RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 TSTD2Q5T7W7 516 aa17.28■□□□□ 0.36
HDDC3-206ENST00000561036 NCEH1Q6PIU2 408 aa17.28■□□□□ 0.36
HDDC3-206ENST00000561036 LINGO4Q6UY18 593 aa17.28■□□□□ 0.36
HDDC3-206ENST00000561036 TMEM184AQ6ZMB5 413 aa17.28■□□□□ 0.36
HDDC3-206ENST00000561036 KDELC2Q7Z4H8 507 aa17.28■□□□□ 0.36
HDDC3-206ENST00000561036 TMEM25Q86YD3 366 aa17.28■□□□□ 0.36
HDDC3-206ENST00000561036 APCDD1Q8J025 514 aa17.28■□□□□ 0.36
HDDC3-206ENST00000561036 RIN3Q8TB24 985 aa17.28■□□□□ 0.36
HDDC3-206ENST00000561036 GDPD5Q8WTR4 605 aa17.28■□□□□ 0.36
HDDC3-206ENST00000561036 CKAP2Q8WWK9 683 aa17.28■□□□□ 0.36
HDDC3-206ENST00000561036 MRPL38Q96DV4 380 aaKnown RBP17.28■□□□□ 0.36
HDDC3-206ENST00000561036 RBBP8Q99708 897 aa17.28■□□□□ 0.36
HDDC3-206ENST00000561036 FAM167BQ9BTA0 163 aa17.28■□□□□ 0.36
HDDC3-206ENST00000561036 ADGRE3Q9BY15 652 aa17.28■□□□□ 0.36
HDDC3-206ENST00000561036 ACTL7AQ9Y615 435 aa17.28■□□□□ 0.36
HDDC3-206ENST00000561036 MIA3Q5JRA6 1907 aa17.27■□□□□ 0.36
HDDC3-206ENST00000561036 HMX2A2RU54 273 aa17.27■□□□□ 0.36
HDDC3-206ENST00000561036 TIMM44O43615 452 aa17.27■□□□□ 0.36
HDDC3-206ENST00000561036 ITGA2BP08514 1039 aa17.27■□□□□ 0.36
HDDC3-206ENST00000561036 PYGBP11216 843 aa17.27■□□□□ 0.36
HDDC3-206ENST00000561036 RPA3P35244 121 aaPredicted RBP17.27■□□□□ 0.36
HDDC3-206ENST00000561036 POLD2P49005 469 aa17.27■□□□□ 0.36
HDDC3-206ENST00000561036 NEK3P51956 506 aa17.27■□□□□ 0.36
HDDC3-206ENST00000561036 RHOAP61586 193 aa17.27■□□□□ 0.36
HDDC3-206ENST00000561036 SULT2A1Q06520 285 aa17.27■□□□□ 0.36
HDDC3-206ENST00000561036 ESRP1Q6NXG1 681 aaKnown RBP17.27■□□□□ 0.36
HDDC3-206ENST00000561036 STRA8Q7Z7C7 330 aa17.27■□□□□ 0.36
HDDC3-206ENST00000561036 SRLQ86TD4 932 aa17.27■□□□□ 0.36
HDDC3-206ENST00000561036 VN1R2Q8NFZ6 395 aa17.27■□□□□ 0.36
HDDC3-206ENST00000561036 ITFG1Q8TB96 612 aa17.27■□□□□ 0.36
HDDC3-206ENST00000561036 CALML6Q8TD86 181 aa17.27■□□□□ 0.36
HDDC3-206ENST00000561036 BRSK1Q8TDC3 778 aa17.27■□□□□ 0.36
HDDC3-206ENST00000561036 BHMTQ93088 406 aa17.27■□□□□ 0.36
HDDC3-206ENST00000561036 ISL2Q96A47 359 aa17.27■□□□□ 0.36
HDDC3-206ENST00000561036 CHMP6Q96FZ7 201 aa17.27■□□□□ 0.36
HDDC3-206ENST00000561036 ZNF778Q96MU6 729 aa17.27■□□□□ 0.36
HDDC3-206ENST00000561036 BBS2Q9BXC9 721 aa17.27■□□□□ 0.36
HDDC3-206ENST00000561036 TDRD1Q9BXT4 1180 aaKnown RBP17.27■□□□□ 0.36
HDDC3-206ENST00000561036 PLK2Q9NYY3 685 aa17.27■□□□□ 0.36
HDDC3-206ENST00000561036 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.26■□□□□ 0.35
HDDC3-206ENST00000561036 COPEO14579 308 aa17.26■□□□□ 0.35
HDDC3-206ENST00000561036 SLC7A4O43246 635 aa17.26■□□□□ 0.35
HDDC3-206ENST00000561036 GJB3O75712 270 aa17.26■□□□□ 0.35
HDDC3-206ENST00000561036 VAPBO95292 243 aa17.26■□□□□ 0.35
HDDC3-206ENST00000561036 ASMTLO95671 621 aa17.26■□□□□ 0.35
HDDC3-206ENST00000561036 FAM107AO95990 144 aa17.26■□□□□ 0.35
HDDC3-206ENST00000561036 CD70P32970 193 aa17.26■□□□□ 0.35
HDDC3-206ENST00000561036 BMP8BP34820 402 aa17.26■□□□□ 0.35
HDDC3-206ENST00000561036 LIMK2P53671 638 aa17.26■□□□□ 0.35
HDDC3-206ENST00000561036 WDR4P57081 412 aaKnown RBP17.26■□□□□ 0.35
HDDC3-206ENST00000561036 ACVR1Q04771 509 aa17.26■□□□□ 0.35
HDDC3-206ENST00000561036 THOC5Q13769 683 aaKnown RBP17.26■□□□□ 0.35
HDDC3-206ENST00000561036 SEPT7Q16181 437 aaKnown RBP17.26■□□□□ 0.35
HDDC3-206ENST00000561036 CNGA3Q16281 694 aa17.26■□□□□ 0.35
HDDC3-206ENST00000561036 PITRM1Q5JRX3 1037 aa17.26■□□□□ 0.35
HDDC3-206ENST00000561036 MROH9Q5TGP6 573 aa17.26■□□□□ 0.35
HDDC3-206ENST00000561036 HHATQ5VTY9 493 aa17.26■□□□□ 0.35
HDDC3-206ENST00000561036 TMC5Q6UXY8 1006 aa17.26■□□□□ 0.35
HDDC3-206ENST00000561036 KIAA0408Q6ZU52 694 aa17.26■□□□□ 0.35
HDDC3-206ENST00000561036 LMNTD2Q8IXW0 634 aa17.26■□□□□ 0.35
HDDC3-206ENST00000561036 ADGRG2Q8IZP9 1017 aa17.26■□□□□ 0.35
HDDC3-206ENST00000561036 C12orf76Q8N812 135 aaPredicted RBP17.26■□□□□ 0.35
HDDC3-206ENST00000561036 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.26■□□□□ 0.35
HDDC3-206ENST00000561036 MGARPQ8TDB4 240 aa17.26■□□□□ 0.35
HDDC3-206ENST00000561036 BCAS4Q8TDM0 211 aa17.26■□□□□ 0.35
HDDC3-206ENST00000561036 ING5Q8WYH8 240 aa17.26■□□□□ 0.35
HDDC3-206ENST00000561036 ISG20Q96AZ6 181 aaKnown RBP17.26■□□□□ 0.35
HDDC3-206ENST00000561036 MAGEB18Q96M61 343 aa17.26■□□□□ 0.35
HDDC3-206ENST00000561036 ZNF317Q96PQ6 595 aaPredicted RBP17.26■□□□□ 0.35
HDDC3-206ENST00000561036 MCMBPQ9BTE3 642 aa17.26■□□□□ 0.35
HDDC3-206ENST00000561036 IARS2Q9NSE4 1012 aaKnown RBP17.26■□□□□ 0.35
HDDC3-206ENST00000561036 CLEC4EQ9ULY5 219 aa17.26■□□□□ 0.35
HDDC3-206ENST00000561036 RAI2Q9Y5P3 530 aa17.26■□□□□ 0.35
HDDC3-206ENST00000561036 PSAT1Q9Y617 370 aa17.26■□□□□ 0.35
HDDC3-206ENST00000561036 ATG2AQ2TAZ0 1938 aa17.25■□□□□ 0.35
HDDC3-206ENST00000561036 NUP210Q8TEM1 1887 aaPredicted RBP17.25■□□□□ 0.35
HDDC3-206ENST00000561036 LDB2O43679 373 aa17.25■□□□□ 0.35
HDDC3-206ENST00000561036 CRTAMO95727 393 aa17.25■□□□□ 0.35
HDDC3-206ENST00000561036 FSHRP23945 695 aa17.25■□□□□ 0.35
HDDC3-206ENST00000561036 ARNTP27540 789 aa17.25■□□□□ 0.35
HDDC3-206ENST00000561036 CRHR1P34998 444 aa17.25■□□□□ 0.35
HDDC3-206ENST00000561036 RPL26P61254 145 aaKnown RBP17.25■□□□□ 0.35
HDDC3-206ENST00000561036 BMPR2Q13873 1038 aa17.25■□□□□ 0.35
HDDC3-206ENST00000561036 RGS9BPQ6ZS82 235 aa17.25■□□□□ 0.35
HDDC3-206ENST00000561036 ZNF771Q7L3S4 317 aaPredicted RBP17.25■□□□□ 0.35
HDDC3-206ENST00000561036 KIAA0907Q7Z7F0 614 aaPredicted RBP17.25■□□□□ 0.35
HDDC3-206ENST00000561036 GALNT7Q86SF2 657 aa17.25■□□□□ 0.35
HDDC3-206ENST00000561036 GPR149Q86SP6 731 aa17.25■□□□□ 0.35
HDDC3-206ENST00000561036 SPOCK2Q92563 424 aa17.25■□□□□ 0.35
HDDC3-206ENST00000561036 CABS1Q96KC9 395 aa17.25■□□□□ 0.35
HDDC3-206ENST00000561036 EXOC2Q96KP1 924 aa17.25■□□□□ 0.35
HDDC3-206ENST00000561036 CCT8L2Q96SF2 557 aa17.25■□□□□ 0.35
HDDC3-206ENST00000561036 AGAP2Q99490 1192 aa17.25■□□□□ 0.35
HDDC3-206ENST00000561036 CEP44Q9C0F1 390 aa17.25■□□□□ 0.35
HDDC3-206ENST00000561036 LINC00597Q9H2U6 94 aa17.25■□□□□ 0.35
HDDC3-206ENST00000561036 RHOJQ9H4E5 214 aa17.25■□□□□ 0.35
HDDC3-206ENST00000561036 OBP2AQ9NY56 170 aa17.25■□□□□ 0.35
HDDC3-206ENST00000561036 GDE1Q9NZC3 331 aa17.25■□□□□ 0.35
HDDC3-206ENST00000561036 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.25■□□□□ 0.35
HDDC3-206ENST00000561036 INTS6Q9UL03 887 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms