RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 ARHGAP12Q8IWW6 846 aa11.56□□□□□ -0.56
CASC4-208ENST00000559151 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.56□□□□□ -0.56
CASC4-208ENST00000559151 FAM185AQ8N0U4 392 aa11.56□□□□□ -0.56
CASC4-208ENST00000559151 TUBB6Q9BUF5 446 aa11.56□□□□□ -0.56
CASC4-208ENST00000559151 PLEKHA4Q9H4M7 779 aa11.56□□□□□ -0.56
CASC4-208ENST00000559151 A0A096LPK6 155 aa11.55□□□□□ -0.56
CASC4-208ENST00000559151 FRMD3A2A2Y4 597 aa11.55□□□□□ -0.56
CASC4-208ENST00000559151 HSPB2A8KAH6 182 aa11.55□□□□□ -0.56
CASC4-208ENST00000559151 STARD3NLO95772 234 aa11.55□□□□□ -0.56
CASC4-208ENST00000559151 CDAP32320 146 aa11.55□□□□□ -0.56
CASC4-208ENST00000559151 PSMB10P40306 273 aa11.55□□□□□ -0.56
CASC4-208ENST00000559151 CLCN5P51795 746 aa11.55□□□□□ -0.56
CASC4-208ENST00000559151 TMPRSS3P57727 454 aa11.55□□□□□ -0.56
CASC4-208ENST00000559151 GRIK3Q13003 919 aa11.55□□□□□ -0.56
CASC4-208ENST00000559151 HSPB2Q16082 182 aa11.55□□□□□ -0.56
CASC4-208ENST00000559151 SMTNL2Q2TAL5 461 aa11.55□□□□□ -0.56
CASC4-208ENST00000559151 COL28A1Q2UY09 1125 aa11.55□□□□□ -0.56
CASC4-208ENST00000559151 CPLX2Q6PUV4 134 aaKnown RBP11.55□□□□□ -0.56
CASC4-208ENST00000559151 RD3Q7Z3Z2 195 aa11.55□□□□□ -0.56
CASC4-208ENST00000559151 CALML4Q96GE6 196 aa11.55□□□□□ -0.56
CASC4-208ENST00000559151 KIF9Q9HAQ2 790 aa11.55□□□□□ -0.56
CASC4-208ENST00000559151 THSD1Q9NS62 852 aa11.55□□□□□ -0.56
CASC4-208ENST00000559151 RNF146Q9NTX7 359 aa11.55□□□□□ -0.56
CASC4-208ENST00000559151 PLK2Q9NYY3 685 aa11.55□□□□□ -0.56
CASC4-208ENST00000559151 SEL1LQ9UBV2 794 aa11.55□□□□□ -0.56
CASC4-208ENST00000559151 SMIM35A0A1B0GVV1 85 aa11.54□□□□□ -0.56
CASC4-208ENST00000559151 TYW5A2RUC4 315 aaKnown RBP11.54□□□□□ -0.56
CASC4-208ENST00000559151 C17orf102A2RUQ5 167 aa11.54□□□□□ -0.56
CASC4-208ENST00000559151 PPP6CO00743 305 aa11.54□□□□□ -0.56
CASC4-208ENST00000559151 PRPF4O43172 522 aaKnown RBP eCLIP11.54□□□□□ -0.56
CASC4-208ENST00000559151 TSPAN9O75954 239 aa11.54□□□□□ -0.56
CASC4-208ENST00000559151 TOP3BO95985 862 aaKnown RBP11.54□□□□□ -0.56
CASC4-208ENST00000559151 TNFSF8P32971 234 aa11.54□□□□□ -0.56
CASC4-208ENST00000559151 ACSL1P33121 698 aa11.54□□□□□ -0.56
CASC4-208ENST00000559151 RFC1P35251 1148 aaPredicted RBP11.54□□□□□ -0.56
CASC4-208ENST00000559151 TGFB2P61812 414 aa11.54□□□□□ -0.56
CASC4-208ENST00000559151 ZNF91Q05481 1191 aa11.54□□□□□ -0.56
CASC4-208ENST00000559151 CRYMQ14894 314 aa11.54□□□□□ -0.56
CASC4-208ENST00000559151 TMC8Q8IU68 726 aa11.54□□□□□ -0.56
CASC4-208ENST00000559151 C17orf53Q8N3J3 647 aaPredicted RBP11.54□□□□□ -0.56
CASC4-208ENST00000559151 SLC16A11Q8NCK7 471 aa11.54□□□□□ -0.56
CASC4-208ENST00000559151 POMGNT1Q8WZA1 660 aa11.54□□□□□ -0.56
CASC4-208ENST00000559151 SIGLEC11Q96RL6 698 aa11.54□□□□□ -0.56
CASC4-208ENST00000559151 SIN3AQ96ST3 1273 aa11.54□□□□□ -0.56
CASC4-208ENST00000559151 YME1L1Q96TA2 773 aa11.54□□□□□ -0.56
CASC4-208ENST00000559151 MXD3Q9BW11 206 aa11.54□□□□□ -0.56
CASC4-208ENST00000559151 QTRT1Q9BXR0 403 aaKnown RBP11.54□□□□□ -0.56
CASC4-208ENST00000559151 ASAH2Q9NR71 780 aa11.54□□□□□ -0.56
CASC4-208ENST00000559151 PLSCR4Q9NRQ2 329 aa11.54□□□□□ -0.56
CASC4-208ENST00000559151 ADARB2Q9NS39 739 aaKnown RBP11.54□□□□□ -0.56
CASC4-208ENST00000559151 SPATS2LQ9NUQ6 558 aaKnown RBP11.54□□□□□ -0.56
CASC4-208ENST00000559151 TMEM184CQ9NVA4 438 aa11.54□□□□□ -0.56
CASC4-208ENST00000559151 ABI3Q9P2A4 366 aa11.54□□□□□ -0.56
CASC4-208ENST00000559151 KLRF2D3W0D1 207 aa11.53□□□□□ -0.56
CASC4-208ENST00000559151 BCAR3O75815 825 aa11.53□□□□□ -0.56
CASC4-208ENST00000559151 SLPIP03973 132 aa11.53□□□□□ -0.56
CASC4-208ENST00000559151 KRT10P13645 584 aa11.53□□□□□ -0.56
CASC4-208ENST00000559151 UBA7P41226 1012 aa11.53□□□□□ -0.56
CASC4-208ENST00000559151 GPR12P47775 334 aa11.53□□□□□ -0.56
CASC4-208ENST00000559151 NHLH1Q02575 133 aa11.53□□□□□ -0.56
CASC4-208ENST00000559151 ASPHD1Q5U4P2 390 aa11.53□□□□□ -0.56
CASC4-208ENST00000559151 HORMAD2Q8N7B1 307 aa11.53□□□□□ -0.56
CASC4-208ENST00000559151 LSMEM1Q8N8F7 131 aa11.53□□□□□ -0.56
CASC4-208ENST00000559151 RNF183Q96D59 192 aa11.53□□□□□ -0.56
CASC4-208ENST00000559151 ZC3HAV1LQ96H79 300 aaKnown RBP11.53□□□□□ -0.56
CASC4-208ENST00000559151 SMARCAD1Q9H4L7 1026 aa11.53□□□□□ -0.56
CASC4-208ENST00000559151 SH2D4AQ9H788 454 aa11.53□□□□□ -0.56
CASC4-208ENST00000559151 RRP7BPQ9NSQ0 103 aa11.53□□□□□ -0.56
CASC4-208ENST00000559151 ARHGEF17Q96PE2 2063 aaPredicted RBP11.52□□□□□ -0.57
CASC4-208ENST00000559151 A0A1W2PRG0 241 aa11.52□□□□□ -0.57
CASC4-208ENST00000559151 BTBD18B2RXH4 712 aa11.52□□□□□ -0.57
CASC4-208ENST00000559151 HSPB6O14558 160 aa11.52□□□□□ -0.57
CASC4-208ENST00000559151 ATP2C2O75185 946 aa11.52□□□□□ -0.57
CASC4-208ENST00000559151 OR2C1O95371 312 aa11.52□□□□□ -0.57
CASC4-208ENST00000559151 MT-CYBP00156 380 aaPredicted RBP11.52□□□□□ -0.57
CASC4-208ENST00000559151 SRD5A1P18405 259 aa11.52□□□□□ -0.57
CASC4-208ENST00000559151 ITGAXP20702 1163 aa11.52□□□□□ -0.57
CASC4-208ENST00000559151 KRT20P35900 424 aa11.52□□□□□ -0.57
CASC4-208ENST00000559151 F2RL1P55085 397 aa11.52□□□□□ -0.57
CASC4-208ENST00000559151 C6orf10Q5SRN2 563 aa11.52□□□□□ -0.57
CASC4-208ENST00000559151 GKAP1Q5VSY0 366 aaPredicted RBP11.52□□□□□ -0.57
CASC4-208ENST00000559151 CES5AQ6NT32 575 aa11.52□□□□□ -0.57
CASC4-208ENST00000559151 TMEM154Q6P9G4 183 aa11.52□□□□□ -0.57
CASC4-208ENST00000559151 DBX2Q6ZNG2 339 aa11.52□□□□□ -0.57
CASC4-208ENST00000559151 GSTA5Q7RTV2 222 aa11.52□□□□□ -0.57
CASC4-208ENST00000559151 NOXA1Q86UR1 476 aa11.52□□□□□ -0.57
CASC4-208ENST00000559151 CNGA4Q8IV77 575 aa11.52□□□□□ -0.57
CASC4-208ENST00000559151 C1orf74Q96LT6 269 aa11.52□□□□□ -0.57
CASC4-208ENST00000559151 WDR83Q9BRX9 315 aaKnown RBP11.52□□□□□ -0.57
CASC4-208ENST00000559151 LHPPQ9H008 270 aa11.52□□□□□ -0.57
CASC4-208ENST00000559151 MVB12BQ9H7P6 319 aa11.52□□□□□ -0.57
CASC4-208ENST00000559151 NKIRAS2Q9NYR9 191 aa11.52□□□□□ -0.57
CASC4-208ENST00000559151 A0A0G2JK05 382 aa11.51□□□□□ -0.57
CASC4-208ENST00000559151 SEC14L5O43304 696 aa11.51□□□□□ -0.57
CASC4-208ENST00000559151 PCNAP12004 261 aa11.51□□□□□ -0.57
CASC4-208ENST00000559151 MCM3P25205 808 aa11.51□□□□□ -0.57
CASC4-208ENST00000559151 CERS1P27544 350 aa11.51□□□□□ -0.57
CASC4-208ENST00000559151 CXCR3P49682 368 aa11.51□□□□□ -0.57
CASC4-208ENST00000559151 ID2Q02363 134 aa11.51□□□□□ -0.57
CASC4-208ENST00000559151 GAD2Q05329 585 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms