RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 ITGAVP06756 1048 aa12.56□□□□□ -0.4
GABPB1-208ENST00000558970 CR2P20023 1033 aa12.56□□□□□ -0.4
GABPB1-208ENST00000558970 SERPINA4P29622 427 aa12.56□□□□□ -0.4
GABPB1-208ENST00000558970 ACTN2P35609 894 aa12.56□□□□□ -0.4
GABPB1-208ENST00000558970 COILP38432 576 aaPredicted RBP12.56□□□□□ -0.4
GABPB1-208ENST00000558970 TPMTP51580 245 aa12.56□□□□□ -0.4
GABPB1-208ENST00000558970 AP1S1P61966 158 aa12.56□□□□□ -0.4
GABPB1-208ENST00000558970 MRPS25P82663 173 aaKnown RBP12.56□□□□□ -0.4
GABPB1-208ENST00000558970 TRAF2Q12933 501 aa12.56□□□□□ -0.4
GABPB1-208ENST00000558970 IHHQ14623 411 aa12.56□□□□□ -0.4
GABPB1-208ENST00000558970 TTC31Q49AM3 519 aaPredicted RBP12.56□□□□□ -0.4
GABPB1-208ENST00000558970 FAM46CQ5VWP2 391 aa12.56□□□□□ -0.4
GABPB1-208ENST00000558970 PARS2Q7L3T8 475 aaKnown RBP12.56□□□□□ -0.4
GABPB1-208ENST00000558970 CAMKK1Q8N5S9 505 aa12.56□□□□□ -0.4
GABPB1-208ENST00000558970 DEFB119Q8N690 84 aa12.56□□□□□ -0.4
GABPB1-208ENST00000558970 ARRDC2Q8TBH0 407 aa12.56□□□□□ -0.4
GABPB1-208ENST00000558970 FATE1Q969F0 183 aa12.56□□□□□ -0.4
GABPB1-208ENST00000558970 FRMD8P1Q9BZ68 369 aaPredicted RBP12.56□□□□□ -0.4
GABPB1-208ENST00000558970 PABPC3Q9H361 631 aaKnown RBP12.56□□□□□ -0.4
GABPB1-208ENST00000558970 HAUS2Q9NVX0 235 aa12.56□□□□□ -0.4
GABPB1-208ENST00000558970 FBXL12Q9NXK8 326 aa12.56□□□□□ -0.4
GABPB1-208ENST00000558970 RAI2Q9Y5P3 530 aa12.56□□□□□ -0.4
GABPB1-208ENST00000558970 DOCK9Q9BZ29 2069 aa12.56□□□□□ -0.4
GABPB1-208ENST00000558970 NUMA1Q14980 2115 aa12.56□□□□□ -0.4
GABPB1-208ENST00000558970 PLXNA2O75051 1894 aa12.55□□□□□ -0.4
GABPB1-208ENST00000558970 A8MX80 341 aa12.55□□□□□ -0.4
GABPB1-208ENST00000558970 H0Y858 1186 aa12.55□□□□□ -0.4
GABPB1-208ENST00000558970 GALR2O43603 387 aaPredicted RBP12.55□□□□□ -0.4
GABPB1-208ENST00000558970 MMP2P08253 660 aa12.55□□□□□ -0.4
GABPB1-208ENST00000558970 SERPINF2P08697 491 aa12.55□□□□□ -0.4
GABPB1-208ENST00000558970 SP9P0CG40 484 aa12.55□□□□□ -0.4
GABPB1-208ENST00000558970 TDGF1P13385 188 aa12.55□□□□□ -0.4
GABPB1-208ENST00000558970 ITIH2P19823 946 aa12.55□□□□□ -0.4
GABPB1-208ENST00000558970 C5AR1P21730 350 aa12.55□□□□□ -0.4
GABPB1-208ENST00000558970 XPAP23025 273 aaPredicted RBP12.55□□□□□ -0.4
GABPB1-208ENST00000558970 NSUN2Q08J23 767 aaKnown RBP eCLIP12.55□□□□□ -0.4
GABPB1-208ENST00000558970 OLIG2Q13516 323 aa12.55□□□□□ -0.4
GABPB1-208ENST00000558970 GALNT3Q14435 633 aa12.55□□□□□ -0.4
GABPB1-208ENST00000558970 ITPRIPL1Q6GPH6 555 aa12.55□□□□□ -0.4
GABPB1-208ENST00000558970 FBXL19Q6PCT2 694 aa12.55□□□□□ -0.4
GABPB1-208ENST00000558970 RASSF3Q86WH2 238 aa12.55□□□□□ -0.4
GABPB1-208ENST00000558970 ZSWIM9Q86XI8 627 aa12.55□□□□□ -0.4
GABPB1-208ENST00000558970 C12orf50Q8NA57 414 aaPredicted RBP12.55□□□□□ -0.4
GABPB1-208ENST00000558970 TMIEQ8NEW7 156 aa12.55□□□□□ -0.4
GABPB1-208ENST00000558970 IPMKQ8NFU5 416 aa12.55□□□□□ -0.4
GABPB1-208ENST00000558970 VOPP1Q96AW1 172 aa12.55□□□□□ -0.4
GABPB1-208ENST00000558970 PPP1R16AQ96I34 528 aa12.55□□□□□ -0.4
GABPB1-208ENST00000558970 SPATA13Q96N96 652 aa12.55□□□□□ -0.4
GABPB1-208ENST00000558970 SMIM14Q96QK8 99 aa12.55□□□□□ -0.4
GABPB1-208ENST00000558970 KRT12Q99456 494 aa12.55□□□□□ -0.4
GABPB1-208ENST00000558970 VAT1Q99536 393 aa12.55□□□□□ -0.4
GABPB1-208ENST00000558970 SLC25A51Q9H1U9 297 aa12.55□□□□□ -0.4
GABPB1-208ENST00000558970 GBA3Q9H227 469 aa12.55□□□□□ -0.4
GABPB1-208ENST00000558970 SUV39H2Q9H5I1 410 aa12.55□□□□□ -0.4
GABPB1-208ENST00000558970 FBRSQ9HAH7 460 aa12.55□□□□□ -0.4
GABPB1-208ENST00000558970 HOMER3Q9NSC5 361 aa12.55□□□□□ -0.4
GABPB1-208ENST00000558970 GGT7Q9UJ14 662 aa12.55□□□□□ -0.4
GABPB1-208ENST00000558970 CDC23Q9UJX2 597 aa12.55□□□□□ -0.4
GABPB1-208ENST00000558970 TRHDEQ9UKU6 1024 aa12.55□□□□□ -0.4
GABPB1-208ENST00000558970 CHKBQ9Y259 395 aa12.55□□□□□ -0.4
GABPB1-208ENST00000558970 ITM2BQ9Y287 266 aa12.55□□□□□ -0.4
GABPB1-208ENST00000558970 PCDHB9Q9Y5E1 797 aa12.55□□□□□ -0.4
GABPB1-208ENST00000558970 SPTBN4Q9H254 2564 aa12.55□□□□□ -0.4
GABPB1-208ENST00000558970 FAM186AA6NE01 2351 aa12.55□□□□□ -0.4
GABPB1-208ENST00000558970 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.54□□□□□ -0.4
GABPB1-208ENST00000558970 C5orf60A6NFR6 353 aa12.54□□□□□ -0.4
GABPB1-208ENST00000558970 GOLGA8CPA6NN73 597 aa12.54□□□□□ -0.4
GABPB1-208ENST00000558970 C16orf96A6NNT2 1141 aa12.54□□□□□ -0.4
GABPB1-208ENST00000558970 GFRA3O60609 400 aa12.54□□□□□ -0.4
GABPB1-208ENST00000558970 PAPSS2O95340 614 aaPredicted RBP12.54□□□□□ -0.4
GABPB1-208ENST00000558970 METTL18O95568 372 aa12.54□□□□□ -0.4
GABPB1-208ENST00000558970 CPP00450 1065 aa12.54□□□□□ -0.4
GABPB1-208ENST00000558970 TUBB4AP04350 444 aa12.54□□□□□ -0.4
GABPB1-208ENST00000558970 PDHA1P08559 390 aa12.54□□□□□ -0.4
GABPB1-208ENST00000558970 CTPS1P17812 591 aa12.54□□□□□ -0.4
GABPB1-208ENST00000558970 ITGB7P26010 798 aa12.54□□□□□ -0.4
GABPB1-208ENST00000558970 ACSL1P33121 698 aa12.54□□□□□ -0.4
GABPB1-208ENST00000558970 DRD3P35462 400 aa12.54□□□□□ -0.4
GABPB1-208ENST00000558970 P2RY2P41231 377 aa12.54□□□□□ -0.4
GABPB1-208ENST00000558970 CSNK1DP48730 415 aa12.54□□□□□ -0.4
GABPB1-208ENST00000558970 SKOR1P84550 965 aa12.54□□□□□ -0.4
GABPB1-208ENST00000558970 SPARCL1Q14515 664 aa12.54□□□□□ -0.4
GABPB1-208ENST00000558970 PTPRRQ15256 657 aa12.54□□□□□ -0.4
GABPB1-208ENST00000558970 CYP1B1Q16678 543 aa12.54□□□□□ -0.4
GABPB1-208ENST00000558970 ZNF805Q5CZA5 627 aa12.54□□□□□ -0.4
GABPB1-208ENST00000558970 DRICH1Q6PGQ1 229 aaPredicted RBP12.54□□□□□ -0.4
GABPB1-208ENST00000558970 ERN2Q76MJ5 926 aaKnown RBP12.54□□□□□ -0.4
GABPB1-208ENST00000558970 TTC7BQ86TV6 843 aa12.54□□□□□ -0.4
GABPB1-208ENST00000558970 PRPF39Q86UA1 669 aaKnown RBP12.54□□□□□ -0.4
GABPB1-208ENST00000558970 PLPP6Q8IY26 295 aa12.54□□□□□ -0.4
GABPB1-208ENST00000558970 SLC25A41Q8N5S1 370 aa12.54□□□□□ -0.4
GABPB1-208ENST00000558970 LPCAT1Q8NF37 534 aa12.54□□□□□ -0.4
GABPB1-208ENST00000558970 OR14C36Q8NHC7 312 aa12.54□□□□□ -0.4
GABPB1-208ENST00000558970 ATL2Q8NHH9 583 aa12.54□□□□□ -0.4
GABPB1-208ENST00000558970 IMP4Q96G21 291 aaKnown RBP12.54□□□□□ -0.4
GABPB1-208ENST00000558970 OXNAD1Q96HP4 312 aaPredicted RBP12.54□□□□□ -0.4
GABPB1-208ENST00000558970 TUBGCP5Q96RT8 1024 aa12.54□□□□□ -0.4
GABPB1-208ENST00000558970 APOL2Q9BQE5 337 aa12.54□□□□□ -0.4
GABPB1-208ENST00000558970 GORASP1Q9BQQ3 440 aa12.54□□□□□ -0.4
GABPB1-208ENST00000558970 MLPHQ9BV36 600 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms