RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 PRLRP16471 622 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 SERPINA4P29622 427 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 GKP32189 559 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 HOXD12P35452 270 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 SCNN1BP51168 640 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 CCR5P51681 352 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 NEK3P51956 506 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 ADPRHP54922 357 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 RPL6Q02878 288 aaKnown RBP9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 BCL2L1Q07817 233 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 WASHC5Q12768 1159 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 ZBTB17Q13105 803 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 SLC14A2Q15849 920 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 ZNF569Q5MCW4 686 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 DRICH1Q6PGQ1 229 aaPredicted RBP9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 PARS2Q7L3T8 475 aaKnown RBP9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 ALYREFQ86V81 257 aaKnown RBP9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 ZC3H18Q86VM9 953 aaKnown RBP9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 CACUL1Q86Y37 369 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 CAMK1DQ8IU85 385 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 SLC35F6Q8N357 371 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 RYBPQ8N488 228 aaPredicted RBP9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 OR6K2Q8NGY2 324 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 MAIP1Q8WWC4 291 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 HTR3CQ8WXA8 447 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 TEKT5Q96M29 485 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 KLHL32Q96NJ5 620 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 GPR174Q9BXC1 333 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 NOD2Q9HC29 1040 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 PREBQ9HCU5 417 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 NT5MQ9NPB1 228 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 SCUBE2Q9NQ36 999 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 DYRK4Q9NR20 520 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 TRHDEQ9UKU6 1024 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 RAB23Q9ULC3 237 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 SMG5Q9UPR3 1016 aaKnown RBP9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 ZKSCAN5Q9Y2L8 839 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 FADS3Q9Y5Q0 445 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 TDRD6O60522 2096 aaKnown RBP9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 ZNF106Q9H2Y7 1883 aaKnown RBP9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 GPR179Q6PRD1 2367 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 DMDP11532 3685 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 TCRBV7S2A1N4TA0A589 114 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 CFAP69A5D8W1 941 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 LRRC72A6NJI9 287 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 ENC1O14682 589 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 TSPAN6O43657 245 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 LRP3O75074 770 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 EPN2O95208 641 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 PIGNO95427 931 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 RETP07949 1114 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 MMP2P08253 660 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 SERPINF2P08697 491 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 TIMP2P16035 220 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 PTPN3P26045 913 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 RBL1P28749 1068 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 NUDT1P36639 197 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 EIF3EP60228 445 aaKnown RBP9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 MAXP61244 160 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 POLR2LP62875 67 aaKnown RBP9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 NIPAL4Q0D2K0 466 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 IHHQ14623 411 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 SIX1Q15475 284 aaPredicted RBP9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 UGP2Q16851 508 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 CCDC181Q5TID7 509 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 PAPD7Q5XG87 772 aaKnown RBP9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 KIAA0895LQ68EN5 471 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 FBXL19Q6PCT2 694 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 PRR23BQ6ZRT6 265 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 TTC7BQ86TV6 843 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 FAM124AQ86V42 546 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 TRIM69Q86WT6 500 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 SLC41A1Q8IVJ1 513 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 CDKL3Q8IVW4 592 aaPredicted RBP9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 TMEFF1Q8IYR6 380 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 C1orf216Q8TAB5 229 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 GANCQ8TET4 914 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 LRRN4Q8WUT4 740 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 ASB12Q8WXK4 309 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 BIRC7Q96CA5 298 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 HAUS1Q96CS2 278 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 RTP4Q96DX8 246 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 IMP4Q96G21 291 aaKnown RBP9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 PHOX2BQ99453 314 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 SEMA3CQ99985 751 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 FERMT1Q9BQL6 677 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 SLC25A51Q9H1U9 297 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 C6orf106Q9H6K1 298 aaPredicted RBP9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 SNX12Q9UMY4 172 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 FRYLO94915 3013 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 MYLKQ15746 1914 aa9.72□□□□□ -0.85
RABGGTA-221ENST00000561055 CFAP54Q96N23 3096 aa9.71□□□□□ -0.85
RABGGTA-221ENST00000561055 PRR23AA6NEV1 266 aa9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 C5orf60A6NFR6 353 aa9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 H7C0C1 242 aa9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 PLK4O00444 970 aa9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 SPINT1O43278 529 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms