RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 IFI44Q8TCB0 444 aa20.76■□□□□ 0.91
TSPAN3-206ENST00000559373 RFFLQ8WZ73 363 aa20.76■□□□□ 0.91
TSPAN3-206ENST00000559373 RAB7BQ96AH8 199 aa20.76■□□□□ 0.91
TSPAN3-206ENST00000559373 NAF1Q96HR8 494 aaKnown RBP20.76■□□□□ 0.91
TSPAN3-206ENST00000559373 LENG8Q96PV6 779 aaPredicted RBP20.76■□□□□ 0.91
TSPAN3-206ENST00000559373 NRSN2Q9GZP1 204 aa20.76■□□□□ 0.91
TSPAN3-206ENST00000559373 LHX3Q9UBR4 397 aa20.76■□□□□ 0.91
TSPAN3-206ENST00000559373 DAAM1Q9Y4D1 1078 aa20.76■□□□□ 0.91
TSPAN3-206ENST00000559373 SMG1Q96Q15 3661 aaKnown RBP20.75■□□□□ 0.91
TSPAN3-206ENST00000559373 ANKRD62A6NC57 917 aa20.75■□□□□ 0.91
TSPAN3-206ENST00000559373 NEMP2A6NFY4 417 aa20.75■□□□□ 0.91
TSPAN3-206ENST00000559373 AREL1O15033 823 aa20.75■□□□□ 0.91
TSPAN3-206ENST00000559373 IGSF6O95976 241 aa20.75■□□□□ 0.91
TSPAN3-206ENST00000559373 PRKCGP05129 697 aa20.75■□□□□ 0.91
TSPAN3-206ENST00000559373 MPOP05164 745 aa20.75■□□□□ 0.91
TSPAN3-206ENST00000559373 NME1P15531 152 aaKnown RBP20.75■□□□□ 0.91
TSPAN3-206ENST00000559373 TNFAIP3P21580 790 aa20.75■□□□□ 0.91
TSPAN3-206ENST00000559373 CCDC173Q0VFZ6 552 aa20.75■□□□□ 0.91
TSPAN3-206ENST00000559373 SERINC3Q13530 473 aa20.75■□□□□ 0.91
TSPAN3-206ENST00000559373 CA9Q16790 459 aa20.75■□□□□ 0.91
TSPAN3-206ENST00000559373 KLHL40Q2TBA0 621 aa20.75■□□□□ 0.91
TSPAN3-206ENST00000559373 GUSBP11Q6P575 273 aa20.75■□□□□ 0.91
TSPAN3-206ENST00000559373 IRF2BP2Q7Z5L9 587 aa20.75■□□□□ 0.91
TSPAN3-206ENST00000559373 CXorf40AQ8TE69 158 aa20.75■□□□□ 0.91
TSPAN3-206ENST00000559373 CENPTQ96BT3 561 aa20.75■□□□□ 0.91
TSPAN3-206ENST00000559373 IFT43Q96FT9 208 aa20.75■□□□□ 0.91
TSPAN3-206ENST00000559373 EPAS1Q99814 870 aa20.75■□□□□ 0.91
TSPAN3-206ENST00000559373 CNPY3Q9BT09 278 aa20.75■□□□□ 0.91
TSPAN3-206ENST00000559373 OSBPL1AQ9BXW6 950 aa20.75■□□□□ 0.91
TSPAN3-206ENST00000559373 PCSK1NQ9UHG2 260 aa20.75■□□□□ 0.91
TSPAN3-206ENST00000559373 LRRC10BA6NIK2 292 aa20.74■□□□□ 0.91
TSPAN3-206ENST00000559373 AQP9O43315 295 aa20.74■□□□□ 0.91
TSPAN3-206ENST00000559373 GCATO75600 419 aa20.74■□□□□ 0.91
TSPAN3-206ENST00000559373 TM7SF2O76062 418 aa20.74■□□□□ 0.91
TSPAN3-206ENST00000559373 TPI1P60174 286 aa20.74■□□□□ 0.91
TSPAN3-206ENST00000559373 PFN3P60673 137 aa20.74■□□□□ 0.91
TSPAN3-206ENST00000559373 NCAPGQ9BPX3 1015 aa20.74■□□□□ 0.91
TSPAN3-206ENST00000559373 TRIM7Q9C029 511 aa20.74■□□□□ 0.91
TSPAN3-206ENST00000559373 ABCG4Q9H172 646 aa20.74■□□□□ 0.91
TSPAN3-206ENST00000559373 RETREG1Q9H6L5 497 aa20.74■□□□□ 0.91
TSPAN3-206ENST00000559373 CATSPERBQ9H7T0 1116 aa20.74■□□□□ 0.91
TSPAN3-206ENST00000559373 ZSCAN5CA6NGD5 496 aaPredicted RBP20.73■□□□□ 0.91
TSPAN3-206ENST00000559373 H3BM21 787 aa20.73■□□□□ 0.91
TSPAN3-206ENST00000559373 CSO75390 466 aaKnown RBP20.73■□□□□ 0.91
TSPAN3-206ENST00000559373 CELA2BP08218 269 aaPredicted RBP20.73■□□□□ 0.91
TSPAN3-206ENST00000559373 FERP16591 822 aa20.73■□□□□ 0.91
TSPAN3-206ENST00000559373 TGM2P21980 687 aa20.73■□□□□ 0.91
TSPAN3-206ENST00000559373 THOP1P52888 689 aa20.73■□□□□ 0.91
TSPAN3-206ENST00000559373 ADKP55263 362 aaKnown RBP20.73■□□□□ 0.91
TSPAN3-206ENST00000559373 TYRO3Q06418 890 aa20.73■□□□□ 0.91
TSPAN3-206ENST00000559373 RAD51Q06609 339 aa20.73■□□□□ 0.91
TSPAN3-206ENST00000559373 ANO6Q4KMQ2 910 aa20.73■□□□□ 0.91
TSPAN3-206ENST00000559373 PRRT3Q5FWE3 981 aa20.73■□□□□ 0.91
TSPAN3-206ENST00000559373 EFL1Q7Z2Z2 1120 aaKnown RBP20.73■□□□□ 0.91
TSPAN3-206ENST00000559373 FAM174AQ8TBP5 190 aa20.73■□□□□ 0.91
TSPAN3-206ENST00000559373 PEBP4Q96S96 227 aa20.73■□□□□ 0.91
TSPAN3-206ENST00000559373 SLC39A8Q9C0K1 460 aa20.73■□□□□ 0.91
TSPAN3-206ENST00000559373 DHX35Q9H5Z1 703 aaKnown RBP20.73■□□□□ 0.91
TSPAN3-206ENST00000559373 UBA2Q9UBT2 640 aaPredicted RBP20.73■□□□□ 0.91
TSPAN3-206ENST00000559373 AP4E1Q9UPM8 1137 aa20.73■□□□□ 0.91
TSPAN3-206ENST00000559373 USP12O75317 370 aa20.72■□□□□ 0.91
TSPAN3-206ENST00000559373 XPAP23025 273 aaPredicted RBP20.72■□□□□ 0.91
TSPAN3-206ENST00000559373 PSMA2P25787 234 aa20.72■□□□□ 0.91
TSPAN3-206ENST00000559373 RGRP47804 291 aa20.72■□□□□ 0.91
TSPAN3-206ENST00000559373 YBEYP58557 167 aaPredicted RBP20.72■□□□□ 0.91
TSPAN3-206ENST00000559373 MAMLD1Q13495 774 aa20.72■□□□□ 0.91
TSPAN3-206ENST00000559373 IRF4Q15306 451 aa20.72■□□□□ 0.91
TSPAN3-206ENST00000559373 CCDC183Q5T5S1 534 aa20.72■□□□□ 0.91
TSPAN3-206ENST00000559373 FAXCQ5TGI0 409 aa20.72■□□□□ 0.91
TSPAN3-206ENST00000559373 CDCP2Q5VXM1 449 aa20.72■□□□□ 0.91
TSPAN3-206ENST00000559373 LRRC69Q6ZNQ3 347 aa20.72■□□□□ 0.91
TSPAN3-206ENST00000559373 ARFGAP1Q8N6T3 406 aa20.72■□□□□ 0.91
TSPAN3-206ENST00000559373 TP53I13Q8NBR0 393 aaPredicted RBP20.72■□□□□ 0.91
TSPAN3-206ENST00000559373 MAPK15Q8TD08 544 aa20.72■□□□□ 0.91
TSPAN3-206ENST00000559373 IL12RB2Q99665 862 aa20.72■□□□□ 0.91
TSPAN3-206ENST00000559373 DUSP23Q9BVJ7 150 aa20.72■□□□□ 0.91
TSPAN3-206ENST00000559373 TMEM63CQ9P1W3 806 aa20.72■□□□□ 0.91
TSPAN3-206ENST00000559373 APOBEC3BQ9UH17 382 aaKnown RBP20.72■□□□□ 0.91
TSPAN3-206ENST00000559373 ZFC3H1O60293 1989 aaKnown RBP20.72■□□□□ 0.91
TSPAN3-206ENST00000559373 CXorf51AA0A1B0GTR3 108 aa20.71■□□□□ 0.91
TSPAN3-206ENST00000559373 LRRC53A6NM62 1247 aa20.71■□□□□ 0.91
TSPAN3-206ENST00000559373 WASH4PA8MWX3 477 aa20.71■□□□□ 0.91
TSPAN3-206ENST00000559373 MUSKO15146 869 aa20.71■□□□□ 0.91
TSPAN3-206ENST00000559373 BUB1BO60566 1050 aaPredicted RBP20.71■□□□□ 0.91
TSPAN3-206ENST00000559373 EIF4A3P38919 411 aaKnown RBP20.71■□□□□ 0.91
TSPAN3-206ENST00000559373 PAPOLAP51003 745 aaKnown RBP20.71■□□□□ 0.91
TSPAN3-206ENST00000559373 PARP15Q460N3 678 aa20.71■□□□□ 0.91
TSPAN3-206ENST00000559373 INO80DQ53TQ3 878 aaPredicted RBP20.71■□□□□ 0.91
TSPAN3-206ENST00000559373 PERM1Q5SV97 790 aa20.71■□□□□ 0.91
TSPAN3-206ENST00000559373 E4F1Q66K89 784 aaPredicted RBP20.71■□□□□ 0.91
TSPAN3-206ENST00000559373 ZCCHC8Q6NZY4 707 aaKnown RBP20.71■□□□□ 0.91
TSPAN3-206ENST00000559373 ARHGAP36Q6ZRI8 547 aa20.71■□□□□ 0.91
TSPAN3-206ENST00000559373 ZSWIM9Q86XI8 627 aa20.71■□□□□ 0.91
TSPAN3-206ENST00000559373 CAMK1DQ8IU85 385 aa20.71■□□□□ 0.91
TSPAN3-206ENST00000559373 TP53INP2Q8IXH6 220 aa20.71■□□□□ 0.91
TSPAN3-206ENST00000559373 PHACTR4Q8IZ21 702 aa20.71■□□□□ 0.91
TSPAN3-206ENST00000559373 UMODL1-AS1Q8N2C9 162 aa20.71■□□□□ 0.91
TSPAN3-206ENST00000559373 FAM181AQ8N9Y4 354 aa20.71■□□□□ 0.91
TSPAN3-206ENST00000559373 DENND6BQ8NEG7 585 aa20.71■□□□□ 0.91
TSPAN3-206ENST00000559373 FGF11Q92914 225 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms