RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 TRAFD1O14545 582 aaPredicted RBP12.39□□□□□ -0.43
USP8-209ENST00000560297 MID1O15344 667 aa12.39□□□□□ -0.43
USP8-209ENST00000560297 PSMD3O43242 534 aa12.39□□□□□ -0.43
USP8-209ENST00000560297 HTRA2O43464 458 aaPredicted RBP12.39□□□□□ -0.43
USP8-209ENST00000560297 GALR2O43603 387 aaPredicted RBP12.39□□□□□ -0.43
USP8-209ENST00000560297 GAS8O95995 478 aa12.39□□□□□ -0.43
USP8-209ENST00000560297 UGT2B4P06133 528 aa12.39□□□□□ -0.43
USP8-209ENST00000560297 GOLGA6DP0CG33 693 aa12.39□□□□□ -0.43
USP8-209ENST00000560297 NFKB1P19838 968 aa12.39□□□□□ -0.43
USP8-209ENST00000560297 ITGB7P26010 798 aa12.39□□□□□ -0.43
USP8-209ENST00000560297 OXTRP30559 389 aa12.39□□□□□ -0.43
USP8-209ENST00000560297 GKP32189 559 aa12.39□□□□□ -0.43
USP8-209ENST00000560297 CD86P42081 329 aa12.39□□□□□ -0.43
USP8-209ENST00000560297 PSMD8P48556 350 aa12.39□□□□□ -0.43
USP8-209ENST00000560297 SUOXP51687 545 aa12.39□□□□□ -0.43
USP8-209ENST00000560297 GDF10P55107 478 aa12.39□□□□□ -0.43
USP8-209ENST00000560297 SKOR1P84550 965 aa12.39□□□□□ -0.43
USP8-209ENST00000560297 USP39Q53GS9 565 aaKnown RBP12.39□□□□□ -0.43
USP8-209ENST00000560297 CFAP58Q5T655 872 aa12.39□□□□□ -0.43
USP8-209ENST00000560297 ZNF572Q7Z3I7 529 aaPredicted RBP12.39□□□□□ -0.43
USP8-209ENST00000560297 PRPF39Q86UA1 669 aaKnown RBP12.39□□□□□ -0.43
USP8-209ENST00000560297 CAMK1DQ8IU85 385 aa12.39□□□□□ -0.43
USP8-209ENST00000560297 HDDC3Q8N4P3 179 aa12.39□□□□□ -0.43
USP8-209ENST00000560297 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.39□□□□□ -0.43
USP8-209ENST00000560297 MNS1Q8NEH6 495 aa12.39□□□□□ -0.43
USP8-209ENST00000560297 SPATA4Q8NEY3 305 aa12.39□□□□□ -0.43
USP8-209ENST00000560297 GANCQ8TET4 914 aa12.39□□□□□ -0.43
USP8-209ENST00000560297 SPOCK2Q92563 424 aa12.39□□□□□ -0.43
USP8-209ENST00000560297 SLCO2A1Q92959 643 aa12.39□□□□□ -0.43
USP8-209ENST00000560297 TADA1Q96BN2 335 aa12.39□□□□□ -0.43
USP8-209ENST00000560297 LRRC45Q96CN5 670 aa12.39□□□□□ -0.43
USP8-209ENST00000560297 KLHL32Q96NJ5 620 aa12.39□□□□□ -0.43
USP8-209ENST00000560297 OMDQ99983 421 aa12.39□□□□□ -0.43
USP8-209ENST00000560297 FBXL12Q9NXK8 326 aa12.39□□□□□ -0.43
USP8-209ENST00000560297 GOLGA6AQ9NYA3 693 aa12.39□□□□□ -0.43
USP8-209ENST00000560297 USP36Q9P275 1121 aaKnown RBP12.39□□□□□ -0.43
USP8-209ENST00000560297 FAM153AQ9UHL3 310 aa12.39□□□□□ -0.43
USP8-209ENST00000560297 FZD4Q9ULV1 537 aa12.39□□□□□ -0.43
USP8-209ENST00000560297 ARIH1Q9Y4X5 557 aaPredicted RBP12.39□□□□□ -0.43
USP8-209ENST00000560297 PCDHGC4Q9Y5F7 938 aa12.39□□□□□ -0.43
USP8-209ENST00000560297 MRFAP1Q9Y605 127 aa12.39□□□□□ -0.43
USP8-209ENST00000560297 NYNRINQ9P2P1 1898 aaKnown RBP12.39□□□□□ -0.43
USP8-209ENST00000560297 TTC24A2A3L6 582 aaPredicted RBP12.38□□□□□ -0.43
USP8-209ENST00000560297 C16orf96A6NNT2 1141 aa12.38□□□□□ -0.43
USP8-209ENST00000560297 SLC7A4O43246 635 aa12.38□□□□□ -0.43
USP8-209ENST00000560297 ECEL1O95672 775 aa12.38□□□□□ -0.43
USP8-209ENST00000560297 EPOP01588 193 aa12.38□□□□□ -0.43
USP8-209ENST00000560297 IGLV3-19P01714 112 aa12.38□□□□□ -0.43
USP8-209ENST00000560297 MMP2P08253 660 aa12.38□□□□□ -0.43
USP8-209ENST00000560297 TDGF1P13385 188 aa12.38□□□□□ -0.43
USP8-209ENST00000560297 NFKBIAP25963 317 aa12.38□□□□□ -0.43
USP8-209ENST00000560297 FDFT1P37268 417 aa12.38□□□□□ -0.43
USP8-209ENST00000560297 TNNT3P45378 269 aaPredicted RBP12.38□□□□□ -0.43
USP8-209ENST00000560297 TPMTP51580 245 aa12.38□□□□□ -0.43
USP8-209ENST00000560297 GEMP55040 296 aa12.38□□□□□ -0.43
USP8-209ENST00000560297 RPL26P61254 145 aaKnown RBP12.38□□□□□ -0.43
USP8-209ENST00000560297 MPP3Q13368 585 aa12.38□□□□□ -0.43
USP8-209ENST00000560297 ANGPT1Q15389 498 aa12.38□□□□□ -0.43
USP8-209ENST00000560297 DNTTIP2Q5QJE6 756 aaKnown RBP12.38□□□□□ -0.43
USP8-209ENST00000560297 ARMC12Q5T9G4 340 aa12.38□□□□□ -0.43
USP8-209ENST00000560297 CCDC70Q6NSX1 233 aa12.38□□□□□ -0.43
USP8-209ENST00000560297 TTC27Q6P3X3 843 aa12.38□□□□□ -0.43
USP8-209ENST00000560297 FBXL19Q6PCT2 694 aa12.38□□□□□ -0.43
USP8-209ENST00000560297 SYDE1Q6ZW31 735 aaPredicted RBP12.38□□□□□ -0.43
USP8-209ENST00000560297 ERN2Q76MJ5 926 aaKnown RBP12.38□□□□□ -0.43
USP8-209ENST00000560297 TTC7BQ86TV6 843 aa12.38□□□□□ -0.43
USP8-209ENST00000560297 WDR5BQ86VZ2 330 aa12.38□□□□□ -0.43
USP8-209ENST00000560297 LONP2Q86WA8 852 aa12.38□□□□□ -0.43
USP8-209ENST00000560297 NDUFAF2Q8N183 169 aa12.38□□□□□ -0.43
USP8-209ENST00000560297 PAF1Q8N7H5 531 aa12.38□□□□□ -0.43
USP8-209ENST00000560297 CCHCR1Q8TD31 782 aa12.38□□□□□ -0.43
USP8-209ENST00000560297 RAB7BQ96AH8 199 aa12.38□□□□□ -0.43
USP8-209ENST00000560297 VOPP1Q96AW1 172 aa12.38□□□□□ -0.43
USP8-209ENST00000560297 ECHDC3Q96DC8 303 aa12.38□□□□□ -0.43
USP8-209ENST00000560297 RBM15Q96T37 977 aaKnown RBP eCLIP12.38□□□□□ -0.43
USP8-209ENST00000560297 ADGRE3Q9BY15 652 aa12.38□□□□□ -0.43
USP8-209ENST00000560297 DDX47Q9H0S4 455 aaKnown RBP12.38□□□□□ -0.43
USP8-209ENST00000560297 SLC6A17Q9H1V8 727 aa12.38□□□□□ -0.43
USP8-209ENST00000560297 NEUROG2Q9H2A3 272 aa12.38□□□□□ -0.43
USP8-209ENST00000560297 KDM4CQ9H3R0 1056 aa12.38□□□□□ -0.43
USP8-209ENST00000560297 SGK2Q9HBY8 427 aa12.38□□□□□ -0.43
USP8-209ENST00000560297 RPL26L1Q9UNX3 145 aaKnown RBP12.38□□□□□ -0.43
USP8-209ENST00000560297 RAI2Q9Y5P3 530 aa12.38□□□□□ -0.43
USP8-209ENST00000560297 TSPAN11A1L157 253 aa12.37□□□□□ -0.43
USP8-209ENST00000560297 GJB3O75712 270 aa12.37□□□□□ -0.43
USP8-209ENST00000560297 RNASEH2AO75792 299 aaKnown RBP12.37□□□□□ -0.43
USP8-209ENST00000560297 PGLSO95336 258 aa12.37□□□□□ -0.43
USP8-209ENST00000560297 PIGNO95427 931 aa12.37□□□□□ -0.43
USP8-209ENST00000560297 SP9P0CG40 484 aa12.37□□□□□ -0.43
USP8-209ENST00000560297 TIMP2P16035 220 aa12.37□□□□□ -0.43
USP8-209ENST00000560297 XPAP23025 273 aaPredicted RBP12.37□□□□□ -0.43
USP8-209ENST00000560297 CNR2P34972 360 aa12.37□□□□□ -0.43
USP8-209ENST00000560297 RPL22P35268 128 aaKnown RBP12.37□□□□□ -0.43
USP8-209ENST00000560297 P2RY2P41231 377 aa12.37□□□□□ -0.43
USP8-209ENST00000560297 PXNP49023 591 aaPredicted RBP12.37□□□□□ -0.43
USP8-209ENST00000560297 NEK3P51956 506 aa12.37□□□□□ -0.43
USP8-209ENST00000560297 CDK18Q07002 472 aa12.37□□□□□ -0.43
USP8-209ENST00000560297 UGP2Q16851 508 aa12.37□□□□□ -0.43
USP8-209ENST00000560297 POM121L1PQ3SYA9 428 aa12.37□□□□□ -0.43
USP8-209ENST00000560297 TSSK4Q6SA08 328 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms