orf48Q6RUI8 117 aa3.29□□□□□ -1.88
USP8-216ENST00000561206 KSR2Q6VAB6 950 aa3.29□□□□□ -1.88
USP8-216ENST00000561206 SFR1Q86XK3 245 aa3.29□□□□□ -1.88
USP8-216ENST00000561206 CIARTQ8N365 385 aaPredicted RBP3.29□□□□□ -1.88
USP8-216ENST00000561206 ZNF527Q8NB42 609 aa3.29□□□□□ -1.88
USP8-216ENST00000561206 SETD9Q8NE22 299 aa3.29□□□□□ -1.88
USP8-216ENST00000561206 ARRDC2Q8TBH0 407 aa3.29□□□□□ -1.88
USP8-216ENST00000561206 FIG4Q92562 907 aa3.29□□□□□ -1.88
USP8-216ENST00000561206 TNIP3Q96KP6 325 aa3.29□□□□□ -1.88
USP8-216ENST00000561206 ZNF696Q9H7X3 374 aa3.29□□□□□ -1.88
USP8-216ENST00000561206 ZNF334Q9HCZ1 680 aaPredicted RBP3.29□□□□□ -1.88
USP8-216ENST00000561206 SLCO3A1Q9UIG8 710 aa3.29□□□□□ -1.88
USP8-216ENST00000561206 VDAC3Q9Y277 283 aa3.29□□□□□ -1.88
USP8-216ENST00000561206 IGKV6D-41A0A0C4DH26 115 aa3.28□□□□□ -1.88
USP8-216ENST00000561206 SKAP2O75563 359 aaPredicted RBP3.28□□□□□ -1.88
USP8-216ENST00000561206 SERPINC1P01008 464 aa3.28□□□□□ -1.88
USP8-216ENST00000561206 AMBPP02760 352 aa3.28□□□□□ -1.88
USP8-216ENST00000561206 FGF5P12034 268 aa3.28□□□□□ -1.88
USP8-216ENST00000561206 MCM3P25205 808 aa3.28□□□□□ -1.88
USP8-216ENST00000561206 PDIA3P30101 505 aaKnown RBP3.28□□□□□ -1.88
USP8-216ENST00000561206 TIMP3P35625 211 aa3.28□□□□□ -1.88
USP8-216ENST00000561206 SERPINF1P36955 418 aa3.28□□□□□ -1.88
USP8-216ENST00000561206 GNALP38405 381 aa3.28□□□□□ -1.88
USP8-216ENST00000561206 NEK3P51956 506 aa3.28□□□□□ -1.88
USP8-216ENST00000561206 FUT6P51993 359 aa3.28□□□□□ -1.88
USP8-216ENST00000561206 ARHGAP8P85298 464 aa3.28□□□□□ -1.88
USP8-216ENST00000561206 ZNF155Q12901 538 aaPredicted RBP3.28□□□□□ -1.88
USP8-216ENST00000561206 OASLQ15646 514 aaKnown RBP3.28□□□□□ -1.88
USP8-216ENST00000561206 IL31Q6EBC2 164 aa3.28□□□□□ -1.88
USP8-216ENST00000561206 GGT6Q6P531 493 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms