RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 VCX3BQ9H321 246 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 PABPC3Q9H361 631 aaKnown RBP3.38□□□□□ -1.87
HERC1-203ENST00000558532 MMADHCQ9H3L0 296 aaPredicted RBP3.38□□□□□ -1.87
HERC1-203ENST00000558532 CUEDC2Q9H467 287 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 ECT2Q9H8V3 914 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 GLOD4Q9HC38 313 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 METTL14Q9HCE5 456 aaKnown RBP3.38□□□□□ -1.87
HERC1-203ENST00000558532 POLD4Q9HCU8 107 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 VCX3AQ9NNX9 186 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 NLRC4Q9NPP4 1024 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 PRDM11Q9NQV5 511 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 DUSP22Q9NRW4 184 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 SACM1LQ9NTJ5 587 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 ZDHHC18Q9NUE0 388 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 DDX43Q9NXZ2 648 aaKnown RBP3.38□□□□□ -1.87
HERC1-203ENST00000558532 SMARCAL1Q9NZC9 954 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 IL1RAPL1Q9NZN1 696 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 EHD2Q9NZN4 543 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 COL20A1Q9P218 1284 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 DNMT3BQ9UBC3 853 aaKnown RBP3.38□□□□□ -1.87
HERC1-203ENST00000558532 AFF4Q9UHB7 1163 aaKnown RBP3.38□□□□□ -1.87
HERC1-203ENST00000558532 FBXL5Q9UKA1 691 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 FRMD4BQ9Y2L6 1034 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 WNT6Q9Y6F9 365 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 COMMD3-BMI1R4GMX3 469 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 TNRC6CQ9HCJ0 1690 aaKnown RBP3.38□□□□□ -1.87
HERC1-203ENST00000558532 MYH3P11055 1940 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 KIAA1551Q9HCM1 1747 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 TMEM2Q9UHN6 1383 aa3.38□□□□□ -1.87
HERC1-203ENST00000558532 SCN7AQ01118 1682 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 A0A1B0GVG6 124 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 BICDL2A1A5D9 508 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 MAGEA13PA6NCF6 341 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 TRIM49BA6NDI0 452 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 CGB1A6NKQ9 187 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 LRRC53A6NM62 1247 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 CCDC169A6NNP5 214 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 A8MUI8 341 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 PYCARD-AS1I3L0S3 204 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 EYA2O00167 538 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 PGRMC1O00264 195 aaKnown RBP3.37□□□□□ -1.87
HERC1-203ENST00000558532 BIRC5O15392 142 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 MAGEB2O15479 319 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 NCK2O43639 380 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 TCEA3O75764 348 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 TMCC1O94876 653 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 PARNO95453 639 aaKnown RBP3.37□□□□□ -1.87
HERC1-203ENST00000558532 VNN1O95497 513 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 ONECUT2O95948 504 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 AFPP02771 609 aaKnown RBP3.37□□□□□ -1.87
HERC1-203ENST00000558532 HNRNPCP07910 306 aaKnown RBP eCLIP3.37□□□□□ -1.87
HERC1-203ENST00000558532 PLEKP08567 350 aaPredicted RBP3.37□□□□□ -1.87
HERC1-203ENST00000558532 IFIT1P09914 478 aaKnown RBP3.37□□□□□ -1.87
HERC1-203ENST00000558532 PABPC4LP0CB38 370 aaKnown RBP3.37□□□□□ -1.87
HERC1-203ENST00000558532 NDUFB7P17568 137 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 GM2AP17900 193 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 KLRC1P26715 233 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 CTGFP29279 349 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 CASP1P29466 404 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 CDC25CP30307 473 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 CYP2C18P33260 490 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 ADD2P35612 726 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 KRT2P35908 639 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 VHLP40337 213 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 SLC1A4P43007 532 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 MAGEA1P43355 309 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 RANBP1P43487 201 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 PTENP60484 403 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 RPL26P61254 145 aaKnown RBP3.37□□□□□ -1.87
HERC1-203ENST00000558532 RPS16P62249 146 aaKnown RBP3.37□□□□□ -1.87
HERC1-203ENST00000558532 FMO1Q01740 532 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 TFF2Q03403 129 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 KLRC3Q07444 240 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 GIT2Q14161 759 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 KPNB1Q14974 876 aaKnown RBP3.37□□□□□ -1.87
HERC1-203ENST00000558532 TRADDQ15628 312 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 SLC18A3Q16572 532 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 LY6KQ17RY6 165 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 PTCHD3Q3KNS1 767 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 USH1GQ495M9 461 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 SLC44A4Q53GD3 710 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 AARS2Q5JTZ9 985 aaKnown RBP3.37□□□□□ -1.87
HERC1-203ENST00000558532 FAM91A1Q658Y4 838 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 TBC1D9BQ66K14 1250 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 DUPD1Q68J44 220 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 FCRLBQ6BAA4 426 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 CENPPQ6IPU0 288 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 CGB2Q6NT52 195 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 DARS2Q6PI48 645 aaKnown RBP3.37□□□□□ -1.87
HERC1-203ENST00000558532 WDR53Q7Z5U6 358 aaPredicted RBP3.37□□□□□ -1.87
HERC1-203ENST00000558532 KCTD20Q7Z5Y7 419 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 ZC3H3Q8IXZ2 948 aaKnown RBP3.37□□□□□ -1.87
HERC1-203ENST00000558532 ABRAQ8N0Z2 381 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 SRBD1Q8N5C6 995 aaKnown RBP3.37□□□□□ -1.87
HERC1-203ENST00000558532 C4orf32Q8N8J7 132 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 NEK9Q8TD19 979 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 PIGOQ8TEQ8 1089 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 OSCP1Q8WVF1 389 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 CKAP2Q8WWK9 683 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 DNAJC9Q8WXX5 260 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms