RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 SPOCD1Q6ZMY3 1216 aa13.99□□□□□ -0.17
TSPAN3-205ENST00000558745 TTC7BQ86TV6 843 aa13.99□□□□□ -0.17
TSPAN3-205ENST00000558745 LRRC8AQ8IWT6 810 aa13.99□□□□□ -0.17
TSPAN3-205ENST00000558745 PPP1R16AQ96I34 528 aa13.99□□□□□ -0.17
TSPAN3-205ENST00000558745 LRIG1Q96JA1 1093 aa13.99□□□□□ -0.17
TSPAN3-205ENST00000558745 LGMNQ99538 433 aa13.99□□□□□ -0.17
TSPAN3-205ENST00000558745 CPEB1Q9BZB8 566 aaKnown RBP13.99□□□□□ -0.17
TSPAN3-205ENST00000558745 SUV39H2Q9H5I1 410 aa13.99□□□□□ -0.17
TSPAN3-205ENST00000558745 IL21RQ9HBE5 538 aa13.99□□□□□ -0.17
TSPAN3-205ENST00000558745 NT5MQ9NPB1 228 aa13.99□□□□□ -0.17
TSPAN3-205ENST00000558745 FZD3Q9NPG1 666 aa13.99□□□□□ -0.17
TSPAN3-205ENST00000558745 DDX56Q9NY93 547 aaKnown RBP13.99□□□□□ -0.17
TSPAN3-205ENST00000558745 SUSD2Q9UGT4 822 aa13.99□□□□□ -0.17
TSPAN3-205ENST00000558745 SEPT3Q9UH03 358 aa13.99□□□□□ -0.17
TSPAN3-205ENST00000558745 ADGRG1Q9Y653 693 aa13.99□□□□□ -0.17
TSPAN3-205ENST00000558745 MAP1BP46821 2468 aaKnown RBP13.99□□□□□ -0.17
TSPAN3-205ENST00000558745 PLXNA2O75051 1894 aa13.98□□□□□ -0.17
TSPAN3-205ENST00000558745 BTNL10A8MVZ5 291 aa13.98□□□□□ -0.17
TSPAN3-205ENST00000558745 APOL1O14791 398 aa13.98□□□□□ -0.17
TSPAN3-205ENST00000558745 LATO43561 262 aa13.98□□□□□ -0.17
TSPAN3-205ENST00000558745 PSTPIP1O43586 416 aa13.98□□□□□ -0.17
TSPAN3-205ENST00000558745 HOXD12P35452 270 aa13.98□□□□□ -0.17
TSPAN3-205ENST00000558745 DPP6P42658 865 aa13.98□□□□□ -0.17
TSPAN3-205ENST00000558745 CDKN2BP42772 138 aa13.98□□□□□ -0.17
TSPAN3-205ENST00000558745 KIF5AQ12840 1032 aa13.98□□□□□ -0.17
TSPAN3-205ENST00000558745 GRIK2Q13002 908 aa13.98□□□□□ -0.17
TSPAN3-205ENST00000558745 FGL2Q14314 439 aa13.98□□□□□ -0.17
TSPAN3-205ENST00000558745 ZNF235Q14590 738 aa13.98□□□□□ -0.17
TSPAN3-205ENST00000558745 IHHQ14623 411 aa13.98□□□□□ -0.17
TSPAN3-205ENST00000558745 RFTN1Q14699 578 aaPredicted RBP13.98□□□□□ -0.17
TSPAN3-205ENST00000558745 KIF19Q2TAC6 998 aa13.98□□□□□ -0.17
TSPAN3-205ENST00000558745 MARC1Q5VT66 337 aa13.98□□□□□ -0.17
TSPAN3-205ENST00000558745 KDM7AQ6ZMT4 941 aa13.98□□□□□ -0.17
TSPAN3-205ENST00000558745 PRPF39Q86UA1 669 aaKnown RBP13.98□□□□□ -0.17
TSPAN3-205ENST00000558745 HORMAD1Q86X24 394 aa13.98□□□□□ -0.17
TSPAN3-205ENST00000558745 CCNYQ8ND76 341 aa13.98□□□□□ -0.17
TSPAN3-205ENST00000558745 KIAA1524Q8TCG1 905 aa13.98□□□□□ -0.17
TSPAN3-205ENST00000558745 NETO1Q8TDF5 533 aa13.98□□□□□ -0.17
TSPAN3-205ENST00000558745 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.98□□□□□ -0.17
TSPAN3-205ENST00000558745 SERAC1Q96JX3 654 aa13.98□□□□□ -0.17
TSPAN3-205ENST00000558745 ZNF599Q96NL3 588 aa13.98□□□□□ -0.17
TSPAN3-205ENST00000558745 PSKH2Q96QS6 385 aa13.98□□□□□ -0.17
TSPAN3-205ENST00000558745 HERPUD2Q9BSE4 406 aa13.98□□□□□ -0.17
TSPAN3-205ENST00000558745 HEMGNQ9BXL5 484 aa13.98□□□□□ -0.17
TSPAN3-205ENST00000558745 CAAP1Q9H8G2 361 aa13.98□□□□□ -0.17
TSPAN3-205ENST00000558745 PREBQ9HCU5 417 aa13.98□□□□□ -0.17
TSPAN3-205ENST00000558745 AASDHPPTQ9NRN7 309 aa13.98□□□□□ -0.17
TSPAN3-205ENST00000558745 PACSIN2Q9UNF0 486 aaPredicted RBP13.98□□□□□ -0.17
TSPAN3-205ENST00000558745 PCDHGC4Q9Y5F7 938 aa13.98□□□□□ -0.17
TSPAN3-205ENST00000558745 SNX11Q9Y5W9 270 aa13.98□□□□□ -0.17
TSPAN3-205ENST00000558745 IGLON5A6NGN9 336 aa13.97□□□□□ -0.17
TSPAN3-205ENST00000558745 MATN3O15232 486 aa13.97□□□□□ -0.17
TSPAN3-205ENST00000558745 CST8O60676 142 aa13.97□□□□□ -0.17
TSPAN3-205ENST00000558745 MMP20O60882 483 aa13.97□□□□□ -0.17
TSPAN3-205ENST00000558745 ZRANB2O95218 330 aaKnown RBP eCLIP13.97□□□□□ -0.17
TSPAN3-205ENST00000558745 PAK4O96013 591 aaPredicted RBP13.97□□□□□ -0.17
TSPAN3-205ENST00000558745 CR2P20023 1033 aa13.97□□□□□ -0.17
TSPAN3-205ENST00000558745 MMP13P45452 471 aa13.97□□□□□ -0.17
TSPAN3-205ENST00000558745 CSNK1DP48730 415 aa13.97□□□□□ -0.17
TSPAN3-205ENST00000558745 ITKQ08881 620 aa13.97□□□□□ -0.17
TSPAN3-205ENST00000558745 NSUN2Q08J23 767 aaKnown RBP eCLIP13.97□□□□□ -0.17
TSPAN3-205ENST00000558745 COL9A2Q14055 689 aaPredicted RBP13.97□□□□□ -0.17
TSPAN3-205ENST00000558745 PTPRRQ15256 657 aa13.97□□□□□ -0.17
TSPAN3-205ENST00000558745 IFI16Q16666 785 aaKnown RBP13.97□□□□□ -0.17
TSPAN3-205ENST00000558745 ZNF284Q2VY69 593 aa13.97□□□□□ -0.17
TSPAN3-205ENST00000558745 TRIM69Q86WT6 500 aa13.97□□□□□ -0.17
TSPAN3-205ENST00000558745 CCDC50Q8IVM0 306 aa13.97□□□□□ -0.17
TSPAN3-205ENST00000558745 KATNAL2Q8IYT4 538 aa13.97□□□□□ -0.17
TSPAN3-205ENST00000558745 LRRC57Q8N9N7 239 aa13.97□□□□□ -0.17
TSPAN3-205ENST00000558745 NSMCE1Q8WV22 266 aa13.97□□□□□ -0.17
TSPAN3-205ENST00000558745 HAUS1Q96CS2 278 aa13.97□□□□□ -0.17
TSPAN3-205ENST00000558745 OSBPL1AQ9BXW6 950 aa13.97□□□□□ -0.17
TSPAN3-205ENST00000558745 KDM4CQ9H3R0 1056 aa13.97□□□□□ -0.17
TSPAN3-205ENST00000558745 NOD2Q9HC29 1040 aa13.97□□□□□ -0.17
TSPAN3-205ENST00000558745 TMEM9BQ9NQ34 198 aa13.97□□□□□ -0.17
TSPAN3-205ENST00000558745 RBM22Q9NW64 420 aaKnown RBP eCLIP13.97□□□□□ -0.17
TSPAN3-205ENST00000558745 CDV3Q9UKY7 258 aaKnown RBP13.97□□□□□ -0.17
TSPAN3-205ENST00000558745 PCDH15Q96QU1 1955 aa13.97□□□□□ -0.17
TSPAN3-205ENST00000558745 hCG_1818297A0A087WSY0 165 aa13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 A0A1W2PR77 199 aa13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 GOLGA8CPA6NN73 597 aa13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 A8MX80 341 aa13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 H0Y8X5 98 aa13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 KCNK1O00180 336 aa13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 NEMP1O14524 444 aa13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 SLC30A4O14863 429 aa13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 RAD51BO15315 384 aa13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 FTCDO95954 541 aa13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 JCHAINP01591 159 aa13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 PECAM1P16284 738 aaPredicted RBP13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 CCNCP24863 283 aa13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 PEX5P50542 639 aa13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 RENBPP51606 427 aa13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 AFF3P51826 1226 aaKnown RBP13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 ATXN3P54252 364 aaPredicted RBP13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 CLDN2P57739 230 aa13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 RACK1P63244 317 aaKnown RBP13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 CCZ1BP86790 482 aa13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 CCZ1P86791 482 aaPredicted RBP13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 BCL2L1Q07817 233 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms