RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 RHBDD1Q8TEB9 315 aa11.79□□□□□ -0.52
RABGGTA-216ENST00000560243 CCDC42Q96M95 316 aa11.79□□□□□ -0.52
RABGGTA-216ENST00000560243 CNTNAP3BQ96NU0 1288 aa11.79□□□□□ -0.52
RABGGTA-216ENST00000560243 KLF6Q99612 283 aaPredicted RBP11.79□□□□□ -0.52
RABGGTA-216ENST00000560243 OSBPL1AQ9BXW6 950 aa11.79□□□□□ -0.52
RABGGTA-216ENST00000560243 SLC17A9Q9BYT1 436 aa11.79□□□□□ -0.52
RABGGTA-216ENST00000560243 CNTNAP3Q9BZ76 1288 aa11.79□□□□□ -0.52
RABGGTA-216ENST00000560243 GDF3Q9NR23 364 aa11.79□□□□□ -0.52
RABGGTA-216ENST00000560243 PCDHGB2Q9Y5G2 931 aa11.79□□□□□ -0.52
RABGGTA-216ENST00000560243 POM121BA6NF01 834 aa11.78□□□□□ -0.52
RABGGTA-216ENST00000560243 NEMP1O14524 444 aa11.78□□□□□ -0.52
RABGGTA-216ENST00000560243 FLRT2O43155 660 aa11.78□□□□□ -0.52
RABGGTA-216ENST00000560243 TSPAN6O43657 245 aa11.78□□□□□ -0.52
RABGGTA-216ENST00000560243 PCDHGA12O60330 932 aa11.78□□□□□ -0.52
RABGGTA-216ENST00000560243 MAFKO60675 156 aa11.78□□□□□ -0.52
RABGGTA-216ENST00000560243 PRKCGP05129 697 aa11.78□□□□□ -0.52
RABGGTA-216ENST00000560243 HNRNPA2B1P22626 353 aaKnown RBP11.78□□□□□ -0.52
RABGGTA-216ENST00000560243 AKT2P31751 481 aa11.78□□□□□ -0.52
RABGGTA-216ENST00000560243 SHC2P98077 582 aa11.78□□□□□ -0.52
RABGGTA-216ENST00000560243 SEMG2Q02383 582 aa11.78□□□□□ -0.52
RABGGTA-216ENST00000560243 RAD51Q06609 339 aa11.78□□□□□ -0.52
RABGGTA-216ENST00000560243 BNIP3Q12983 259 aa11.78□□□□□ -0.52
RABGGTA-216ENST00000560243 DPYSL3Q14195 570 aa11.78□□□□□ -0.52
RABGGTA-216ENST00000560243 MESDQ14696 234 aa11.78□□□□□ -0.52
RABGGTA-216ENST00000560243 HADHQ16836 314 aaKnown RBP11.78□□□□□ -0.52
RABGGTA-216ENST00000560243 SLC45A4Q5BKX6 768 aa11.78□□□□□ -0.52
RABGGTA-216ENST00000560243 KIAA1161Q6NSJ0 714 aa11.78□□□□□ -0.52
RABGGTA-216ENST00000560243 SRLQ86TD4 932 aa11.78□□□□□ -0.52
RABGGTA-216ENST00000560243 SLCO6A1Q86UG4 719 aa11.78□□□□□ -0.52
RABGGTA-216ENST00000560243 IQCHQ86VS3 1027 aa11.78□□□□□ -0.52
RABGGTA-216ENST00000560243 CNGA4Q8IV77 575 aa11.78□□□□□ -0.52
RABGGTA-216ENST00000560243 LZTR1Q8N653 840 aa11.78□□□□□ -0.52
RABGGTA-216ENST00000560243 PCDH19Q8TAB3 1148 aa11.78□□□□□ -0.52
RABGGTA-216ENST00000560243 RAB7BQ96AH8 199 aa11.78□□□□□ -0.52
RABGGTA-216ENST00000560243 SKA1Q96BD8 255 aa11.78□□□□□ -0.52
RABGGTA-216ENST00000560243 KLHDC7BQ96G42 594 aa11.78□□□□□ -0.52
RABGGTA-216ENST00000560243 FEM1CQ96JP0 617 aa11.78□□□□□ -0.52
RABGGTA-216ENST00000560243 BMFQ96LC9 184 aa11.78□□□□□ -0.52
RABGGTA-216ENST00000560243 WRAP53Q9BUR4 548 aaKnown RBP11.78□□□□□ -0.52
RABGGTA-216ENST00000560243 CINPQ9BW66 212 aaPredicted RBP11.78□□□□□ -0.52
RABGGTA-216ENST00000560243 C1QTNF2Q9BXJ5 285 aa11.78□□□□□ -0.52
RABGGTA-216ENST00000560243 CPEB1Q9BZB8 566 aaKnown RBP11.78□□□□□ -0.52
RABGGTA-216ENST00000560243 DKK3Q9UBP4 350 aa11.78□□□□□ -0.52
RABGGTA-216ENST00000560243 ANGPTL2Q9UKU9 493 aa11.78□□□□□ -0.52
RABGGTA-216ENST00000560243 PCDHB9Q9Y5E1 797 aa11.78□□□□□ -0.52
RABGGTA-216ENST00000560243 ASPMQ8IZT6 3477 aa11.78□□□□□ -0.52
RABGGTA-216ENST00000560243 GOLGA4Q13439 2230 aaKnown RBP11.77□□□□□ -0.53
RABGGTA-216ENST00000560243 TSPAN11A1L157 253 aa11.77□□□□□ -0.53
RABGGTA-216ENST00000560243 HYAL3O43820 417 aaPredicted RBP11.77□□□□□ -0.53
RABGGTA-216ENST00000560243 MFSD11O43934 449 aa11.77□□□□□ -0.53
RABGGTA-216ENST00000560243 DFNA5O60443 496 aa11.77□□□□□ -0.53
RABGGTA-216ENST00000560243 MMP20O60882 483 aa11.77□□□□□ -0.53
RABGGTA-216ENST00000560243 SDC3O75056 442 aa11.77□□□□□ -0.53
RABGGTA-216ENST00000560243 MAP3K6O95382 1288 aa11.77□□□□□ -0.53
RABGGTA-216ENST00000560243 ATXN1LP0C7T5 689 aaKnown RBP11.77□□□□□ -0.53
RABGGTA-216ENST00000560243 FTH1P19P0C7X4 201 aa11.77□□□□□ -0.53
RABGGTA-216ENST00000560243 THEGLP0DJG4 465 aa11.77□□□□□ -0.53
RABGGTA-216ENST00000560243 ZNF75DP51815 510 aa11.77□□□□□ -0.53
RABGGTA-216ENST00000560243 LBRQ14739 615 aaKnown RBP11.77□□□□□ -0.53
RABGGTA-216ENST00000560243 TPRG1LQ5T0D9 272 aa11.77□□□□□ -0.53
RABGGTA-216ENST00000560243 TMCO4Q5TGY1 634 aa11.77□□□□□ -0.53
RABGGTA-216ENST00000560243 KANSL1Q7Z3B3 1105 aa11.77□□□□□ -0.53
RABGGTA-216ENST00000560243 ABI3BPQ7Z7G0 1075 aa11.77□□□□□ -0.53
RABGGTA-216ENST00000560243 SLC22A18ASQ8N1D0 253 aa11.77□□□□□ -0.53
RABGGTA-216ENST00000560243 PGBD5Q8N414 524 aa11.77□□□□□ -0.53
RABGGTA-216ENST00000560243 CHCHD4Q8N4Q1 142 aa11.77□□□□□ -0.53
RABGGTA-216ENST00000560243 KCTD6Q8NC69 237 aa11.77□□□□□ -0.53
RABGGTA-216ENST00000560243 SAP25Q8TEE9 199 aa11.77□□□□□ -0.53
RABGGTA-216ENST00000560243 LRRN4Q8WUT4 740 aa11.77□□□□□ -0.53
RABGGTA-216ENST00000560243 RAPGEF5Q92565 580 aa11.77□□□□□ -0.53
RABGGTA-216ENST00000560243 CALN1Q9BXU9 219 aa11.77□□□□□ -0.53
RABGGTA-216ENST00000560243 SUV39H2Q9H5I1 410 aa11.77□□□□□ -0.53
RABGGTA-216ENST00000560243 ERVMER34-1Q9H9K5 563 aa11.77□□□□□ -0.53
RABGGTA-216ENST00000560243 PCDH12Q9NPG4 1184 aa11.77□□□□□ -0.53
RABGGTA-216ENST00000560243 TOR4AQ9NXH8 423 aa11.77□□□□□ -0.53
RABGGTA-216ENST00000560243 TFR2Q9UP52 801 aa11.77□□□□□ -0.53
RABGGTA-216ENST00000560243 HYOU1Q9Y4L1 999 aa11.77□□□□□ -0.53
RABGGTA-216ENST00000560243 GOLGA8CPA6NN73 597 aa11.76□□□□□ -0.53
RABGGTA-216ENST00000560243 MTA2O94776 668 aa11.76□□□□□ -0.53
RABGGTA-216ENST00000560243 EPHA8P29322 1005 aaPredicted RBP11.76□□□□□ -0.53
RABGGTA-216ENST00000560243 MAN1A1P33908 653 aa11.76□□□□□ -0.53
RABGGTA-216ENST00000560243 GRK6P43250 576 aa11.76□□□□□ -0.53
RABGGTA-216ENST00000560243 RXRGP48443 463 aa11.76□□□□□ -0.53
RABGGTA-216ENST00000560243 CSNK1DP48730 415 aa11.76□□□□□ -0.53
RABGGTA-216ENST00000560243 SCNN1BP51168 640 aa11.76□□□□□ -0.53
RABGGTA-216ENST00000560243 OVGP1Q12889 678 aa11.76□□□□□ -0.53
RABGGTA-216ENST00000560243 SGCGQ13326 291 aa11.76□□□□□ -0.53
RABGGTA-216ENST00000560243 HNRNPDQ14103 355 aaKnown RBP11.76□□□□□ -0.53
RABGGTA-216ENST00000560243 RFTN1Q14699 578 aaPredicted RBP11.76□□□□□ -0.53
RABGGTA-216ENST00000560243 SUZ12Q15022 739 aaKnown RBP11.76□□□□□ -0.53
RABGGTA-216ENST00000560243 ANKRD20A8PQ5CZ79 823 aa11.76□□□□□ -0.53
RABGGTA-216ENST00000560243 ZNF542PQ5EBM4 170 aa11.76□□□□□ -0.53
RABGGTA-216ENST00000560243 NCBP2-AS2Q69YL0 99 aa11.76□□□□□ -0.53
RABGGTA-216ENST00000560243 Q6ZSR6 202 aa11.76□□□□□ -0.53
RABGGTA-216ENST00000560243 PTAR1Q7Z6K3 402 aaPredicted RBP11.76□□□□□ -0.53
RABGGTA-216ENST00000560243 GLRX5Q86SX6 157 aa11.76□□□□□ -0.53
RABGGTA-216ENST00000560243 ATPAF2Q8N5M1 289 aa11.76□□□□□ -0.53
RABGGTA-216ENST00000560243 PQLC3Q8N755 202 aa11.76□□□□□ -0.53
RABGGTA-216ENST00000560243 PSKH2Q96QS6 385 aa11.76□□□□□ -0.53
RABGGTA-216ENST00000560243 SCNM1Q9BWG6 230 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms