RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 SEPT6Q14141 434 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 ARHGEF7Q14155 803 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 ZNF805Q5CZA5 627 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 TPRG1LQ5T0D9 272 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 PHF19Q5T6S3 580 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 ACBD5Q5T8D3 534 aaPredicted RBP5.26□□□□□ -1.57
SPG11-208ENST00000558155 FHL5Q5TD97 284 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 C22orf39Q6P5X5 142 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 OGFOD3Q6PK18 319 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 ENPP7Q6UWV6 458 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 LINGO4Q6UY18 593 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 ZNF783Q6ZMS7 281 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 MACC1Q6ZN28 852 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 RD3Q7Z3Z2 195 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 TTC7BQ86TV6 843 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 PIM3Q86V86 326 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 VPS36Q86VN1 386 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 HID1Q8IV36 788 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 DEFB106AQ8N104 65 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 PPM1KQ8N3J5 372 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 RYBPQ8N488 228 aaPredicted RBP5.26□□□□□ -1.57
SPG11-208ENST00000558155 PCDH20Q8N6Y1 951 aaKnown RBP5.26□□□□□ -1.57
SPG11-208ENST00000558155 DCAF4L2Q8NA75 395 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 KYQ8NBH2 561 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 ATL2Q8NHH9 583 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 C9orf43Q8TAL5 461 aaPredicted RBP5.26□□□□□ -1.57
SPG11-208ENST00000558155 CXorf40AQ8TE69 158 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 NKD1Q969G9 470 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 TSACCQ96A04 125 aaPredicted RBP5.26□□□□□ -1.57
SPG11-208ENST00000558155 TAAR9Q96RI9 348 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 HAPLN3Q96S86 360 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 PSMB7Q99436 277 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 TSG101Q99816 390 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 ZSWIM1Q9BR11 485 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 SPON2Q9BUD6 331 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 EFHD1Q9BUP0 239 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 WDCPQ9H6R7 721 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 METTL14Q9HCE5 456 aaKnown RBP5.26□□□□□ -1.57
SPG11-208ENST00000558155 ZNF71Q9NQZ8 489 aaPredicted RBP5.26□□□□□ -1.57
SPG11-208ENST00000558155 ASNSD1Q9NWL6 643 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 FOXJ2Q9P0K8 574 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 HECAQ9UBI9 543 aaPredicted RBP5.26□□□□□ -1.57
SPG11-208ENST00000558155 PLEKHB1Q9UF11 243 aaPredicted RBP5.26□□□□□ -1.57
SPG11-208ENST00000558155 ARMCX3Q9UH62 379 aaPredicted RBP5.26□□□□□ -1.57
SPG11-208ENST00000558155 RCOR1Q9UKL0 485 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 PLAAQ9Y263 795 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 HS3ST4Q9Y661 456 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 RNF215Q9Y6U7 377 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 ICE1Q9Y2F5 2266 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 NBASA2RRP1 2371 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 A0A0D9SEW6 157 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 A0A1B0GVL5 298 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 ILVBLA1L0T0 632 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 DRGXA6NNA5 263 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 E5RJQ4 531 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 RNF103O00237 685 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 PMM2O15305 246 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 SLC16A3O15427 465 aaKnown RBP5.25□□□□□ -1.57
SPG11-208ENST00000558155 P4HA2O15460 535 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 MMP20O60882 483 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 HSF2BPO75031 334 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 ZNF821O75541 412 aaPredicted RBP5.25□□□□□ -1.57
SPG11-208ENST00000558155 CNTN5O94779 1100 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 ADCY5O95622 1261 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 POP4O95707 220 aaKnown RBP5.25□□□□□ -1.57
SPG11-208ENST00000558155 CPNE6O95741 557 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 F9P00740 461 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 OR1E1P30953 314 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 SYKP43405 635 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 CD97P48960 835 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 FMO5P49326 533 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 SERPINH1P50454 418 aaKnown RBP5.25□□□□□ -1.57
SPG11-208ENST00000558155 CCNHP51946 323 aaPredicted RBP5.25□□□□□ -1.57
SPG11-208ENST00000558155 SRP54P61011 504 aaKnown RBP5.25□□□□□ -1.57
SPG11-208ENST00000558155 SNRPD1P62314 119 aaKnown RBP5.25□□□□□ -1.57
SPG11-208ENST00000558155 PITX1P78337 314 aaPredicted RBP5.25□□□□□ -1.57
SPG11-208ENST00000558155 MC1RQ01726 317 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 RAD51Q06609 339 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 DPYDQ12882 1025 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 POLD3Q15054 466 aaPredicted RBP5.25□□□□□ -1.57
SPG11-208ENST00000558155 TAF5Q15542 800 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 MEA1Q16626 185 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 CLPPQ16740 277 aaPredicted RBP5.25□□□□□ -1.57
SPG11-208ENST00000558155 FOXD4L6Q3SYB3 417 aaPredicted RBP5.25□□□□□ -1.57
SPG11-208ENST00000558155 ZCWPW2Q504Y3 356 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 ALFQ53S48 1182 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 FOXD4L5Q5VV16 416 aaPredicted RBP5.25□□□□□ -1.57
SPG11-208ENST00000558155 DENND1BQ6P3S1 775 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 FOXD4L3Q6VB84 417 aaPredicted RBP5.25□□□□□ -1.57
SPG11-208ENST00000558155 PARS2Q7L3T8 475 aaKnown RBP5.25□□□□□ -1.57
SPG11-208ENST00000558155 RRAGAQ7L523 313 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 TAF8Q7Z7C8 310 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 TEX19Q8NA77 164 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 CCDC112Q8NEF3 446 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 FAM46DQ8NEK8 389 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 GPR156Q8NFN8 814 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 PCDH19Q8TAB3 1148 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 APOBEC4Q8WW27 367 aaKnown RBP5.25□□□□□ -1.57
SPG11-208ENST00000558155 ZNF606Q8WXB4 792 aa5.25□□□□□ -1.57
SPG11-208ENST00000558155 JPH3Q8WXH2 748 aaPredicted RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms